A citation-based method for searching scientific literature

Yang Zeng, Taiping Chen. Genes (Basel) 2019
Times Cited: 79







List of co-cited articles
701 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The diverse roles of DNA methylation in mammalian development and disease.
Maxim V C Greenberg, Deborah Bourc'his. Nat Rev Mol Cell Biol 2019
420
13

DNA methylation dynamics during epigenetic reprogramming in the germline and preimplantation embryos.
Daniel M Messerschmidt, Barbara B Knowles, Davor Solter. Genes Dev 2014
362
12

Human DNA methylomes at base resolution show widespread epigenomic differences.
Ryan Lister, Mattia Pelizzola, Robert H Dowen, R David Hawkins, Gary Hon, Julian Tonti-Filippini, Joseph R Nery, Leonard Lee, Zhen Ye, Que-Minh Ngo,[...]. Nature 2009
11

DNA methylation: roles in mammalian development.
Zachary D Smith, Alexander Meissner. Nat Rev Genet 2013
11


Dnmt3L and the establishment of maternal genomic imprints.
D Bourc'his, G L Xu, C S Lin, B Bollman, T H Bestor. Science 2001
911
10

DNA methylation in mammals.
En Li, Yi Zhang. Cold Spring Harb Perspect Biol 2014
386
8

DNA methylation and its basic function.
Lisa D Moore, Thuc Le, Guoping Fan. Neuropsychopharmacology 2013
8


Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine.
Shinsuke Ito, Li Shen, Qing Dai, Susan C Wu, Leonard B Collins, James A Swenberg, Chuan He, Yi Zhang. Science 2011
7



CpG islands and the regulation of transcription.
Aimée M Deaton, Adrian Bird. Genes Dev 2011
7

Epigenetic reprogramming in mammalian development.
W Reik, W Dean, J Walter. Science 2001
7

Non-coding RNAs as regulators in epigenetics (Review).
Jian-Wei Wei, Kai Huang, Chao Yang, Chun-Sheng Kang. Oncol Rep 2017
205
6

Allosteric control of mammalian DNA methyltransferases - a new regulatory paradigm.
Albert Jeltsch, Renata Z Jurkowska. Nucleic Acids Res 2016
92
6

The role of Tet3 DNA dioxygenase in epigenetic reprogramming by oocytes.
Tian-Peng Gu, Fan Guo, Hui Yang, Hai-Ping Wu, Gui-Fang Xu, Wei Liu, Zhi-Guo Xie, Linyu Shi, Xinyi He, Seung-gi Jin,[...]. Nature 2011
710
6

Genomic imprinting in mammals.
Denise P Barlow, Marisa S Bartolomei. Cold Spring Harb Perspect Biol 2014
340
6

Genetic alterations of DNA methylation machinery in human diseases.
Tewfik Hamidi, Anup Kumar Singh, Taiping Chen. Epigenomics 2015
135
6

Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA.
Yu-Fei He, Bin-Zhong Li, Zheng Li, Peng Liu, Yang Wang, Qingyu Tang, Jianping Ding, Yingying Jia, Zhangcheng Chen, Lin Li,[...]. Science 2011
6

Essential role for de novo DNA methyltransferase Dnmt3a in paternal and maternal imprinting.
Masahiro Kaneda, Masaki Okano, Kenichiro Hata, Takashi Sado, Naomi Tsujimoto, En Li, Hiroyuki Sasaki. Nature 2004
880
6

Single-cell DNA methylome sequencing of human preimplantation embryos.
Ping Zhu, Hongshan Guo, Yixin Ren, Yu Hou, Ji Dong, Rong Li, Ying Lian, Xiaoying Fan, Boqiang Hu, Yun Gao,[...]. Nat Genet 2018
119
6

The DNA methylation landscape of human early embryos.
Hongshan Guo, Ping Zhu, Liying Yan, Rong Li, Boqiang Hu, Ying Lian, Jie Yan, Xiulian Ren, Shengli Lin, Junsheng Li,[...]. Nature 2014
490
6

UHRF1 plays a role in maintaining DNA methylation in mammalian cells.
Magnolia Bostick, Jong Kyong Kim, Pierre-Olivier Estève, Amander Clark, Sriharsa Pradhan, Steven E Jacobsen. Science 2007
834
6

The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ Cells.
Fan Guo, Liying Yan, Hongshan Guo, Lin Li, Boqiang Hu, Yangyu Zhao, Jun Yong, Yuqiong Hu, Xiaoye Wang, Yuan Wei,[...]. Cell 2015
273
6


DNA methylation and DNA methyltransferases.
John R Edwards, Olya Yarychkivska, Mathieu Boulard, Timothy H Bestor. Epigenetics Chromatin 2017
165
5

Mutations in the DNA methyltransferase gene DNMT3A cause an overgrowth syndrome with intellectual disability.
Katrina Tatton-Brown, Sheila Seal, Elise Ruark, Jenny Harmer, Emma Ramsay, Silvana Del Vecchio Duarte, Anna Zachariou, Sandra Hanks, Eleanor O'Brien, Lise Aksglaede,[...]. Nat Genet 2014
171
5

DNA methylation pathways and their crosstalk with histone methylation.
Jiamu Du, Lianna M Johnson, Steven E Jacobsen, Dinshaw J Patel. Nat Rev Mol Cell Biol 2015
420
5

Structural Basis of DNMT1 and DNMT3A-Mediated DNA Methylation.
Wendan Ren, Linfeng Gao, Jikui Song. Genes (Basel) 2018
33
12

Reprogramming DNA methylation in the mammalian life cycle: building and breaking epigenetic barriers.
Stefanie Seisenberger, Julian R Peat, Timothy A Hore, Fátima Santos, Wendy Dean, Wolf Reik. Philos Trans R Soc Lond B Biol Sci 2013
247
5

Role of Epigenetics in Biology and Human Diseases.
Azam Moosavi, Ali Motevalizadeh Ardekani. Iran Biomed J 2016
91
5

Eukaryotic cytosine methyltransferases.
Mary Grace Goll, Timothy H Bestor. Annu Rev Biochem 2005
5

Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq.
Dan Dominissini, Sharon Moshitch-Moshkovitz, Schraga Schwartz, Mali Salmon-Divon, Lior Ungar, Sivan Osenberg, Karen Cesarkas, Jasmine Jacob-Hirsch, Ninette Amariglio, Martin Kupiec,[...]. Nature 2012
5

DNA methylation and the preservation of cell identity.
Ozren Bogdanović, Ryan Lister. Curr Opin Genet Dev 2017
52
7



DNA methylation landscapes: provocative insights from epigenomics.
Miho M Suzuki, Adrian Bird. Nat Rev Genet 2008
5

Dynamic changes in histone modifications precede de novo DNA methylation in oocytes.
Kathleen R Stewart, Lenka Veselovska, Jeesun Kim, Jiahao Huang, Heba Saadeh, Shin-ichi Tomizawa, Sébastien A Smallwood, Taiping Chen, Gavin Kelsey. Genes Dev 2015
104
5

Programming and inheritance of parental DNA methylomes in mammals.
Lu Wang, Jun Zhang, Jialei Duan, Xinxing Gao, Wei Zhu, Xingyu Lu, Lu Yang, Jing Zhang, Guoqiang Li, Weimin Ci,[...]. Cell 2014
286
5

Allelic H3K27me3 to allelic DNA methylation switch maintains noncanonical imprinting in extraembryonic cells.
Zhiyuan Chen, Qiangzong Yin, Azusa Inoue, Chunxia Zhang, Yi Zhang. Sci Adv 2019
27
14

Dynamics of the epigenetic landscape during the maternal-to-zygotic transition.
Melanie A Eckersley-Maslin, Celia Alda-Catalinas, Wolf Reik. Nat Rev Mol Cell Biol 2018
117
5

A maternal-zygotic effect gene, Zfp57, maintains both maternal and paternal imprints.
Xiajun Li, Mitsuteru Ito, Fen Zhou, Neil Youngson, Xiaopan Zuo, Philip Leder, Anne C Ferguson-Smith. Dev Cell 2008
399
5


Mammalian DNA methyltransferases: new discoveries and open questions.
Humaira Gowher, Albert Jeltsch. Biochem Soc Trans 2018
56
7

DNA Methylation Signature for EZH2 Functionally Classifies Sequence Variants in Three PRC2 Complex Genes.
Sanaa Choufani, William T Gibson, Andrei L Turinsky, Brian H Y Chung, Tianren Wang, Kopal Garg, Alessandro Vitriolo, Ana S A Cohen, Sharri Cyrus, Sarah Goodman,[...]. Am J Hum Genet 2020
21
19

Genomic DNA Methylation Signatures Enable Concurrent Diagnosis and Clinical Genetic Variant Classification in Neurodevelopmental Syndromes.
Erfan Aref-Eshghi, David I Rodenhiser, Laila C Schenkel, Hanxin Lin, Cindy Skinner, Peter Ainsworth, Guillaume Paré, Rebecca L Hood, Dennis E Bulman, Kristin D Kernohan,[...]. Am J Hum Genet 2018
59
6

Genome-wide analysis of DNA methylation dynamics during early human development.
Hiroaki Okae, Hatsune Chiba, Hitoshi Hiura, Hirotaka Hamada, Akiko Sato, Takafumi Utsunomiya, Hiroyuki Kikuchi, Hiroaki Yoshida, Atsushi Tanaka, Mikita Suyama,[...]. PLoS Genet 2014
145
5

Active and passive demethylation of male and female pronuclear DNA in the mammalian zygote.
Fan Guo, Xianlong Li, Dan Liang, Tong Li, Ping Zhu, Hongshan Guo, Xinglong Wu, Lu Wen, Tian-Peng Gu, Boqiang Hu,[...]. Cell Stem Cell 2014
209
5

DNA methylation dynamics of the human preimplantation embryo.
Zachary D Smith, Michelle M Chan, Kathryn C Humm, Rahul Karnik, Shila Mekhoubad, Aviv Regev, Kevin Eggan, Alexander Meissner. Nature 2014
334
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.