A citation-based method for searching scientific literature

Silvia Monticelli. Trends Biochem Sci 2019
Times Cited: 6







List of co-cited articles
12 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Epigenetic control of T-helper-cell differentiation.
Christopher B Wilson, Emily Rowell, Masayuki Sekimata. Nat Rev Immunol 2009
504
33

The Transcription Factor STAT6 Mediates Direct Repression of Inflammatory Enhancers and Limits Activation of Alternatively Polarized Macrophages.
Zsolt Czimmerer, Bence Daniel, Attila Horvath, Dominik Rückerl, Gergely Nagy, Mate Kiss, Matthew Peloquin, Marietta M Budai, Ixchelt Cuaranta-Monroy, Zoltan Simandi,[...]. Immunity 2018
106
33

Tet2 is required to resolve inflammation by recruiting Hdac2 to specifically repress IL-6.
Qian Zhang, Kai Zhao, Qicong Shen, Yanmei Han, Yan Gu, Xia Li, Dezhi Zhao, Yiqi Liu, Chunmei Wang, Xiang Zhang,[...]. Nature 2015
414
33

Role of TET enzymes in DNA methylation, development, and cancer.
Kasper Dindler Rasmussen, Kristian Helin. Genes Dev 2016
495
33

The DNA Methylcytosine Dioxygenase Tet2 Sustains Immunosuppressive Function of Tumor-Infiltrating Myeloid Cells to Promote Melanoma Progression.
Wen Pan, Shu Zhu, Kun Qu, Katrina Meeth, Jijun Cheng, Kaixin He, Hongdi Ma, Yan Liao, Xizhi Wen, Christine Roden,[...]. Immunity 2017
77
33

Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine.
Shinsuke Ito, Li Shen, Qing Dai, Susan C Wu, Leonard B Collins, James A Swenberg, Chuan He, Yi Zhang. Science 2011
33

Dynamic changes in the human methylome during differentiation.
Louise Laurent, Eleanor Wong, Guoliang Li, Tien Huynh, Aristotelis Tsirigos, Chin Thing Ong, Hwee Meng Low, Ken Wing Kin Sung, Isidore Rigoutsos, Jeanne Loring,[...]. Genome Res 2010
711
33


Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation.
Gabriella Ficz, Miguel R Branco, Stefanie Seisenberger, Fátima Santos, Felix Krueger, Timothy A Hore, C Joana Marques, Simon Andrews, Wolf Reik. Nature 2011
808
33

Global epigenomic reconfiguration during mammalian brain development.
Ryan Lister, Eran A Mukamel, Joseph R Nery, Mark Urich, Clare A Puddifoot, Nicholas D Johnson, Jacinta Lucero, Yun Huang, Andrew J Dwork, Matthew D Schultz,[...]. Science 2013
33

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1.
Mamta Tahiliani, Kian Peng Koh, Yinghua Shen, William A Pastor, Hozefa Bandukwala, Yevgeny Brudno, Suneet Agarwal, Lakshminarayan M Iyer, David R Liu, L Aravind,[...]. Science 2009
33

Identification of DNA methyltransferase 3a as a T cell receptor-induced regulator of Th1 and Th2 differentiation.
Christopher J Gamper, Agoston T Agoston, William G Nelson, Jonathan D Powell. J Immunol 2009
75
33

Identification of a novel, dendritic cell-associated molecule, dectin-1, by subtractive cDNA cloning.
K Ariizumi, G L Shen, S Shikano, S Xu, R Ritter, T Kumamoto, D Edelbaum, A Morita, P R Bergstresser, A Takashima. J Biol Chem 2000
335
16

De Novo Epigenetic Programs Inhibit PD-1 Blockade-Mediated T Cell Rejuvenation.
Hazem E Ghoneim, Yiping Fan, Ardiana Moustaki, Hossam A Abdelsamed, Pradyot Dash, Pranay Dogra, Robert Carter, Walid Awad, Geoff Neale, Paul G Thomas,[...]. Cell 2017
349
16

Short-term memory of danger signals and environmental stimuli in immune cells.
Silvia Monticelli, Gioacchino Natoli. Nat Immunol 2013
56
16

Trained immunity: A program of innate immune memory in health and disease.
Mihai G Netea, Leo A B Joosten, Eicke Latz, Kingston H G Mills, Gioacchino Natoli, Hendrik G Stunnenberg, Luke A J O'Neill, Ramnik J Xavier. Science 2016
16

B-1 cell responses to infections.
Fauna L Smith, Nicole Baumgarth. Curr Opin Immunol 2019
34
16


Sepsis-induced immunosuppression: from cellular dysfunctions to immunotherapy.
Richard S Hotchkiss, Guillaume Monneret, Didier Payen. Nat Rev Immunol 2013
16

Engrafted parenchymal brain macrophages differ from microglia in transcriptome, chromatin landscape and response to challenge.
Anat Shemer, Jonathan Grozovski, Tuan Leng Tay, Jenhan Tao, Alon Volaski, Patrick Süß, Alberto Ardura-Fabregat, Mor Gross-Vered, Jung-Seok Kim, Eyal David,[...]. Nat Commun 2018
90
16

Epigenetic stability of exhausted T cells limits durability of reinvigoration by PD-1 blockade.
Kristen E Pauken, Morgan A Sammons, Pamela M Odorizzi, Sasikanth Manne, Jernej Godec, Omar Khan, Adam M Drake, Zeyu Chen, Debattama R Sen, Makoto Kurachi,[...]. Science 2016
611
16

The transcription factor Gata6 links tissue macrophage phenotype and proliferative renewal.
Marcela Rosas, Luke C Davies, Peter J Giles, Chia-Te Liao, Bashar Kharfan, Timothy C Stone, Valerie B O'Donnell, Donald J Fraser, Simon A Jones, Philip R Taylor. Science 2014
249
16

CD8 T Cell Exhaustion During Chronic Viral Infection and Cancer.
Laura M McLane, Mohamed S Abdel-Hakeem, E John Wherry. Annu Rev Immunol 2019
542
16

Overview of (1-->3)-beta-D-glucan immunobiology.
D L Williams. Mediators Inflamm 1997
122
16

Latent enhancers activated by stimulation in differentiated cells.
Renato Ostuni, Viviana Piccolo, Iros Barozzi, Sara Polletti, Alberto Termanini, Silvia Bonifacio, Alessia Curina, Elena Prosperini, Serena Ghisletti, Gioacchino Natoli. Cell 2013
507
16

Modulation of Myelopoiesis Progenitors Is an Integral Component of Trained Immunity.
Ioannis Mitroulis, Klara Ruppova, Baomei Wang, Lan-Sun Chen, Michal Grzybek, Tatyana Grinenko, Anne Eugster, Maria Troullinaki, Alessandra Palladini, Ioannis Kourtzelis,[...]. Cell 2018
433
16

The inflammasomes.
Kate Schroder, Jurg Tschopp. Cell 2010
16

Identification of long-lived proteins reveals exceptional stability of essential cellular structures.
Brandon H Toyama, Jeffrey N Savas, Sung Kyu Park, Michael S Harris, Nicholas T Ingolia, John R Yates, Martin W Hetzer. Cell 2013
319
16

The influence of remaining live BCG organisms in vaccinated mice on the maintenance of immunity to tuberculosis.
A W Olsen, L Brandt, E M Agger, L A H van Pinxteren, P Andersen. Scand J Immunol 2004
58
16

Heterogeneity of neutrophils.
Lai Guan Ng, Renato Ostuni, Andrés Hidalgo. Nat Rev Immunol 2019
211
16


Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities.
Sven Heinz, Christopher Benner, Nathanael Spann, Eric Bertolino, Yin C Lin, Peter Laslo, Jason X Cheng, Cornelis Murre, Harinder Singh, Christopher K Glass. Mol Cell 2010
16

Developmental Origin Governs CD8+ T Cell Fate Decisions during Infection.
Norah L Smith, Ravi K Patel, Arnold Reynaldi, Jennifer K Grenier, Jocelyn Wang, Neva B Watson, Kito Nzingha, Kristel J Yee Mon, Seth A Peng, Andrew Grimson,[...]. Cell 2018
77
16

Hemogenic Endothelial Fate Mapping Reveals Dual Developmental Origin of Mast Cells.
Rebecca Gentek, Clément Ghigo, Guillaume Hoeffel, Maxime Jacques Bulle, Rasha Msallam, Gregory Gautier, Pierre Launay, Jinmiao Chen, Florent Ginhoux, Marc Bajénoff. Immunity 2018
144
16

Chromatin contributions to the regulation of innate immunity.
Stephen T Smale, Alexander Tarakhovsky, Gioacchino Natoli. Annu Rev Immunol 2014
110
16

Macrophages: development and tissue specialization.
Chen Varol, Alexander Mildner, Steffen Jung. Annu Rev Immunol 2015
478
16

A unifying model for the selective regulation of inducible transcription by CpG islands and nucleosome remodeling.
Vladimir R Ramirez-Carrozzi, Daniel Braas, Dev M Bhatt, Christine S Cheng, Christine Hong, Kevin R Doty, Joshua C Black, Alexander Hoffmann, Michael Carey, Stephen T Smale. Cell 2009
415
16

Synergistic activation of inflammatory cytokine genes by interferon-γ-induced chromatin remodeling and toll-like receptor signaling.
Yu Qiao, Eugenia G Giannopoulou, Chun Hin Chan, Sung-Ho Park, Shiaoching Gong, Janice Chen, Xiaoyu Hu, Olivier Elemento, Lionel B Ivashkiv. Immunity 2013
168
16

Environment drives selection and function of enhancers controlling tissue-specific macrophage identities.
David Gosselin, Verena M Link, Casey E Romanoski, Gregory J Fonseca, Dawn Z Eichenfield, Nathanael J Spann, Joshua D Stender, Hyun B Chun, Hannah Garner, Frederic Geissmann,[...]. Cell 2014
782
16

Dynamics of replication-independent histone turnover in budding yeast.
Michael F Dion, Tommy Kaplan, Minkyu Kim, Stephen Buratowski, Nir Friedman, Oliver J Rando. Science 2007
407
16

Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment.
Yonit Lavin, Deborah Winter, Ronnie Blecher-Gonen, Eyal David, Hadas Keren-Shaul, Miriam Merad, Steffen Jung, Ido Amit. Cell 2014
16

Identification and characterization of enhancers controlling the inflammatory gene expression program in macrophages.
Serena Ghisletti, Iros Barozzi, Flore Mietton, Sara Polletti, Francesca De Santa, Elisa Venturini, Lorna Gregory, Lorne Lonie, Adeline Chew, Chia-Lin Wei,[...]. Immunity 2010
462
16

Gata6 regulates aspartoacylase expression in resident peritoneal macrophages and controls their survival.
Emmanuel L Gautier, Stoyan Ivanov, Jesse W Williams, Stanley Ching-Cheng Huang, Genevieve Marcelin, Keke Fairfax, Peter L Wang, Jeremy S Francis, Paola Leone, David B Wilson,[...]. J Exp Med 2014
129
16

PPARγ is a nexus controlling alternative activation of macrophages via glutamine metabolism.
Victoria L Nelson, Hoang C B Nguyen, Juan C Garcìa-Cañaveras, Erika R Briggs, Wesley Y Ho, Joanna R DiSpirito, Jill M Marinis, David A Hill, Mitchell A Lazar. Genes Dev 2018
52
16

Rhythmic modulation of the hematopoietic niche through neutrophil clearance.
María Casanova-Acebes, Christophe Pitaval, Linnea A Weiss, César Nombela-Arrieta, Raphaël Chèvre, Noelia A-González, Yuya Kunisaki, Dachuan Zhang, Nico van Rooijen, Leslie E Silberstein,[...]. Cell 2013
381
16

Allergic inflammatory memory in human respiratory epithelial progenitor cells.
Jose Ordovas-Montanes, Daniel F Dwyer, Sarah K Nyquist, Kathleen M Buchheit, Marko Vukovic, Chaarushena Deb, Marc H Wadsworth, Travis K Hughes, Samuel W Kazer, Eri Yoshimoto,[...]. Nature 2018
184
16

Interferon-γ Represses M2 Gene Expression in Human Macrophages by Disassembling Enhancers Bound by the Transcription Factor MAF.
Kyuho Kang, Sung Ho Park, Janice Chen, Yu Qiao, Eugenia Giannopoulou, Karen Berg, Adedayo Hanidu, Jun Li, Gerald Nabozny, Keunsoo Kang,[...]. Immunity 2017
90
16

Gene-specific control of inflammation by TLR-induced chromatin modifications.
Simmie L Foster, Diana C Hargreaves, Ruslan Medzhitov. Nature 2007
854
16

Specification of tissue-resident macrophages during organogenesis.
Elvira Mass, Ivan Ballesteros, Matthias Farlik, Florian Halbritter, Patrick Günther, Lucile Crozet, Christian E Jacome-Galarza, Kristian Händler, Johanna Klughammer, Yasuhiro Kobayashi,[...]. Science 2016
424
16

Oxidative degradation of an antitumor (1-3)-beta-D-glucan, grifolan.
I Nono, N Ohno, A Masuda, S Oikawa, T Yadomae. J Pharmacobiodyn 1991
26
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.