A citation-based method for searching scientific literature

Richard S Marshall, Zhihua Hua, Sujina Mali, Fionn McLoughlin, Richard D Vierstra. Cell 2019
Times Cited: 130







List of co-cited articles
1987 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Autophagy: The Master of Bulk and Selective Recycling.
Richard S Marshall, Richard D Vierstra. Annu Rev Plant Biol 2018
196
38

Autophagic Degradation of the 26S Proteasome Is Mediated by the Dual ATG8/Ubiquitin Receptor RPN10 in Arabidopsis.
Richard S Marshall, Faqiang Li, David C Gemperline, Adam J Book, Richard D Vierstra. Mol Cell 2015
254
34

The LIR motif - crucial for selective autophagy.
Åsa Birna Birgisdottir, Trond Lamark, Terje Johansen. J Cell Sci 2013
502
31


p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagy.
Serhiy Pankiv, Terje Høyvarde Clausen, Trond Lamark, Andreas Brech, Jack-Ansgar Bruun, Heidi Outzen, Aud Øvervatn, Geir Bjørkøy, Terje Johansen. J Biol Chem 2007
25

Selective autophagy mediated by autophagic adapter proteins.
Terje Johansen, Trond Lamark. Autophagy 2011
24


Selective Autophagy of BES1 Mediated by DSK2 Balances Plant Growth and Survival.
Trevor M Nolan, Benjamin Brennan, Mengran Yang, Jiani Chen, Mingcai Zhang, Zhaohu Li, Xuelu Wang, Diane C Bassham, Justin Walley, Yanhai Yin. Dev Cell 2017
157
20

NBR1-mediated selective autophagy targets insoluble ubiquitinated protein aggregates in plant stress responses.
Jie Zhou, Jian Wang, Yuan Cheng, Ying-Jun Chi, Baofang Fan, Jing-Quan Yu, Zhixiang Chen. PLoS Genet 2013
199
20

The role of Atg proteins in autophagosome formation.
Noboru Mizushima, Tamotsu Yoshimori, Yoshinori Ohsumi. Annu Rev Cell Dev Biol 2011
19

A role for NBR1 in autophagosomal degradation of ubiquitinated substrates.
Vladimir Kirkin, Trond Lamark, Yu-Shin Sou, Geir Bjørkøy, Jennifer L Nunn, Jack-Ansgar Bruun, Elena Shvets, David G McEwan, Terje H Clausen, Philipp Wild,[...]. Mol Cell 2009
779
19


Arabidopsis ATG8-INTERACTING PROTEIN1 is involved in autophagy-dependent vesicular trafficking of plastid proteins to the vacuole.
Simon Michaeli, Arik Honig, Hanna Levanony, Hadas Peled-Zehavi, Gad Galili. Plant Cell 2014
119
19

The ATG1/ATG13 protein kinase complex is both a regulator and a target of autophagic recycling in Arabidopsis.
Anongpat Suttangkakul, Faqiang Li, Taijoon Chung, Richard D Vierstra. Plant Cell 2011
180
19

A ubiquitin-like system mediates protein lipidation.
Y Ichimura, T Kirisako, T Takao, Y Satomi, Y Shimonishi, N Ishihara, N Mizushima, I Tanida, E Kominami, M Ohsumi,[...]. Nature 2000
18



hfAIM: A reliable bioinformatics approach for in silico genome-wide identification of autophagy-associated Atg8-interacting motifs in various organisms.
Qingjun Xie, Oren Tzfadia, Matan Levy, Efrat Weithorn, Hadas Peled-Zehavi, Thomas Van Parys, Yves Van de Peer, Gad Galili. Autophagy 2016
49
36

Spatiotemporal Control of ULK1 Activation by NDP52 and TBK1 during Selective Autophagy.
Jose Norberto S Vargas, Chunxin Wang, Eric Bunker, Ling Hao, Dragan Maric, Giampietro Schiavo, Felix Randow, Richard J Youle. Mol Cell 2019
180
17

Cargo recognition and degradation by selective autophagy.
Damián Gatica, Vikramjit Lahiri, Daniel J Klionsky. Nat Cell Biol 2018
467
17

A BAR-domain protein SH3P2, which binds to phosphatidylinositol 3-phosphate and ATG8, regulates autophagosome formation in Arabidopsis.
Xiaohong Zhuang, Hao Wang, Sheung Kwan Lam, Caiji Gao, Xiangfeng Wang, Yi Cai, Liwen Jiang. Plant Cell 2013
144
17

ATG9 regulates autophagosome progression from the endoplasmic reticulum in Arabidopsis.
Xiaohong Zhuang, Kin Pan Chung, Yong Cui, Weili Lin, Caiji Gao, Byung-Ho Kang, Liwen Jiang. Proc Natl Acad Sci U S A 2017
127
17

Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy.
Kohki Yoshimoto, Hideki Hanaoka, Shusei Sato, Tomohiko Kato, Satoshi Tabata, Takeshi Noda, Yoshinori Ohsumi. Plant Cell 2004
387
17

Regulation of endoplasmic reticulum turnover by selective autophagy.
Aliaksandr Khaminets, Theresa Heinrich, Muriel Mari, Paolo Grumati, Antje K Huebner, Masato Akutsu, Lutz Liebmann, Alexandra Stolz, Sandor Nietzsche, Nicole Koch,[...]. Nature 2015
489
16

CCPG1 Is a Non-canonical Autophagy Cargo Receptor Essential for ER-Phagy and Pancreatic ER Proteostasis.
Matthew D Smith, Margaret E Harley, Alain J Kemp, Jimi Wills, Martin Lee, Mark Arends, Alex von Kriegsheim, Christian Behrends, Simon Wilkinson. Dev Cell 2018
195
16

Atg8-family interacting motif crucial for selective autophagy.
Nobuo N Noda, Yoshinori Ohsumi, Fuyuhiko Inagaki. FEBS Lett 2010
326
16

Autophagic nutrient recycling in Arabidopsis directed by the ATG8 and ATG12 conjugation pathways.
Allison R Thompson, Jed H Doelling, Anongpat Suttangkakul, Richard D Vierstra. Plant Physiol 2005
369
16


Linking Autophagy to Abiotic and Biotic Stress Responses.
Santiago Signorelli, Łukasz Paweł Tarkowski, Wim Van den Ende, Diane C Bassham. Trends Plant Sci 2019
90
17

Mechanistic insights into selective autophagy pathways: lessons from yeast.
Jean-Claude Farré, Suresh Subramani. Nat Rev Mol Cell Biol 2016
210
15

FIP200 Claw Domain Binding to p62 Promotes Autophagosome Formation at Ubiquitin Condensates.
Eleonora Turco, Marie Witt, Christine Abert, Tobias Bock-Bierbaum, Ming-Yuan Su, Riccardo Trapannone, Martin Sztacho, Alberto Danieli, Xiaoshan Shi, Gabriele Zaffagnini,[...]. Mol Cell 2019
131
15

Mitochondrial outer-membrane protein FUNDC1 mediates hypoxia-induced mitophagy in mammalian cells.
Lei Liu, Du Feng, Guo Chen, Ming Chen, Qiaoxia Zheng, Pingping Song, Qi Ma, Chongzhuo Zhu, Rui Wang, Wanjun Qi,[...]. Nat Cell Biol 2012
865
15

Full length RTN3 regulates turnover of tubular endoplasmic reticulum via selective autophagy.
Paolo Grumati, Giulio Morozzi, Soraya Hölper, Muriel Mari, Marie-Lena Ie Harwardt, Riqiang Yan, Stefan Müller, Fulvio Reggiori, Mike Heilemann, Ivan Dikic. Elife 2017
197
15

Receptor-mediated selective autophagy degrades the endoplasmic reticulum and the nucleus.
Keisuke Mochida, Yu Oikawa, Yayoi Kimura, Hiromi Kirisako, Hisashi Hirano, Yoshinori Ohsumi, Hitoshi Nakatogawa. Nature 2015
369
15

Selective autophagy limits cauliflower mosaic virus infection by NBR1-mediated targeting of viral capsid protein and particles.
Anders Hafrén, Jean-Luc Macia, Andrew J Love, Joel J Milner, Martin Drucker, Daniel Hofius. Proc Natl Acad Sci U S A 2017
129
15


Mechanisms of Selective Autophagy.
Gabriele Zaffagnini, Sascha Martens. J Mol Biol 2016
313
14

Structural basis of target recognition by Atg8/LC3 during selective autophagy.
Nobuo N Noda, Hiroyuki Kumeta, Hitoshi Nakatogawa, Kenji Satoo, Wakana Adachi, Junko Ishii, Yuko Fujioka, Yoshinori Ohsumi, Fuyuhiko Inagaki. Genes Cells 2008
293
14

The ubiquitin kinase PINK1 recruits autophagy receptors to induce mitophagy.
Michael Lazarou, Danielle A Sliter, Lesley A Kane, Shireen A Sarraf, Chunxin Wang, Jonathon L Burman, Dionisia P Sideris, Adam I Fogel, Richard J Youle. Nature 2015
14

Atg8 family LC3/GABARAP proteins are crucial for autophagosome-lysosome fusion but not autophagosome formation during PINK1/Parkin mitophagy and starvation.
Thanh Ngoc Nguyen, Benjamin Scott Padman, Joanne Usher, Viola Oorschot, Georg Ramm, Michael Lazarou. J Cell Biol 2016
313
14


Structural basis for sorting mechanism of p62 in selective autophagy.
Yoshinobu Ichimura, Taichi Kumanomidou, Yu-shin Sou, Tsunehiro Mizushima, Junji Ezaki, Takashi Ueno, Eiki Kominami, Takashi Yamane, Keiji Tanaka, Masaaki Komatsu. J Biol Chem 2008
550
13

Intrinsically Disordered Protein TEX264 Mediates ER-phagy.
Haruka Chino, Tomohisa Hatta, Tohru Natsume, Noboru Mizushima. Mol Cell 2019
127
13

Translocon component Sec62 acts in endoplasmic reticulum turnover during stress recovery.
Fiorenza Fumagalli, Julia Noack, Timothy J Bergmann, Eduardo Cebollero, Giorgia Brambilla Pisoni, Elisa Fasana, Ilaria Fregno, Carmela Galli, Marisa Loi, Tatiana Soldà,[...]. Nat Cell Biol 2016
214
13


NUFIP1 is a ribosome receptor for starvation-induced ribophagy.
Gregory A Wyant, Monther Abu-Remaileh, Evgeni M Frenkel, Nouf N Laqtom, Vimisha Dharamdasani, Caroline A Lewis, Sze Ham Chan, Ivonne Heinze, Alessandro Ori, David M Sabatini. Science 2018
167
13

The Cargo Receptor NDP52 Initiates Selective Autophagy by Recruiting the ULK Complex to Cytosol-Invading Bacteria.
Benjamin J Ravenhill, Keith B Boyle, Natalia von Muhlinen, Cara J Ellison, Glenn R Masson, Elsje G Otten, Agnes Foeglein, Roger Williams, Felix Randow. Mol Cell 2019
136
13


The APG8/12-activating enzyme APG7 is required for proper nutrient recycling and senescence in Arabidopsis thaliana.
Jed H Doelling, Joseph M Walker, Eric M Friedman, Allison R Thompson, Richard D Vierstra. J Biol Chem 2002
391
13

Arabidopsis cargo receptor NBR1 mediates selective autophagy of defective proteins.
Hyera Jung, Han Nim Lee, Richard S Marshall, Aaron W Lomax, Min Ji Yoon, Jimi Kim, Jeong Hun Kim, Richard D Vierstra, Taijoon Chung. J Exp Bot 2020
34
38


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.