A citation-based method for searching scientific literature

Svetoslav Chakarov, Hwee Ying Lim, Leonard Tan, Sheau Yng Lim, Peter See, Josephine Lum, Xiao-Meng Zhang, Shihui Foo, Satoshi Nakamizo, Kaibo Duan, Wan Ting Kong, Rebecca Gentek, Akhila Balachander, Daniel Carbajo, Camille Bleriot, Benoit Malleret, John Kit Chung Tam, Sonia Baig, Muhammad Shabeer, Sue-Anne Ee Shiow Toh, Andreas Schlitzer, Anis Larbi, Thomas Marichal, Bernard Malissen, Jinmiao Chen, Michael Poidinger, Kenji Kabashima, Marc Bajenoff, Lai Guan Ng, Veronique Angeli, Florent Ginhoux. Science 2019
Times Cited: 351







List of co-cited articles
976 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Tissue-resident macrophages originate from yolk-sac-derived erythro-myeloid progenitors.
Elisa Gomez Perdiguero, Kay Klapproth, Christian Schulz, Katrin Busch, Emanuele Azzoni, Lucile Crozet, Hannah Garner, Celine Trouillet, Marella F de Bruijn, Frederic Geissmann,[...]. Nature 2015
26

Fate mapping reveals origins and dynamics of monocytes and tissue macrophages under homeostasis.
Simon Yona, Ki-Wook Kim, Yochai Wolf, Alexander Mildner, Diana Varol, Michal Breker, Dalit Strauss-Ayali, Sergey Viukov, Martin Guilliams, Alexander Misharin,[...]. Immunity 2013
25

Tissue-Resident Macrophage Ontogeny and Homeostasis.
Florent Ginhoux, Martin Guilliams. Immunity 2016
873
23

Embryonic and adult-derived resident cardiac macrophages are maintained through distinct mechanisms at steady state and during inflammation.
Slava Epelman, Kory J Lavine, Anna E Beaudin, Dorothy K Sojka, Javier A Carrero, Boris Calderon, Thaddeus Brija, Emmanuel L Gautier, Stoyan Ivanov, Ansuman T Satpathy,[...]. Immunity 2014
844
20

Three Unique Interstitial Macrophages in the Murine Lung at Steady State.
Sophie L Gibbings, Stacey M Thomas, Shaikh M Atif, Alexandra L McCubbrey, A Nicole Desch, Thomas Danhorn, Sonia M Leach, Donna L Bratton, Peter M Henson, William J Janssen,[...]. Am J Respir Cell Mol Biol 2017
203
20

Alveolar macrophages develop from fetal monocytes that differentiate into long-lived cells in the first week of life via GM-CSF.
Martin Guilliams, Ismé De Kleer, Sandrine Henri, Sijranke Post, Leen Vanhoutte, Sofie De Prijck, Kim Deswarte, Bernard Malissen, Hamida Hammad, Bart N Lambrecht. J Exp Med 2013
716
20

Gene-expression profiles and transcriptional regulatory pathways that underlie the identity and diversity of mouse tissue macrophages.
Emmanuel L Gautier, Tal Shay, Jennifer Miller, Melanie Greter, Claudia Jakubzick, Stoyan Ivanov, Julie Helft, Andrew Chow, Kutlu G Elpek, Simon Gordonov,[...]. Nat Immunol 2012
18

Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment.
Yonit Lavin, Deborah Winter, Ronnie Blecher-Gonen, Eyal David, Hadas Keren-Shaul, Miriam Merad, Steffen Jung, Ido Amit. Cell 2014
18

Non-classical tissue monocytes and two functionally distinct populations of interstitial macrophages populate the mouse lung.
Joey Schyns, Qiang Bai, Cecilia Ruscitti, Coraline Radermecker, Sebastiaan De Schepper, Svetoslav Chakarov, Frédéric Farnir, Dimitri Pirottin, Florent Ginhoux, Guy Boeckxstaens,[...]. Nat Commun 2019
88
20

C-Myb(+) erythro-myeloid progenitor-derived fetal monocytes give rise to adult tissue-resident macrophages.
Guillaume Hoeffel, Jinmiao Chen, Yonit Lavin, Donovan Low, Francisca F Almeida, Peter See, Anna E Beaudin, Josephine Lum, Ivy Low, E Camilla Forsberg,[...]. Immunity 2015
640
17

Tissue-resident macrophages self-maintain locally throughout adult life with minimal contribution from circulating monocytes.
Daigo Hashimoto, Andrew Chow, Clara Noizat, Pearline Teo, Mary Beth Beasley, Marylene Leboeuf, Christian D Becker, Peter See, Jeremy Price, Daniel Lucas,[...]. Immunity 2013
16

Fate Mapping via Ms4a3-Expression History Traces Monocyte-Derived Cells.
Zhaoyuan Liu, Yaqi Gu, Svetoslav Chakarov, Camille Bleriot, Immanuel Kwok, Xin Chen, Amanda Shin, Weijie Huang, Regine J Dress, Charles-Antoine Dutertre,[...]. Cell 2019
203
16

Hyaluronan Receptor LYVE-1-Expressing Macrophages Maintain Arterial Tone through Hyaluronan-Mediated Regulation of Smooth Muscle Cell Collagen.
Hwee Ying Lim, Sheau Yng Lim, Chek Kun Tan, Chung Hwee Thiam, Chi Ching Goh, Daniel Carbajo, Samantha Hui Shang Chew, Peter See, Svetoslav Chakarov, Xiao Nong Wang,[...]. Immunity 2018
117
15

Monocyte-derived alveolar macrophages drive lung fibrosis and persist in the lung over the life span.
Alexander V Misharin, Luisa Morales-Nebreda, Paul A Reyfman, Carla M Cuda, James M Walter, Alexandra C McQuattie-Pimentel, Ching-I Chen, Kishore R Anekalla, Nikita Joshi, Kinola J N Williams,[...]. J Exp Med 2017
468
14

Origin and functions of tissue macrophages.
Slava Epelman, Kory J Lavine, Gwendalyn J Randolph. Immunity 2014
830
14

Fate mapping analysis reveals that adult microglia derive from primitive macrophages.
Florent Ginhoux, Melanie Greter, Marylene Leboeuf, Sayan Nandi, Peter See, Solen Gokhan, Mark F Mehler, Simon J Conway, Lai Guan Ng, E Richard Stanley,[...]. Science 2010
14

Establishment and Maintenance of the Macrophage Niche.
Martin Guilliams, Guilhem R Thierry, Johnny Bonnardel, Marc Bajenoff. Immunity 2020
158
14

Lipid-Associated Macrophages Control Metabolic Homeostasis in a Trem2-Dependent Manner.
Diego Adhemar Jaitin, Lorenz Adlung, Christoph A Thaiss, Assaf Weiner, Baoguo Li, Hélène Descamps, Patrick Lundgren, Camille Bleriot, Zhaoyuan Liu, Aleksandra Deczkowska,[...]. Cell 2019
354
13

Determinants of Resident Tissue Macrophage Identity and Function.
Camille Blériot, Svetoslav Chakarov, Florent Ginhoux. Immunity 2020
122
13

Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage.
Dvir Aran, Agnieszka P Looney, Leqian Liu, Esther Wu, Valerie Fong, Austin Hsu, Suzanna Chak, Ram P Naikawadi, Paul J Wolters, Adam R Abate,[...]. Nat Immunol 2019
881
13

Identification of a nerve-associated, lung-resident interstitial macrophage subset with distinct localization and immunoregulatory properties.
Basak B Ural, Stephen T Yeung, Payal Damani-Yokota, Joseph C Devlin, Maren de Vries, Paola Vera-Licona, Tasleem Samji, Catherine M Sawai, Geunhyo Jang, Oriana A Perez,[...]. Sci Immunol 2020
88
13

A lineage of myeloid cells independent of Myb and hematopoietic stem cells.
Christian Schulz, Elisa Gomez Perdiguero, Laurent Chorro, Heather Szabo-Rogers, Nicolas Cagnard, Katrin Kierdorf, Marco Prinz, Bishan Wu, Sten Eirik W Jacobsen, Jeffrey W Pollard,[...]. Science 2012
12

Comprehensive Integration of Single-Cell Data.
Tim Stuart, Andrew Butler, Paul Hoffman, Christoph Hafemeister, Efthymia Papalexi, William M Mauck, Yuhan Hao, Marlon Stoeckius, Peter Smibert, Rahul Satija. Cell 2019
12

Self-renewing resident cardiac macrophages limit adverse remodeling following myocardial infarction.
Sarah A Dick, Jillian A Macklin, Sara Nejat, Abdul Momen, Xavier Clemente-Casares, Marwan G Althagafi, Jinmiao Chen, Crystal Kantores, Siyavash Hosseinzadeh, Laura Aronoff,[...]. Nat Immunol 2019
299
11

Stellate Cells, Hepatocytes, and Endothelial Cells Imprint the Kupffer Cell Identity on Monocytes Colonizing the Liver Macrophage Niche.
Johnny Bonnardel, Wouter T'Jonck, Djoere Gaublomme, Robin Browaeys, Charlotte L Scott, Liesbet Martens, Bavo Vanneste, Sofie De Prijck, Sergei A Nedospasov, Anna Kremer,[...]. Immunity 2019
209
11

Influenza-induced monocyte-derived alveolar macrophages confer prolonged antibacterial protection.
Helena Aegerter, Justina Kulikauskaite, Stefania Crotta, Harshil Patel, Gavin Kelly, Edith M Hessel, Matthias Mack, Soren Beinke, Andreas Wack. Nat Immunol 2020
92
11

Macrophages Facilitate Electrical Conduction in the Heart.
Maarten Hulsmans, Sebastian Clauss, Ling Xiao, Aaron D Aguirre, Kevin R King, Alan Hanley, William J Hucker, Eike M Wülfers, Gunnar Seemann, Gabriel Courties,[...]. Cell 2017
475
10

Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19.
Mingfeng Liao, Yang Liu, Jing Yuan, Yanling Wen, Gang Xu, Juanjuan Zhao, Lin Cheng, Jinxiu Li, Xin Wang, Fuxiang Wang,[...]. Nat Med 2020
10

Does tissue imprinting restrict macrophage plasticity?
Martin Guilliams, Freya R Svedberg. Nat Immunol 2021
57
17

Single-Cell Transcriptomic Analysis of Human Lung Provides Insights into the Pathobiology of Pulmonary Fibrosis.
Paul A Reyfman, James M Walter, Nikita Joshi, Kishore R Anekalla, Alexandra C McQuattie-Pimentel, Stephen Chiu, Ramiro Fernandez, Mahzad Akbarpour, Ching-I Chen, Ziyou Ren,[...]. Am J Respir Crit Care Med 2019
496
10

Distinct macrophage lineages contribute to disparate patterns of cardiac recovery and remodeling in the neonatal and adult heart.
Kory J Lavine, Slava Epelman, Keita Uchida, Kassandra J Weber, Colin G Nichols, Joel D Schilling, David M Ornitz, Gwendalyn J Randolph, Douglas L Mann. Proc Natl Acad Sci U S A 2014
420
10

Tissue Resident CCR2- and CCR2+ Cardiac Macrophages Differentially Orchestrate Monocyte Recruitment and Fate Specification Following Myocardial Injury.
Geetika Bajpai, Andrea Bredemeyer, Wenjun Li, Konstantin Zaitsev, Andrew L Koenig, Inessa Lokshina, Jayaram Mohan, Brooke Ivey, His-Min Hsiao, Carla Weinheimer,[...]. Circ Res 2019
236
10

Macrophages in Tissue Repair, Regeneration, and Fibrosis.
Thomas A Wynn, Kevin M Vannella. Immunity 2016
10

Single cell RNA sequencing identifies unique inflammatory airspace macrophage subsets.
Kara J Mould, Nathan D Jackson, Peter M Henson, Max Seibold, William J Janssen. JCI Insight 2019
91
9

Flow cytometric analysis of macrophages and dendritic cell subsets in the mouse lung.
Alexander V Misharin, Luisa Morales-Nebreda, Gökhan M Mutlu, G R Scott Budinger, Harris Perlman. Am J Respir Cell Mol Biol 2013
503
9

Macrophage activation and polarization: nomenclature and experimental guidelines.
Peter J Murray, Judith E Allen, Subhra K Biswas, Edward A Fisher, Derek W Gilroy, Sergij Goerdt, Siamon Gordon, John A Hamilton, Lionel B Ivashkiv, Toby Lawrence,[...]. Immunity 2014
9

Lung interstitial macrophages alter dendritic cell functions to prevent airway allergy in mice.
Denis Bedoret, Hugues Wallemacq, Thomas Marichal, Christophe Desmet, Florence Quesada Calvo, Emmanuelle Henry, Rodrigue Closset, Benjamin Dewals, Caroline Thielen, Pascal Gustin,[...]. J Clin Invest 2009
264
9

Specification of tissue-resident macrophages during organogenesis.
Elvira Mass, Ivan Ballesteros, Matthias Farlik, Florian Halbritter, Patrick Günther, Lucile Crozet, Christian E Jacome-Galarza, Kristian Händler, Johanna Klughammer, Yasuhiro Kobayashi,[...]. Science 2016
441
9

Exposure to Bacterial CpG DNA Protects from Airway Allergic Inflammation by Expanding Regulatory Lung Interstitial Macrophages.
Catherine Sabatel, Coraline Radermecker, Laurence Fievez, Genevieve Paulissen, Svetoslav Chakarov, Claudia Fernandes, Sabine Olivier, Marie Toussaint, Dimitri Pirottin, Xue Xiao,[...]. Immunity 2017
112
9

Minimal differentiation of classical monocytes as they survey steady-state tissues and transport antigen to lymph nodes.
Claudia Jakubzick, Emmanuel L Gautier, Sophie L Gibbings, Dorothy K Sojka, Andreas Schlitzer, Theodore E Johnson, Stoyan Ivanov, Qiaonan Duan, Shashi Bala, Tracy Condon,[...]. Immunity 2013
497
9

Integrating single-cell transcriptomic data across different conditions, technologies, and species.
Andrew Butler, Paul Hoffman, Peter Smibert, Efthymia Papalexi, Rahul Satija. Nat Biotechnol 2018
9

Single-Cell Transcriptomics of Human and Mouse Lung Cancers Reveals Conserved Myeloid Populations across Individuals and Species.
Rapolas Zilionis, Camilla Engblom, Christina Pfirschke, Virginia Savova, David Zemmour, Hatice D Saatcioglu, Indira Krishnan, Giorgia Maroni, Claire V Meyerovitz, Clara M Kerwin,[...]. Immunity 2019
485
9

Alveolar macrophages: plasticity in a tissue-specific context.
Tracy Hussell, Thomas J Bell. Nat Rev Immunol 2014
729
9

Three tissue resident macrophage subsets coexist across organs with conserved origins and life cycles.
Sarah A Dick, Anthony Wong, Homaira Hamidzada, Sara Nejat, Robert Nechanitzky, Shabana Vohra, Brigitte Mueller, Rysa Zaman, Crystal Kantores, Laura Aronoff,[...]. Sci Immunol 2022
29
31

CellPhoneDB: inferring cell-cell communication from combined expression of multi-subunit ligand-receptor complexes.
Mirjana Efremova, Miquel Vento-Tormo, Sarah A Teichmann, Roser Vento-Tormo. Nat Protoc 2020
711
8

Tissue-resident macrophages.
Luke C Davies, Stephen J Jenkins, Judith E Allen, Philip R Taylor. Nat Immunol 2013
8

Bone marrow-derived monocytes give rise to self-renewing and fully differentiated Kupffer cells.
Charlotte L Scott, Fang Zheng, Patrick De Baetselier, Liesbet Martens, Yvan Saeys, Sofie De Prijck, Saskia Lippens, Chloé Abels, Steve Schoonooghe, Geert Raes,[...]. Nat Commun 2016
432
8

Human and Mouse Transcriptome Profiling Identifies Cross-Species Homology in Pulmonary and Lymph Node Mononuclear Phagocytes.
Sonia M Leach, Sophie L Gibbings, Anita D Tewari, Shaikh M Atif, Brian Vestal, Thomas Danhorn, William J Janssen, Tor D Wager, Claudia V Jakubzick. Cell Rep 2020
24
33

Does niche competition determine the origin of tissue-resident macrophages?
Martin Guilliams, Charlotte L Scott. Nat Rev Immunol 2017
232
8

Induction of the nuclear receptor PPAR-γ by the cytokine GM-CSF is critical for the differentiation of fetal monocytes into alveolar macrophages.
Christoph Schneider, Samuel P Nobs, Michael Kurrer, Hubert Rehrauer, Christoph Thiele, Manfred Kopf. Nat Immunol 2014
313
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.