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List of co-cited articles
132 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
33

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?
Shankar Balasubramanian, Laurence H Hurley, Stephen Neidle. Nat Rev Drug Discov 2011
963
33

Refinement of the AMBER force field for nucleic acids: improving the description of alpha/gamma conformers.
Alberto Pérez, Iván Marchán, Daniel Svozil, Jiri Sponer, Thomas E Cheatham, Charles A Laughton, Modesto Orozco. Biophys J 2007
33

The G-quadruplex-interactive molecule BRACO-19 inhibits tumor growth, consistent with telomere targeting and interference with telomerase function.
Angelika M Burger, Fangping Dai, Christoph M Schultes, Anthony P Reszka, Michael J Moore, John A Double, Stephen Neidle. Cancer Res 2005
362
33

G-quadruplexes and G-quadruplex ligands: targets and tools in antiviral therapy.
Emanuela Ruggiero, Sara N Richter. Nucleic Acids Res 2018
128
33



G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
640
27

Quadruplex DNA: sequence, topology and structure.
Sarah Burge, Gary N Parkinson, Pascale Hazel, Alan K Todd, Stephen Neidle. Nucleic Acids Res 2006
27


Binding of Telomestatin, TMPyP4, BSU6037, and BRACO19 to a Telomeric G-Quadruplex-Duplex Hybrid Probed by All-Atom Molecular Dynamics Simulations with Explicit Solvent.
Holli-Joi Sullivan, Carolyn Readmond, Christina Radicella, Victoria Persad, Thomas J Fasano, Chun Wu. ACS Omega 2018
11
45

Crystal structure of parallel quadruplexes from human telomeric DNA.
Gary N Parkinson, Michael P H Lee, Stephen Neidle. Nature 2002
22

Specific association of human telomerase activity with immortal cells and cancer.
N W Kim, M A Piatyszek, K R Prowse, C B Harley, M D West, P L Ho, G M Coviello, W E Wright, S L Weinrich, J W Shay. Science 1994
22

Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
22

Calculating structures and free energies of complex molecules: combining molecular mechanics and continuum models.
P A Kollman, I Massova, C Reyes, B Kuhn, S Huo, L Chong, M Lee, T Lee, Y Duan, W Wang,[...]. Acc Chem Res 2000
22

DNA secondary structures: stability and function of G-quadruplex structures.
Matthew L Bochman, Katrin Paeschke, Virginia A Zakian. Nat Rev Genet 2012
693
22

Resolving the Ligand-Binding Specificity in c-MYC G-Quadruplex DNA: Absolute Binding Free Energy Calculations and SPR Experiment.
Nanjie Deng, Lauren Wickstrom, Piotr Cieplak, Clement Lin, Danzhou Yang. J Phys Chem B 2017
22
22

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
22

Reference simulations of noncanonical nucleic acids with different χ variants of the AMBER force field: quadruplex DNA, quadruplex RNA and Z-DNA.
Miroslav Krepl, Marie Zgarbová, Petr Stadlbauer, Michal Otyepka, Pavel Banáš, Jaroslav Koča, Thomas E Cheatham, Petr Jurečka, Jiří Sponer. J Chem Theory Comput 2012
155
22

Refinement of the Sugar-Phosphate Backbone Torsion Beta for AMBER Force Fields Improves the Description of Z- and B-DNA.
Marie Zgarbová, Jiří Šponer, Michal Otyepka, Thomas E Cheatham, Rodrigo Galindo-Murillo, Petr Jurečka. J Chem Theory Comput 2015
166
22


Existence of G-quadruplex structures in promoter region of oncogenes confirmed by G-quadruplex DNA cross-linking strategy.
Libo Yuan, Tian Tian, Yuqi Chen, Shengyong Yan, Xiwen Xing, Zhengan Zhang, Qianqian Zhai, Liang Xu, Shaoru Wang, Xiaocheng Weng,[...]. Sci Rep 2013
64
22


Hallmarks of cancer: the next generation.
Douglas Hanahan, Robert A Weinberg. Cell 2011
16


Chemical and structural studies provide a mechanistic basis for recognition of the MYC G-quadruplex.
David R Calabrese, Xiang Chen, Elena C Leon, Snehal M Gaikwad, Zaw Phyo, William M Hewitt, Stephanie Alden, Thomas A Hilimire, Fahu He, Aleksandra M Michalowski,[...]. Nat Commun 2018
49
16


Inhibition of telomerase by G-quartet DNA structures.
A M Zahler, J R Williamson, T R Cech, D M Prescott. Nature 1991
867
16

Solution structure of an intramolecular (3 + 1) human telomeric G-quadruplex bound to a telomestatin derivative.
Wan Jun Chung, Brahim Heddi, Masayuki Tera, Keisuke Iida, Kazuo Nagasawa, Anh Tuân Phan. J Am Chem Soc 2013
96
16

Telomestatin, a potent telomerase inhibitor that interacts quite specifically with the human telomeric intramolecular g-quadruplex.
Mu-Yong Kim, Hariprasad Vankayalapati, Kazuo Shin-Ya, Konstanty Wierzba, Laurence H Hurley. J Am Chem Soc 2002
364
16


Development and testing of a general amber force field.
Junmei Wang, Romain M Wolf, James W Caldwell, Peter A Kollman, David A Case. J Comput Chem 2004
16

Stability and kinetics of G-quadruplex structures.
Andrew N Lane, J Brad Chaires, Robert D Gray, John O Trent. Nucleic Acids Res 2008
435
16

Structural dynamics of possible late-stage intermediates in folding of quadruplex DNA studied by molecular simulations.
Petr Stadlbauer, Miroslav Krepl, Thomas E Cheatham, Jaroslav Koca, Jirí Sponer. Nucleic Acids Res 2013
73
16

Structural basis of DNA quadruplex recognition by an acridine drug.
Nancy H Campbell, Gary N Parkinson, Anthony P Reszka, Stephen Neidle. J Am Chem Soc 2008
210
16

A novel small molecule that alters shelterin integrity and triggers a DNA-damage response at telomeres.
Raphaël Rodriguez, Sebastian Müller, Justin A Yeoman, Chantal Trentesaux, Jean-François Riou, Shankar Balasubramanian. J Am Chem Soc 2008
225
16


Elevated levels of G-quadruplex formation in human stomach and liver cancer tissues.
Giulia Biffi, David Tannahill, Jodi Miller, William J Howat, Shankar Balasubramanian. PLoS One 2014
85
16





Toward Improved Description of DNA Backbone: Revisiting Epsilon and Zeta Torsion Force Field Parameters.
Marie Zgarbová, F Javier Luque, Jiří Sponer, Thomas E Cheatham, Michal Otyepka, Petr Jurečka. J Chem Theory Comput 2013
165
16

Assessing the performance of MM/PBSA and MM/GBSA methods. 3. The impact of force fields and ligand charge models.
Lei Xu, Huiyong Sun, Youyong Li, Junmei Wang, Tingjun Hou. J Phys Chem B 2013
273
16

VMD: visual molecular dynamics.
W Humphrey, A Dalke, K Schulten. J Mol Graph 1996
16


A G-quadruplex telomere targeting agent produces p16-associated senescence and chromosomal fusions in human prostate cancer cells.
Christopher M Incles, Christoph M Schultes, Helena Kempski, Heike Koehler, Lloyd R Kelland, Stephen Neidle. Mol Cancer Ther 2004
109
11


Human telomeric sequence forms a hybrid-type intramolecular G-quadruplex structure with mixed parallel/antiparallel strands in potassium solution.
Attila Ambrus, Ding Chen, Jixun Dai, Tiffanie Bialis, Roger A Jones, Danzhou Yang. Nucleic Acids Res 2006
737
11

Different loop arrangements of intramolecular human telomeric (3+1) G-quadruplexes in K+ solution.
Anh Tuân Phan, Kim Ngoc Luu, Dinshaw J Patel. Nucleic Acids Res 2006
232
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.