A citation-based method for searching scientific literature

M P Rubtsova, D P Vasilkova, M A Moshareva, A N Malyavko, M B Meerson, T S Zatsepin, Y V Naraykina, A V Beletsky, N V Ravin, O A Dontsova. Sci Rep 2019
Times Cited: 11







List of co-cited articles
160 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Integrator, a multiprotein mediator of small nuclear RNA processing, associates with the C-terminal repeat of RNA polymerase II.
David Baillat, Mohamed-Ali Hakimi, Anders M Näär, Ali Shilatifard, Neil Cooch, Ramin Shiekhattar. Cell 2005
280
81

The host Integrator complex acts in transcription-independent maturation of herpesvirus microRNA 3' ends.
Mingyi Xie, Wei Zhang, Mei-Di Shu, Acer Xu, Diana A Lenis, Daniel DiMaio, Joan A Steitz. Genes Dev 2015
25
72

Integrator mediates the biogenesis of enhancer RNAs.
Fan Lai, Alessandro Gardini, Anda Zhang, Ramin Shiekhattar. Nature 2015
127
72

Integrator: surprisingly diverse functions in gene expression.
David Baillat, Eric J Wagner. Trends Biochem Sci 2015
47
72

The Integrator complex controls the termination of transcription at diverse classes of gene targets.
Jeffrey R Skaar, Andrea L Ferris, Xiaolin Wu, Anita Saraf, Kum Kum Khanna, Laurence Florens, Michael P Washburn, Stephen H Hughes, Michele Pagano. Cell Res 2015
58
72

Integrator subunit 4 is a 'Symplekin-like' scaffold that associates with INTS9/11 to form the Integrator cleavage module.
Todd R Albrecht, Sergey P Shevtsov, Yixuan Wu, Lauren G Mascibroda, Natoya J Peart, Kai-Lieh Huang, Iain A Sawyer, Liang Tong, Miroslav Dundr, Eric J Wagner. Nucleic Acids Res 2018
21
63

Molecular basis for the interaction between Integrator subunits IntS9 and IntS11 and its functional importance.
Yixuan Wu, Todd R Albrecht, David Baillat, Eric J Wagner, Liang Tong. Proc Natl Acad Sci U S A 2017
22
63

A primate herpesvirus uses the integrator complex to generate viral microRNAs.
Demián Cazalla, Mingyi Xie, Joan A Steitz. Mol Cell 2011
73
63

Integrator complex regulates NELF-mediated RNA polymerase II pause/release and processivity at coding genes.
Bernd Stadelmayer, Gaël Micas, Adrien Gamot, Pascal Martin, Nathalie Malirat, Slavik Koval, Raoul Raffel, Bijan Sobhian, Dany Severac, Stéphanie Rialle,[...]. Nat Commun 2014
73
63

Integrator regulates transcriptional initiation and pause release following activation.
Alessandro Gardini, David Baillat, Matteo Cesaroni, Deqing Hu, Jill M Marinis, Eric J Wagner, Mitchell A Lazar, Ali Shilatifard, Ramin Shiekhattar. Mol Cell 2014
84
63

The Integrator complex cleaves nascent mRNAs to attenuate transcription.
Deirdre C Tatomer, Nathan D Elrod, Dongming Liang, Mei-Sheng Xiao, Jeffrey Z Jiang, Michael Jonathan, Kai-Lieh Huang, Eric J Wagner, Sara Cherry, Jeremy E Wilusz. Genes Dev 2019
28
63

The Integrator Complex Attenuates Promoter-Proximal Transcription at Protein-Coding Genes.
Nathan D Elrod, Telmo Henriques, Kai-Lieh Huang, Deirdre C Tatomer, Jeremy E Wilusz, Eric J Wagner, Karen Adelman. Mol Cell 2019
32
63

Targeted Enhancer Activation by a Subunit of the Integrator Complex.
Elisa Barbieri, Marco Trizzino, Sarah Ann Welsh, Tori Alexandra Owens, Bruno Calabretta, Martin Carroll, Kavitha Sarma, Alessandro Gardini. Mol Cell 2018
17
54

Integrator complex and transcription regulation: Recent findings and pathophysiology.
Monica Rienzo, Amelia Casamassimi. Biochim Biophys Acta 2016
25
54

Disruption of the Caenorhabditis elegans Integrator complex triggers a non-conventional transcriptional mechanism beyond snRNA genes.
Eva Gómez-Orte, Beatriz Sáenz-Narciso, Angelina Zheleva, Begoña Ezcurra, María de Toro, Rosario López, Irene Gastaca, Hilde Nilsen, María P Sacristán, Ralf Schnabel,[...]. PLoS Genet 2019
12
45

An RNAi screen identifies additional members of the Drosophila Integrator complex and a requirement for cyclin C/Cdk8 in snRNA 3'-end formation.
Jiandong Chen, Nader Ezzeddine, Bernhard Waltenspiel, Todd R Albrecht, William D Warren, William F Marzluff, Eric J Wagner. RNA 2012
38
45

A subset of Drosophila integrator proteins is essential for efficient U7 snRNA and spliceosomal snRNA 3'-end formation.
Nader Ezzeddine, Jiandong Chen, Bernhard Waltenspiel, Brandon Burch, Todd Albrecht, Ming Zhuo, William D Warren, William F Marzluff, Eric J Wagner. Mol Cell Biol 2011
57
45

The taste of heavy metals: gene regulation by MTF-1.
Viola Günther, Uschi Lindert, Walter Schaffner. Biochim Biophys Acta 2012
168
36

Interaction profiling identifies the human nuclear exosome targeting complex.
Michal Lubas, Marianne S Christensen, Maiken S Kristiansen, Michal Domanski, Lasse G Falkenby, Søren Lykke-Andersen, Jens S Andersen, Andrzej Dziembowski, Torben Heick Jensen. Mol Cell 2011
243
36


Deregulated Expression of Mammalian lncRNA through Loss of SPT6 Induces R-Loop Formation, Replication Stress, and Cellular Senescence.
Takayuki Nojima, Michael Tellier, Jonathan Foxwell, Claudia Ribeiro de Almeida, Sue Mei Tan-Wong, Somdutta Dhir, Gwendal Dujardin, Ashish Dhir, Shona Murphy, Nick J Proudfoot. Mol Cell 2018
45
36

Tyrosine-1 of RNA Polymerase II CTD Controls Global Termination of Gene Transcription in Mammals.
Nilay Shah, Muhammad Ahmad Maqbool, Yousra Yahia, Amal Zine El Aabidine, Cyril Esnault, Ignasi Forné, Tim-Michael Decker, David Martin, Roland Schüller, Stefan Krebs,[...]. Mol Cell 2018
28
36

Human mutations in integrator complex subunits link transcriptome integrity to brain development.
Renske Oegema, David Baillat, Rachel Schot, Leontine M van Unen, Alice Brooks, Sima Kheradmand Kia, A Jeannette M Hoogeboom, Zheng Xia, Wei Li, Matteo Cesaroni,[...]. PLoS Genet 2017
35
36

The integrator complex recognizes a new double mark on the RNA polymerase II carboxyl-terminal domain.
Sylvain Egloff, Sylwia Anna Szczepaniak, Martin Dienstbier, Alice Taylor, Sophie Knight, Shona Murphy. J Biol Chem 2010
65
36

DSIF and NELF interact with Integrator to specify the correct post-transcriptional fate of snRNA genes.
Junichi Yamamoto, Yuri Hagiwara, Kunitoshi Chiba, Tomoyasu Isobe, Takashi Narita, Hiroshi Handa, Yuki Yamaguchi. Nat Commun 2014
38
36

Ser7 phosphorylation of the CTD recruits the RPAP2 Ser5 phosphatase to snRNA genes.
Sylvain Egloff, Justyna Zaborowska, Clélia Laitem, Tamás Kiss, Shona Murphy. Mol Cell 2012
78
36


Polyadenylation factor CPSF-73 is the pre-mRNA 3'-end-processing endonuclease.
Corey R Mandel, Syuzo Kaneko, Hailong Zhang, Damara Gebauer, Vasupradha Vethantham, James L Manley, Liang Tong. Nature 2006
263
36

Human snRNA genes use polyadenylation factors to promote efficient transcription termination.
Dawn O'Reilly, Olga V Kuznetsova, Clelia Laitem, Justyna Zaborowska, Martin Dienstbier, Shona Murphy. Nucleic Acids Res 2014
33
27

Transcriptional Control by Premature Termination: A Forgotten Mechanism.
Kinga Kamieniarz-Gdula, Nick J Proudfoot. Trends Genet 2019
20
27

Conserved factor Dhp1/Rat1/Xrn2 triggers premature transcription termination and nucleates heterochromatin to promote gene silencing.
Venkata R Chalamcharla, H Diego Folco, Jothy Dhakshnamoorthy, Shiv I S Grewal. Proc Natl Acad Sci U S A 2015
36
27

Microprocessor, Setx, Xrn2, and Rrp6 co-operate to induce premature termination of transcription by RNAPII.
Alexandre Wagschal, Emilie Rousset, Poornima Basavarajaiah, Xavier Contreras, Alex Harwig, Sabine Laurent-Chabalier, Mirai Nakamura, Xin Chen, Ke Zhang, Oussama Meziane,[...]. Cell 2012
120
27

mRNA decapping factors and the exonuclease Xrn2 function in widespread premature termination of RNA polymerase II transcription.
Kris Brannan, Hyunmin Kim, Benjamin Erickson, Kira Glover-Cutter, Soojin Kim, Nova Fong, Lauren Kiemele, Kirk Hansen, Richard Davis, Jens Lykke-Andersen,[...]. Mol Cell 2012
130
27

Phenotypic analysis of deflated/Ints7 function in Drosophila development.
Rachael J Rutkowski, William D Warren. Dev Dyn 2009
17
27

Nipbl Interacts with Zfp609 and the Integrator Complex to Regulate Cortical Neuron Migration.
Debbie L C van den Berg, Roberta Azzarelli, Koji Oishi, Ben Martynoga, Noelia Urbán, Dick H W Dekkers, Jeroen A Demmers, François Guillemot. Neuron 2017
21
27


The Integrator Complex Prevents Dedifferentiation of Intermediate Neural Progenitors back into Neural Stem Cells.
Yingjie Zhang, Chwee Tat Koe, Ye Sing Tan, Joses Ho, Patrick Tan, Fengwei Yu, Wing-Kin Sung, Hongyan Wang. Cell Rep 2019
8
37


A human telomerase holoenzyme protein required for Cajal body localization and telomere synthesis.
Andrew S Venteicher, Eladio B Abreu, Zhaojing Meng, Kelly E McCann, Rebecca M Terns, Timothy D Veenstra, Michael P Terns, Steven E Artandi. Science 2009
325
27


Inhibition of telomerase RNA decay rescues telomerase deficiency caused by dyskerin or PARN defects.
Siddharth Shukla, Jens C Schmidt, Katherine C Goldfarb, Thomas R Cech, Roy Parker. Nat Struct Mol Biol 2016
60
27


Loss of Human TGS1 Hypermethylase Promotes Increased Telomerase RNA and Telomere Elongation.
Lu Chen, Caitlin M Roake, Alessandra Galati, Francesca Bavasso, Emanuela Micheli, Isabella Saggio, Stefan Schoeftner, Stefano Cacchione, Maurizio Gatti, Steven E Artandi,[...]. Cell Rep 2020
5
60

An Activity Switch in Human Telomerase Based on RNA Conformation and Shaped by TCAB1.
Lu Chen, Caitlin M Roake, Adam Freund, Pedro J Batista, Siqi Tian, Yi A Yin, Chandresh R Gajera, Shengda Lin, Byron Lee, Matthew F Pech,[...]. Cell 2018
21
27

Cryo-EM structure of substrate-bound human telomerase holoenzyme.
Thi Hoang Duong Nguyen, Jane Tam, Robert A Wu, Basil J Greber, Daniel Toso, Eva Nogales, Kathleen Collins. Nature 2018
81
27

Human telomerase RNA accumulation in Cajal bodies facilitates telomerase recruitment to telomeres and telomere elongation.
Gaël Cristofari, Emem Adolf, Patrick Reichenbach, Katarzyna Sikora, Rebecca M Terns, Michael P Terns, Joachim Lingner. Mol Cell 2007
114
27

Live Cell Imaging Reveals the Dynamics of Telomerase Recruitment to Telomeres.
Jens C Schmidt, Arthur J Zaug, Thomas R Cech. Cell 2016
83
27

Human Telomerase RNA Processing and Quality Control.
Chi-Kang Tseng, Hui-Fang Wang, Allison M Burns, Morgan R Schroeder, Martina Gaspari, Peter Baumann. Cell Rep 2015
75
27

Minimized human telomerase maintains telomeres and resolves endogenous roles of H/ACA proteins, TCAB1, and Cajal bodies.
Jacob M Vogan, Xiaozhu Zhang, Daniel T Youmans, Samuel G Regalado, Joshua Z Johnson, Dirk Hockemeyer, Kathleen Collins. Elife 2016
28
27



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.