A citation-based method for searching scientific literature

Hiroto Izumi, Keiko Funa. Cells 2019
Times Cited: 2







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Small-molecule affinity capture of DNA/RNA quadruplexes and their identification in vitro and in vivo through the G4RP protocol.
Isaline Renard, Michael Grandmougin, Apolline Roux, Sunny Y Yang, Pauline Lejault, Marc Pirrotta, Judy M Y Wong, David Monchaud. Nucleic Acids Res 2019
11
50

C9orf72-mediated ALS and FTD: multiple pathways to disease.
Rubika Balendra, Adrian M Isaacs. Nat Rev Neurol 2018
187
50

Stimulation of ribosomal frameshifting by RNA G-quadruplex structures.
Chien-Hung Yu, Marie-Paule Teulade-Fichou, René C L Olsthoorn. Nucleic Acids Res 2014
42
50

The structural diversity of C-rich DNA aggregates: unusual self-assembly of beetle-like nanostructures.
A D Protopopova, V B Tsvetkov, A M Varizhuk, N A Barinov, V V Podgorsky, D V Klinov, G E Pozmogova. Phys Chem Chem Phys 2018
8
50

An RNA-binding Protein, Lin28, Recognizes and Remodels G-quartets in the MicroRNAs (miRNAs) and mRNAs It Regulates.
Elizabeth O'Day, Minh T N Le, Shunsuke Imai, Shen Mynn Tan, Rory Kirchner, Haribabu Arthanari, Oliver Hofmann, Gerhard Wagner, Judy Lieberman. J Biol Chem 2015
16
50

G-quadruplexes regulate Epstein-Barr virus-encoded nuclear antigen 1 mRNA translation.
Pierre Murat, Jie Zhong, Lea Lekieffre, Nathan P Cowieson, Jennifer L Clancy, Thomas Preiss, Shankar Balasubramanian, Rajiv Khanna, Judy Tellam. Nat Chem Biol 2014
137
50

RNA Helicase DDX1 Converts RNA G-Quadruplex Structures into R-Loops to Promote IgH Class Switch Recombination.
Claudia Ribeiro de Almeida, Somdutta Dhir, Ashish Dhir, Amin E Moghaddam, Quentin Sattentau, Anton Meinhart, Nicholas J Proudfoot. Mol Cell 2018
62
50

The RNA Stem-Loop to G-Quadruplex Equilibrium Controls Mature MicroRNA Production inside the Cell.
Satyaprakash Pandey, Prachi Agarwala, Gopal G Jayaraj, Raimundo Gargallo, Souvik Maiti. Biochemistry 2015
47
50


G-Quadruplex Secondary Structure Obtained from Circular Dichroism Spectroscopy.
Rafael Del Villar-Guerra, John O Trent, Jonathan B Chaires. Angew Chem Int Ed Engl 2018
133
50

A crystallographic and modelling study of a human telomeric RNA (TERRA) quadruplex.
Gavin W Collie, Shozeb M Haider, Stephen Neidle, Gary N Parkinson. Nucleic Acids Res 2010
146
50


Metal Cations in G-Quadruplex Folding and Stability.
Debmalya Bhattacharyya, Gayan Mirihana Arachchilage, Soumitra Basu. Front Chem 2016
185
50



Identification of LARK as a novel and conserved G-quadruplex binding protein in invertebrates and vertebrates.
Kangkang Niu, Lijun Xiang, Ying Jin, Yuling Peng, Feng Wu, Wenhuan Tang, Xiaojuan Zhang, Huimin Deng, Hui Xiang, Sheng Li,[...]. Nucleic Acids Res 2019
11
50

Geometric formalism for DNA quadruplex folding.
Mateus Webba da Silva. Chemistry 2007
144
50

Guanine-vacancy-bearing G-quadruplexes responsive to guanine derivatives.
Xin-min Li, Ke-wei Zheng, Jia-yu Zhang, Hong-he Liu, Yi-de He, Bi-feng Yuan, Yu-hua Hao, Zheng Tan. Proc Natl Acad Sci U S A 2015
56
50

The current status of vertebrate cellular mRNA IRESs.
Richard J Jackson. Cold Spring Harb Perspect Biol 2013
88
50

FRAXE-associated mental retardation protein (FMR2) is an RNA-binding protein with high affinity for G-quartet RNA forming structure.
Mounia Bensaid, Mireille Melko, Elias G Bechara, Laetitia Davidovic, Antonio Berretta, Maria Vincenza Catania, Jozef Gecz, Enzo Lalli, Barbara Bardoni. Nucleic Acids Res 2009
46
50

R-Loops as Cellular Regulators and Genomic Threats.
Madzia P Crossley, Michael Bocek, Karlene A Cimprich. Mol Cell 2019
162
50

RNA G-quadruplexes at upstream open reading frames cause DHX36- and DHX9-dependent translation of human mRNAs.
Pierre Murat, Giovanni Marsico, Barbara Herdy, Avazeh T Ghanbarian, Guillem Portella, Shankar Balasubramanian. Genome Biol 2018
48
50


G-quadruplex structures mark human regulatory chromatin.
Robert Hänsel-Hertsch, Dario Beraldi, Stefanie V Lensing, Giovanni Marsico, Katherine Zyner, Aled Parry, Marco Di Antonio, Jeremy Pike, Hiroshi Kimura, Masashi Narita,[...]. Nat Genet 2016
318
50

RNA G-quadruplex is resolved by repetitive and ATP-dependent mechanism of DHX36.
Ramreddy Tippana, Michael C Chen, Natalia A Demeshkina, Adrian R Ferré-D'Amaré, Sua Myong. Nat Commun 2019
24
50

Polyelectrolyte effects in G-quadruplexes.
Byul G Kim, Yuen Lai Shek, Tigran V Chalikian. Biophys Chem 2013
13
50

Tracking RNA with light: selection, structure, and design of fluorescence turn-on RNA aptamers.
Robert J Trachman, Adrian R Ferré-D'Amaré. Q Rev Biophys 2019
18
50



The Human CCHC-type Zinc Finger Nucleic Acid-Binding Protein Binds G-Rich Elements in Target mRNA Coding Sequences and Promotes Translation.
Daniel Benhalevy, Sanjay K Gupta, Charles H Danan, Suman Ghosal, Hong-Wei Sun, Hinke G Kazemier, Katrin Paeschke, Markus Hafner, Stefan A Juranek. Cell Rep 2017
52
50


DNA and RNA quadruplex-binding proteins.
Václav Brázda, Lucia Hároníková, Jack C C Liao, Miroslav Fojta. Int J Mol Sci 2014
140
50

Insights into G-quadruplex specific recognition by the DEAH-box helicase RHAU: Solution structure of a peptide-quadruplex complex.
Brahim Heddi, Vee Vee Cheong, Herry Martadinata, Anh Tuân Phan. Proc Natl Acad Sci U S A 2015
63
50

Discrimination of common and unique RNA-binding activities among Fragile X mental retardation protein paralogs.
Jennifer C Darnell, Claire E Fraser, Olga Mostovetsky, Robert B Darnell. Hum Mol Genet 2009
75
50

Stable G-quadruplex enabling sequences are selected against by the context-dependent codon bias.
Gayan Mirihana Arachchilage, Madara Hetti Arachchilage, Aparna Venkataraman, Helen Piontkivska, Soumitra Basu. Gene 2019
8
50

DHX36 prevents the accumulation of translationally inactive mRNAs with G4-structures in untranslated regions.
Markus Sauer, Stefan A Juranek, James Marks, Alessio De Magis, Hinke G Kazemier, Daniel Hilbig, Daniel Benhalevy, Xiantao Wang, Markus Hafner, Katrin Paeschke. Nat Commun 2019
40
50




Identification of G-Quadruplex-Binding Protein from the Exploration of RGG Motif/G-Quadruplex Interactions.
Zhou-Li Huang, Jing Dai, Wen-Hua Luo, Xiang-Gui Wang, Jia-Heng Tan, Shuo-Bin Chen, Zhi-Shu Huang. J Am Chem Soc 2018
23
50

Co-transcriptional formation of DNA:RNA hybrid G-quadruplex and potential function as constitutional cis element for transcription control.
Ke-wei Zheng, Shan Xiao, Jia-quan Liu, Jia-yu Zhang, Yu-hua Hao, Zheng Tan. Nucleic Acids Res 2013
69
50

Molecular modeling of nucleic acid structure.
T E Cheatham, B R Brooks, P A Kollman. Curr Protoc Nucleic Acid Chem 2001
9
50

Atlas of Subcellular RNA Localization Revealed by APEX-Seq.
Furqan M Fazal, Shuo Han, Kevin R Parker, Pornchai Kaewsapsak, Jin Xu, Alistair N Boettiger, Howard Y Chang, Alice Y Ting. Cell 2019
128
50

Structural basis of G-quadruplex unfolding by the DEAH/RHA helicase DHX36.
Michael C Chen, Ramreddy Tippana, Natalia A Demeshkina, Pierre Murat, Shankar Balasubramanian, Sua Myong, Adrian R Ferré-D'Amaré. Nature 2018
95
50

G-quadruplex structures in TP53 intron 3: role in alternative splicing and in production of p53 mRNA isoforms.
Virginie Marcel, Phong L T Tran, Charlotte Sagne, Ghyslaine Martel-Planche, Laurence Vaslin, Marie-Paule Teulade-Fichou, Janet Hall, Jean-Louis Mergny, Pierre Hainaut, Eric Van Dyck. Carcinogenesis 2011
137
50

Whole genome experimental maps of DNA G-quadruplexes in multiple species.
Giovanni Marsico, Vicki S Chambers, Aleksandr B Sahakyan, Patrick McCauley, Jonathan M Boutell, Marco Di Antonio, Shankar Balasubramanian. Nucleic Acids Res 2019
85
50


The Role of RNA in Biological Phase Separations.
Marta M Fay, Paul J Anderson. J Mol Biol 2018
41
50

The Amino Acid Composition of Quadruplex Binding Proteins Reveals a Shared Motif and Predicts New Potential Quadruplex Interactors.
Václav Brázda, Jiří Červeň, Martin Bartas, Nikol Mikysková, Jan Coufal, Petr Pečinka. Molecules 2018
20
50



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.