A citation-based method for searching scientific literature

Tomáš Crhák, Dagmar Zachová, Miloslava Fojtová, Eva Sýkorová. Plant Sci 2019
Times Cited: 2







List of co-cited articles
21 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Characterisation of an unusual telomere motif (TTTTTTAGGG)n in the plant Cestrum elegans (Solanaceae), a species with a large genome.
Vratislav Peška, Petr Fajkus, Miloslava Fojtová, Martina Dvořáčková, Jan Hapala, Vojtěch Dvořáček, Pavla Polanská, Andrew R Leitch, Eva Sýkorová, Jiří Fajkus. Plant J 2015
31
100

Cryo-EM structure of substrate-bound human telomerase holoenzyme.
Thi Hoang Duong Nguyen, Jane Tam, Robert A Wu, Basil J Greber, Daniel Toso, Eva Nogales, Kathleen Collins. Nature 2018
87
100

Telomere variability in the monocotyledonous plant order Asparagales.
E Sýkorová, K Y Lim, Z Kunická, M W Chase, M D Bennett, J Fajkus, A R Leitch. Proc Biol Sci 2003
74
100


Centromere and telomere sequence alterations reflect the rapid genome evolution within the carnivorous plant genus Genlisea.
Trung D Tran, Hieu X Cao, Gabriele Jovtchev, Pavel Neumann, Petr Novák, Miloslava Fojtová, Giang T H Vu, Jiří Macas, Jiří Fajkus, Ingo Schubert,[...]. Plant J 2015
23
100

A broad phylogenetic survey unveils the diversity and evolution of telomeres in eukaryotes.
Jana Fulnecková, Tereza Sevcíková, Jirí Fajkus, Alena Lukesová, Martin Lukes, Cestmír Vlcek, B Franz Lang, Eunsoo Kim, Marek Eliás, Eva Sykorová. Genome Biol Evol 2013
47
100

Plant cells express telomerase activity upon transfer to callus culture, without extensively changing telomere lengths.
J Fajkus, J Fulnecková, M Hulánová, K Berková, K Ríha, R Matyásek. Mol Gen Genet 1998
61
100

Two RNA subunits and POT1a are components of Arabidopsis telomerase.
Catherine Cifuentes-Rojas, Kalpana Kannan, Lin Tseng, Dorothy E Shippen. Proc Natl Acad Sci U S A 2011
56
100

A novel hypoxic stress-responsive long non-coding RNA transcribed by RNA polymerase III in Arabidopsis.
Juan Wu, Toshihiro Okada, Toru Fukushima, Takahiko Tsudzuki, Masahiro Sugiura, Yasushi Yukawa. RNA Biol 2012
44
100

Role of alternative telomere lengthening unmasked in telomerase knock-out mutant plants.
Eva Růcková, Jirí Friml, Petra Procházková Schrumpfová, Jirí Fajkus. Plant Mol Biol 2008
34
100

Evolutionary perspectives of telomerase RNA structure and function.
Joshua D Podlevsky, Julian J-L Chen. RNA Biol 2016
45
100

Telomeres in Plants and Humans: Not So Different, Not So Similar.
Petra Procházková Schrumpfová, Miloslava Fojtová, Jiří Fajkus. Cells 2019
13
100


Biogenesis of telomerase ribonucleoproteins.
Emily D Egan, Kathleen Collins. RNA 2012
115
100


The plant Pontin and Reptin homologues, RuvBL1 and RuvBL2a, colocalize with TERT and TRB proteins in vivo, and participate in telomerase biogenesis.
Šárka Schořová, Jiří Fajkus, Lenka Záveská Drábková, David Honys, Petra Procházková Schrumpfová. Plant J 2019
6
100

Telomerase activity in plant cells.
J Fajkus, A Kovarík, R Královics. FEBS Lett 1996
45
100

Asparagales telomerases which synthesize the human type of telomeres.
Eva Sýkorová, Andrew Rowland Leitch, Jirí Fajkus. Plant Mol Biol 2006
32
100

Progress in Human and Tetrahymena Telomerase Structure Determination.
Henry Chan, Yaqiang Wang, Juli Feigon. Annu Rev Biophys 2017
26
100

Allium telomeres unmasked: the unusual telomeric sequence (CTCGGTTATGGG)n is synthesized by telomerase.
Petr Fajkus, Vratislav Peška, Zdeňka Sitová, Jana Fulnečková, Martina Dvořáčková, Roman Gogela, Eva Sýkorová, Jan Hapala, Jiří Fajkus. Plant J 2016
39
100

Three TERT genes in Nicotiana tabacum.
Eva Sýkorová, Jana Fulnečková, Petr Mokroš, Jiří Fajkus, Miloslava Fojtová, Vratislav Peška. Chromosome Res 2012
9
100

Bacterial proteins pinpoint a single eukaryotic root.
Romain Derelle, Guifré Torruella, Vladimír Klimeš, Henner Brinkmann, Eunsoo Kim, Čestmír Vlček, B Franz Lang, Marek Eliáš. Proc Natl Acad Sci U S A 2015
92
50


Phylotranscriptomic analysis of the origin and early diversification of land plants.
Norman J Wickett, Siavash Mirarab, Nam Nguyen, Tandy Warnow, Eric Carpenter, Naim Matasci, Saravanaraj Ayyampalayam, Michael S Barker, J Gordon Burleigh, Matthew A Gitzendanner,[...]. Proc Natl Acad Sci U S A 2014
578
50


An alternative root for the eukaryote tree of life.
Ding He, Omar Fiz-Palacios, Cheng-Jie Fu, Johanna Fehling, Chun-Chieh Tsai, Sandra L Baldauf. Curr Biol 2014
127
50

Evaluating methods for isolating total RNA and predicting the success of sequencing phylogenetically diverse plant transcriptomes.
Marc T J Johnson, Eric J Carpenter, Zhijian Tian, Richard Bruskiewich, Jason N Burris, Charlotte T Carrigan, Mark W Chase, Neil D Clarke, Sarah Covshoff, Claude W Depamphilis,[...]. PLoS One 2012
109
50

Molecular analysis of T-DNA insertion mutants identified putative regulatory elements in the AtTERT gene.
Miloslava Fojtová, Vratislav Peška, Zuzana Dobšáková, Iva Mozgová, Jiří Fajkus, Eva Sýkorová. J Exp Bot 2011
14
50

The absence of Arabidopsis-type telomeres in Cestrum and closely related genera Vestia and Sessea (Solanaceae): first evidence from eudicots.
Eva Sykorova, Kar Yoong Lim, Mark W Chase, Sandra Knapp, Ilia Judith Leitch, Andrew Rowland Leitch, Jiri Fajkus. Plant J 2003
63
50

Full-length transcriptome assembly from RNA-Seq data without a reference genome.
Manfred G Grabherr, Brian J Haas, Moran Yassour, Joshua Z Levin, Dawn A Thompson, Ido Amit, Xian Adiconis, Lin Fan, Raktima Raychowdhury, Qiandong Zeng,[...]. Nat Biotechnol 2011
50

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.
Kazutaka Katoh, Kazuharu Misawa, Kei-ichi Kuma, Takashi Miyata. Nucleic Acids Res 2002
50


Identification and comparative analysis of telomerase RNAs from Candida species reveal conservation of functional elements.
Stanislava Gunisova, Elhanan Elboher, Jozef Nosek, Valentin Gorkovoy, Yogev Brown, Jean-Francois Lucier, Nancy Laterreur, Raymund J Wellinger, Yehuda Tzfati, Lubomir Tomaska. RNA 2009
75
50

The signature of the Cestrum genome suggests an evolutionary response to the loss of (TTTAGGG)n telomeres.
Eva Sýkorová, K Yoong Lim, Jiri Fajkus, Andrew R Leitch. Chromosoma 2003
23
50

Aloe spp.--plants with vertebrate-like telomeric sequences.
Hanna Weiss, Harry Scherthan. Chromosome Res 2002
36
50

Conservation of the human telomere sequence (TTAGGG)n among vertebrates.
J Meyne, R L Ratliff, R K Moyzis. Proc Natl Acad Sci U S A 1989
577
50

Basic local alignment search tool.
S F Altschul, W Gish, W Miller, E W Myers, D J Lipman. J Mol Biol 1990
50

Loss and recovery of Arabidopsis-type telomere repeat sequences 5'-(TTTAGGG)(n)-3' in the evolution of a major radiation of flowering plants.
S P Adams, T P Hartman, K Y Lim, M W Chase, M D Bennett, I J Leitch, A R Leitch. Proc Biol Sci 2001
55
50


T-DNA integration into the Arabidopsis genome depends on sequences of pre-insertion sites.
Véronique Brunaud, Sandrine Balzergue, Bertrand Dubreucq, Sébastien Aubourg, Franck Samson, Stéphanie Chauvin, Nicole Bechtold, Corinne Cruaud, Richard DeRose, Georges Pelletier,[...]. EMBO Rep 2002
106
50

Structural RNAs of known and unknown function identified in malaria parasites by comparative genomics and RNA analysis.
Kausik Chakrabarti, Michael Pearson, Leslie Grate, Timothy Sterne-Weiler, Jonathan Deans, John Paul Donohue, Manuel Ares. RNA 2007
63
50

SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads.
Yinlong Xie, Gengxiong Wu, Jingbo Tang, Ruibang Luo, Jordan Patterson, Shanlin Liu, Weihua Huang, Guangzhu He, Shengchang Gu, Shengkang Li,[...]. Bioinformatics 2014
429
50

Identification of plant RAD52 homologs and characterization of the Arabidopsis thaliana RAD52-like genes.
Aviva Samach, Cathy Melamed-Bessudo, Naomi Avivi-Ragolski, Shmuel Pietrokovski, Avraham A Levy. Plant Cell 2011
46
50

Data access for the 1,000 Plants (1KP) project.
Naim Matasci, Ling-Hong Hung, Zhixiang Yan, Eric J Carpenter, Norman J Wickett, Siavash Mirarab, Nam Nguyen, Tandy Warnow, Saravanaraj Ayyampalayam, Michael Barker,[...]. Gigascience 2014
316
50


Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.
S F Altschul, T L Madden, A A Schäffer, J Zhang, Z Zhang, W Miller, D J Lipman. Nucleic Acids Res 1997
50

Evolution of the Arabidopsis telomerase RNA.
Mark A Beilstein, Amy E Brinegar, Dorothy E Shippen. Front Genet 2012
15
50

Plant interstitial telomere motifs participate in the control of gene expression in root meristems.
D Tremousaygue, A Manevski, C Bardet, N Lescure, B Lescure. Plant J 1999
65
50


Living with genome instability: plant responses to telomere dysfunction.
K Riha, T D McKnight, L R Griffing, D E Shippen. Science 2001
153
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.