A citation-based method for searching scientific literature

Gitalee Sarker, Wenfei Sun, David Rosenkranz, Pawel Pelczar, Lennart Opitz, Vissarion Efthymiou, Christian Wolfrum, Daria Peleg-Raibstein. Proc Natl Acad Sci U S A 2019
Times Cited: 56







List of co-cited articles
647 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Sperm tsRNAs contribute to intergenerational inheritance of an acquired metabolic disorder.
Qi Chen, Menghong Yan, Zhonghong Cao, Xin Li, Yunfang Zhang, Junchao Shi, Gui-hai Feng, Hongying Peng, Xudong Zhang, Ying Zhang,[...]. Science 2016
611
80

Biogenesis and function of tRNA fragments during sperm maturation and fertilization in mammals.
Upasna Sharma, Colin C Conine, Jeremy M Shea, Ana Boskovic, Alan G Derr, Xin Y Bing, Clemence Belleannee, Alper Kucukural, Ryan W Serra, Fengyun Sun,[...]. Science 2016
600
75

Dnmt2 mediates intergenerational transmission of paternally acquired metabolic disorders through sperm small non-coding RNAs.
Yunfang Zhang, Xudong Zhang, Junchao Shi, Francesca Tuorto, Xin Li, Yusheng Liu, Reinhard Liebers, Liwen Zhang, Yongcun Qu, Jingjing Qian,[...]. Nat Cell Biol 2018
163
55

A novel class of tRNA-derived small RNAs extremely enriched in mature mouse sperm.
Hongying Peng, Junchao Shi, Ying Zhang, He Zhang, Shangying Liao, Wei Li, Li Lei, Chunsheng Han, Lina Ning, Yujing Cao,[...]. Cell Res 2012
190
41

LTR-Retrotransposon Control by tRNA-Derived Small RNAs.
Andrea J Schorn, Michael J Gutbrod, Chantal LeBlanc, Rob Martienssen. Cell 2017
178
35

RNA-mediated paternal heredity of diet-induced obesity and metabolic disorders.
Valérie Grandjean, Sandra Fourré, Diana Andrea Fernandes De Abreu, Marie-Alix Derieppe, Jean-Jacques Remy, Minoo Rassoulzadegan. Sci Rep 2015
194
32

Implication of sperm RNAs in transgenerational inheritance of the effects of early trauma in mice.
Katharina Gapp, Ali Jawaid, Peter Sarkies, Johannes Bohacek, Pawel Pelczar, Julien Prados, Laurent Farinelli, Eric Miska, Isabelle M Mansuy. Nat Neurosci 2014
616
30


Angiogenin cleaves tRNA and promotes stress-induced translational repression.
Satoshi Yamasaki, Pavel Ivanov, Guo-Fu Hu, Paul Anderson. J Cell Biol 2009
528
30

A transfer-RNA-derived small RNA regulates ribosome biogenesis.
Hak Kyun Kim, Gabriele Fuchs, Shengchun Wang, Wei Wei, Yue Zhang, Hyesuk Park, Biswajoy Roy-Chaudhuri, Pan Li, Jianpeng Xu, Kirk Chu,[...]. Nature 2017
183
30

Dynamic expression of tRNA-derived small RNAs define cellular states.
Srikar Krishna, Daniel Gr Yim, Vairavan Lakshmanan, Varsha Tirumalai, Judice Ly Koh, Jung Eun Park, Jit Kong Cheong, Joo Leng Low, Michelle Js Lim, Siu Kwan Sze,[...]. EMBO Rep 2019
49
32

Endogenous tRNA-Derived Fragments Suppress Breast Cancer Progression via YBX1 Displacement.
Hani Goodarzi, Xuhang Liu, Hoang C B Nguyen, Steven Zhang, Lisa Fish, Sohail F Tavazoie. Cell 2015
385
28


Human sperm displays rapid responses to diet.
Daniel Nätt, Unn Kugelberg, Eduard Casas, Elizabeth Nedstrand, Stefan Zalavary, Pontus Henriksson, Carola Nijm, Julia Jäderquist, Johanna Sandborg, Eva Flinke,[...]. PLoS Biol 2019
53
30

Pseudouridylation of tRNA-Derived Fragments Steers Translational Control in Stem Cells.
Nicola Guzzi, Maciej Cieśla, Phuong Cao Thi Ngoc, Stefan Lang, Sonali Arora, Marios Dimitriou, Kristyna Pimková, Mikael N E Sommarin, Roberto Munita, Michal Lubas,[...]. Cell 2018
162
26

Sperm RNA code programmes the metabolic health of offspring.
Yunfang Zhang, Junchao Shi, Minoo Rassoulzadegan, Francesca Tuorto, Qi Chen. Nat Rev Endocrinol 2019
72
26

A novel class of small RNAs: tRNA-derived RNA fragments (tRFs).
Yong Sun Lee, Yoshiyuki Shibata, Ankit Malhotra, Anindya Dutta. Genes Dev 2009
658
26

Small RNAs Are Trafficked from the Epididymis to Developing Mammalian Sperm.
Upasna Sharma, Fengyun Sun, Colin C Conine, Brian Reichholf, Shweta Kukreja, Veronika A Herzog, Stefan L Ameres, Oliver J Rando. Dev Cell 2018
146
25

Angiogenin-induced tRNA fragments inhibit translation initiation.
Pavel Ivanov, Mohamed M Emara, Judit Villen, Steven P Gygi, Paul Anderson. Mol Cell 2011
552
25

Sex hormone-dependent tRNA halves enhance cell proliferation in breast and prostate cancers.
Shozo Honda, Phillipe Loher, Megumi Shigematsu, Juan P Palazzo, Ryusuke Suzuki, Issei Imoto, Isidore Rigoutsos, Yohei Kirino. Proc Natl Acad Sci U S A 2015
185
25

Transgenerational epigenetic programming via sperm microRNA recapitulates effects of paternal stress.
Ali B Rodgers, Christopher P Morgan, N Adrian Leu, Tracy L Bale. Proc Natl Acad Sci U S A 2015
358
23

Paternally induced transgenerational environmental reprogramming of metabolic gene expression in mammals.
Benjamin R Carone, Lucas Fauquier, Naomi Habib, Jeremy M Shea, Caroline E Hart, Ruowang Li, Christoph Bock, Chengjian Li, Hongcang Gu, Phillip D Zamore,[...]. Cell 2010
707
21

High-fat diet reprograms the epigenome of rat spermatozoa and transgenerationally affects metabolism of the offspring.
Thais de Castro Barbosa, Lars R Ingerslev, Petter S Alm, Soetkin Versteyhe, Julie Massart, Morten Rasmussen, Ida Donkin, Rasmus Sjögren, Jonathan M Mudry, Laurène Vetterli,[...]. Mol Metab 2015
180
21

tRNA cleavage is a conserved response to oxidative stress in eukaryotes.
Debrah M Thompson, Cheng Lu, Pamela J Green, Roy Parker. RNA 2008
375
21

tRNA-derived small RNAs target transposable element transcripts.
German Martinez, Sarah G Choudury, R Keith Slotkin. Nucleic Acids Res 2017
134
21


Obesity and Bariatric Surgery Drive Epigenetic Variation of Spermatozoa in Humans.
Ida Donkin, Soetkin Versteyhe, Lars R Ingerslev, Kui Qian, Mie Mechta, Loa Nordkap, Brynjulf Mortensen, Emil Vincent R Appel, Niels Jørgensen, Viggo B Kristiansen,[...]. Cell Metab 2016
264
19

Small RNAs Gained during Epididymal Transit of Sperm Are Essential for Embryonic Development in Mice.
Colin C Conine, Fengyun Sun, Lina Song, Jaime A Rivera-Pérez, Oliver J Rando. Dev Cell 2018
136
19

tRNA fragments (tRFs) guide Ago to regulate gene expression post-transcriptionally in a Dicer-independent manner.
Canan Kuscu, Pankaj Kumar, Manjari Kiran, Zhangli Su, Asrar Malik, Anindya Dutta. RNA 2018
142
19

Angiogenin-cleaved tRNA halves interact with cytochrome c, protecting cells from apoptosis during osmotic stress.
Mridusmita Saikia, Raul Jobava, Marc Parisien, Andrea Putnam, Dawid Krokowski, Xing-Huang Gao, Bo-Jhih Guan, Yiyuan Yuan, Eckhard Jankowsky, Zhaoyang Feng,[...]. Mol Cell Biol 2014
158
19

RNA cytosine methylation by Dnmt2 and NSun2 promotes tRNA stability and protein synthesis.
Francesca Tuorto, Reinhard Liebers, Tanja Musch, Matthias Schaefer, Sarah Hofmann, Stefanie Kellner, Michaela Frye, Mark Helm, Georg Stoecklin, Frank Lyko. Nat Struct Mol Biol 2012
298
17


RNA-mediated non-mendelian inheritance of an epigenetic change in the mouse.
Minoo Rassoulzadegan, Valérie Grandjean, Pierre Gounon, Stéphane Vincent, Isabelle Gillot, François Cuzin. Nature 2006
548
17

tRNA-derived microRNA modulates proliferation and the DNA damage response and is down-regulated in B cell lymphoma.
Roy L Maute, Christof Schneider, Pavel Sumazin, Antony Holmes, Andrea Califano, Katia Basso, Riccardo Dalla-Favera. Proc Natl Acad Sci U S A 2013
331
17

Filtering of deep sequencing data reveals the existence of abundant Dicer-dependent small RNAs derived from tRNAs.
Christian Cole, Andrew Sobala, Cheng Lu, Shawn R Thatcher, Andrew Bowman, John W S Brown, Pamela J Green, Geoffrey J Barton, Gyorgy Hutvagner. RNA 2009
416
17

Stress induces tRNA cleavage by angiogenin in mammalian cells.
Hanjiang Fu, Junjun Feng, Qin Liu, Fang Sun, Yi Tie, Jie Zhu, Ruiyun Xing, Zhixian Sun, Xiaofei Zheng. FEBS Lett 2009
327
17

In utero effects. In utero undernourishment perturbs the adult sperm methylome and intergenerational metabolism.
Elizabeth J Radford, Mitsuteru Ito, Hui Shi, Jennifer A Corish, Kazuki Yamazawa, Elvira Isganaitis, Stefanie Seisenberger, Timothy A Hore, Wolf Reik, Serap Erkek,[...]. Science 2014
382
16

RNA methylation by Dnmt2 protects transfer RNAs against stress-induced cleavage.
Matthias Schaefer, Tim Pollex, Katharina Hanna, Francesca Tuorto, Madeleine Meusburger, Mark Helm, Frank Lyko. Genes Dev 2010
417
16

Disruption of histone methylation in developing sperm impairs offspring health transgenerationally.
Keith Siklenka, Serap Erkek, Maren Godmann, Romain Lambrot, Serge McGraw, Christine Lafleur, Tamara Cohen, Jianguo Xia, Matthew Suderman, Michael Hallett,[...]. Science 2015
248
16

Alterations in sperm long RNA contribute to the epigenetic inheritance of the effects of postnatal trauma.
K Gapp, G van Steenwyk, P L Germain, W Matsushima, K L M Rudolph, F Manuella, M Roszkowski, G Vernaz, T Ghosh, P Pelczar,[...]. Mol Psychiatry 2020
54
16

Chronic high-fat diet in fathers programs β-cell dysfunction in female rat offspring.
Sheau-Fang Ng, Ruby C Y Lin, D Ross Laybutt, Romain Barres, Julie A Owens, Margaret J Morris. Nature 2010
826
16

Biogenesis and Function of Transfer RNA-Related Fragments (tRFs).
Pankaj Kumar, Canan Kuscu, Anindya Dutta. Trends Biochem Sci 2016
209
16

5' tRNA halves are present as abundant complexes in serum, concentrated in blood cells, and modulated by aging and calorie restriction.
Joseph M Dhahbi, Stephen R Spindler, Hani Atamna, Amy Yamakawa, Dario Boffelli, Patricia Mote, David I K Martin. BMC Genomics 2013
140
16

A tRNA-derived fragment competes with mRNA for ribosome binding and regulates translation during stress.
Jennifer Gebetsberger, Leander Wyss, Anna M Mleczko, Julia Reuther, Norbert Polacek. RNA Biol 2017
100
16

G-quadruplex structures contribute to the neuroprotective effects of angiogenin-induced tRNA fragments.
Pavel Ivanov, Elizabeth O'Day, Mohamed M Emara, Gerhard Wagner, Judy Lieberman, Paul Anderson. Proc Natl Acad Sci U S A 2014
186
16

Epigenetic germline inheritance of diet-induced obesity and insulin resistance.
Peter Huypens, Steffen Sass, Moya Wu, Daniela Dyckhoff, Matthias Tschöp, Fabian Theis, Susan Marschall, Martin Hrabě de Angelis, Johannes Beckers. Nat Genet 2016
169
14

Paternal stress exposure alters sperm microRNA content and reprograms offspring HPA stress axis regulation.
Ali B Rodgers, Christopher P Morgan, Stefanie L Bronson, Sonia Revello, Tracy L Bale. J Neurosci 2013
430
14

tRFdb: a database for transfer RNA fragments.
Pankaj Kumar, Suresh B Mudunuri, Jordan Anaya, Anindya Dutta. Nucleic Acids Res 2015
127
14

tRF/miR-1280 Suppresses Stem Cell-like Cells and Metastasis in Colorectal Cancer.
Bingqing Huang, Huipeng Yang, Xixi Cheng, Dan Wang, Shuyu Fu, Wencui Shen, Qi Zhang, Lijuan Zhang, Zhenyi Xue, Yan Li,[...]. Cancer Res 2017
100
14

Human tRNA-derived small RNAs in the global regulation of RNA silencing.
Dirk Haussecker, Yong Huang, Ashley Lau, Poornima Parameswaran, Andrew Z Fire, Mark A Kay. RNA 2010
447
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.