A citation-based method for searching scientific literature

Li-Hua Fan, Zhen-Bo Wang, Qian-Nan Li, Tie-Gang Meng, Ming-Zhe Dong, Yi Hou, Ying-Chun Ouyang, Heide Schatten, Qing-Yuan Sun. Biochem Biophys Res Commun 2019
Times Cited: 7







List of co-cited articles
24 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Human mitochondrial DNA is extensively methylated in a non-CpG context.
Vibha Patil, Cyrille Cuenin, Felicia Chung, Jesus R Rodriguez Aguilera, Nora Fernandez-Jimenez, Irati Romero-Garmendia, Jose Ramon Bilbao, Vincent Cahais, Joseph Rothwell, Zdenko Herceg. Nucleic Acids Res 2019
49
42

Evidence Suggesting Absence of Mitochondrial DNA Methylation.
Mie Mechta, Lars R Ingerslev, Odile Fabre, Martin Picard, Romain Barrès. Front Genet 2017
69
42

The control region of mitochondrial DNA shows an unusual CpG and non-CpG methylation pattern.
Dina Bellizzi, Patrizia D'Aquila, Teresa Scafone, Marco Giordano, Vincenzo Riso, Andrea Riccio, Giuseppe Passarino. DNA Res 2013
155
42

CpG methylation patterns of human mitochondrial DNA.
Baojing Liu, Qingqing Du, Lu Chen, Guangping Fu, Shujin Li, Lihong Fu, Xiaojing Zhang, Chunling Ma, Cong Bin. Sci Rep 2016
92
28

Premature ageing in mice expressing defective mitochondrial DNA polymerase.
Aleksandra Trifunovic, Anna Wredenberg, Maria Falkenberg, Johannes N Spelbrink, Anja T Rovio, Carl E Bruder, Mohammad Bohlooly-Y, Sebastian Gidlöf, Anders Oldfors, Rolf Wibom,[...]. Nature 2004
28

Methylation pattern of mouse mitochondrial DNA.
Y Pollack, J Kasir, R Shemer, S Metzger, M Szyf. Nucleic Acids Res 1984
116
28

The mitochondrial DNA genetic bottleneck: inheritance and beyond.
Haixin Zhang, Stephen P Burr, Patrick F Chinnery. Essays Biochem 2018
42
28

Effect of aging on 5-hydroxymethylcytosine in brain mitochondria.
Svetlana Dzitoyeva, Hu Chen, Hari Manev. Neurobiol Aging 2012
123
28


Epigenetic regulation of motor neuron cell death through DNA methylation.
Barry A Chestnut, Qing Chang, Ann Price, Catherine Lesuisse, Margaret Wong, Lee J Martin. J Neurosci 2011
227
28


Mitochondrial Genomic Backgrounds Affect Nuclear DNA Methylation and Gene Expression.
Carolyn J Vivian, Amanda E Brinker, Stefan Graw, Devin C Koestler, Christophe Legendre, Gerald C Gooden, Bodour Salhia, Danny R Welch. Cancer Res 2017
34
28


DNA methyltransferase 1, cytosine methylation, and cytosine hydroxymethylation in mammalian mitochondria.
Lisa S Shock, Prashant V Thakkar, Erica J Peterson, Richard G Moran, Shirley M Taylor. Proc Natl Acad Sci U S A 2011
323
28



Mitochondrial DNA copy number is regulated by DNA methylation and demethylation of POLGA in stem and cancer cells and their differentiated progeny.
W Lee, J Johnson, D J Gough, J Donoghue, G L M Cagnone, V Vaghjiani, K A Brown, T G Johns, J C St John. Cell Death Dis 2015
59
28

DNA Methyltransferase1 (DNMT1) Isoform3 methylates mitochondrial genome and modulates its biology.
Sunil Kumar Saini, Kailash Chandra Mangalhara, Gopinath Prakasam, R N K Bamezai. Sci Rep 2017
42
28

The strand-biased mitochondrial DNA methylome and its regulation by DNMT3A.
Xiaoyang Dou, Jerome D Boyd-Kirkup, Joseph McDermott, Xiaoli Zhang, Fang Li, Bowen Rong, Rui Zhang, Bisi Miao, Peilin Chen, Hao Cheng,[...]. Genome Res 2019
28
28

DNA methyltransferase 1 mutations and mitochondrial pathology: is mtDNA methylated?
Alessandra Maresca, Mirko Zaffagnini, Leonardo Caporali, Valerio Carelli, Claudia Zanna. Front Genet 2015
41
28


Global DNA methylation levels are modulated by mitochondrial DNA variants.
Dina Bellizzi, Patrizia D'Aquila, Marco Giordano, Alberto Montesanto, Giuseppe Passarino. Epigenomics 2012
79
28

Mitochondrial DNMT3A and DNA methylation in skeletal muscle and CNS of transgenic mouse models of ALS.
Margaret Wong, Barry Gertz, Barry A Chestnut, Lee J Martin. Front Cell Neurosci 2013
93
28

A novel role for mitochondria in regulating epigenetic modification in the nucleus.
Dominic J Smiraglia, Mariola Kulawiec, Gaia L Bistulfi, Sampa Ghoshal Gupta, Keshav K Singh. Cancer Biol Ther 2008
136
28

Variation in germline mtDNA heteroplasmy is determined prenatally but modified during subsequent transmission.
Christoph Freyer, Lynsey M Cree, Arnaud Mourier, James B Stewart, Camilla Koolmeister, Dusanka Milenkovic, Timothy Wai, Vasileios I Floros, Erik Hagström, Emmanouella E Chatzidaki,[...]. Nat Genet 2012
91
14

Large-scale genetic analysis reveals mammalian mtDNA heteroplasmy dynamics and variance increase through lifetimes and generations.
Joerg P Burgstaller, Thomas Kolbe, Vitezslav Havlicek, Stephanie Hembach, Joanna Poulton, Jaroslav Piálek, Ralf Steinborn, Thomas Rülicke, Gottfried Brem, Nick S Jones,[...]. Nat Commun 2018
28
14


Trimmomatic: a flexible trimmer for Illumina sequence data.
Anthony M Bolger, Marc Lohse, Bjoern Usadel. Bioinformatics 2014
14

Genetic basis of Alzheimer's dementia: role of mtDNA mutations.
M Grazina, J Pratas, F Silva, S Oliveira, I Santana, C Oliveira. Genes Brain Behav 2006
34
14

Precise determination of mitochondrial DNA copy number in human skeletal and cardiac muscle by a PCR-based assay: lack of change of copy number with age.
Francis J Miller, Franklin L Rosenfeldt, Chunfang Zhang, Anthony W Linnane, Phillip Nagley. Nucleic Acids Res 2003
218
14

Mitochondrial point mutations do not limit the natural lifespan of mice.
Marc Vermulst, Jason H Bielas, Gregory C Kujoth, Warren C Ladiges, Peter S Rabinovitch, Tomas A Prolla, Lawrence A Loeb. Nat Genet 2007
275
14


Germline mutation rates and the long-term phenotypic effects of mutation accumulation in wild-type laboratory mice and mutator mice.
Arikuni Uchimura, Mayumi Higuchi, Yohei Minakuchi, Mizuki Ohno, Atsushi Toyoda, Asao Fujiyama, Ikuo Miura, Shigeharu Wakana, Jo Nishino, Takeshi Yagi. Genome Res 2015
72
14

Ultra-deep sequencing of mouse mitochondrial DNA: mutational patterns and their origins.
Adam Ameur, James B Stewart, Christoph Freyer, Erik Hagström, Max Ingman, Nils-Göran Larsson, Ulf Gyllensten. PLoS Genet 2011
118
14

Variation in the mutation rate across mammalian genomes.
Alan Hodgkinson, Adam Eyre-Walker. Nat Rev Genet 2011
230
14

Variation in genome-wide mutation rates within and between human families.
Donald F Conrad, Jonathan E M Keebler, Mark A DePristo, Sarah J Lindsay, Yujun Zhang, Ferran Casals, Youssef Idaghdour, Chris L Hartl, Carlos Torroja, Kiran V Garimella,[...]. Nat Genet 2011
345
14

Somatic mtDNA mutation spectra in the aging human putamen.
Siôn L Williams, Deborah C Mash, Stephan Züchner, Carlos T Moraes. PLoS Genet 2013
49
14

Rates and mechanisms of bacterial mutagenesis from maximum-depth sequencing.
Justin Jee, Aviram Rasouly, Ilya Shamovsky, Yonatan Akivis, Susan R Steinman, Bud Mishra, Evgeny Nudler. Nature 2016
54
14

Super-resolution microscopy reveals that mammalian mitochondrial nucleoids have a uniform size and frequently contain a single copy of mtDNA.
Christian Kukat, Christian A Wurm, Henrik Spåhr, Maria Falkenberg, Nils-Göran Larsson, Stefan Jakobs. Proc Natl Acad Sci U S A 2011
299
14


Dissemination of scientific software with Galaxy ToolShed.
Daniel Blankenberg, Gregory Von Kuster, Emil Bouvier, Dannon Baker, Enis Afgan, Nicholas Stoler, James Taylor, Anton Nekrutenko. Genome Biol 2014
99
14

Detection of Ultra-Rare Mitochondrial Mutations in Breast Stem Cells by Duplex Sequencing.
Eun Hyun Ahn, Kensen Hirohata, Brendan F Kohrn, Edward J Fox, Chia-Cheng Chang, Lawrence A Loeb. PLoS One 2015
18
14

Complete sequence of human mitochondrial DNA obtained by combining multiple displacement amplification and next-generation sequencing on a single oocyte.
Massimo Ancora, Massimiliano Orsini, Alessia Colosimo, Maurilia Marcacci, Valentina Russo, Maria De Santo, Marco D'Aurora, Liborio Stuppia, Barbara Barboni, Cesare Cammà,[...]. Mitochondrial DNA A DNA Mapp Seq Anal 2017
4
25

Deep sequencing shows that oocytes are not prone to accumulate mtDNA heteroplasmic mutations during ovarian ageing.
L Boucret, C Bris, V Seegers, D Goudenège, V Desquiret-Dumas, M Domin-Bernhard, V Ferré-L'Hotellier, P E Bouet, P Descamps, P Reynier,[...]. Hum Reprod 2017
15
14


Parental influence on human germline de novo mutations in 1,548 trios from Iceland.
Hákon Jónsson, Patrick Sulem, Birte Kehr, Snaedis Kristmundsdottir, Florian Zink, Eirikur Hjartarson, Marteinn T Hardarson, Kristjan E Hjorleifsson, Hannes P Eggertsson, Sigurjon Axel Gudjonsson,[...]. Nature 2017
151
14

Basic local alignment search tool.
S F Altschul, W Gish, W Miller, E W Myers, D J Lipman. J Mol Biol 1990
14

Timing, rates and spectra of human germline mutation.
Raheleh Rahbari, Arthur Wuster, Sarah J Lindsay, Robert J Hardwick, Ludmil B Alexandrov, Saeed Al Turki, Anna Dominiczak, Andrew Morris, David Porteous, Blair Smith,[...]. Nat Genet 2016
244
14

Oxidative damage diminishes mitochondrial DNA polymerase replication fidelity.
Andrew P Anderson, Xuemei Luo, William Russell, Y Whitney Yin. Nucleic Acids Res 2020
20
14

Homopolymeric tract heteroplasmy in mtDNA from tissues and single oocytes: support for a genetic bottleneck.
D R Marchington, G M Hartshorne, D Barlow, J Poulton. Am J Hum Genet 1997
123
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.