A citation-based method for searching scientific literature

Ian T Fiddes, Alex A Pollen, Jonathan M Davis, James M Sikela. Hum Genet 2019
Times Cited: 8







List of co-cited articles
30 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


DUF1220-domain copy number implicated in human brain-size pathology and evolution.
Laura J Dumas, Majesta S O'Bleness, Jonathan M Davis, C Michael Dickens, Nathan Anderson, J G Keeney, Jay Jackson, Megan Sikela, Armin Raznahan, Jay Giedd,[...]. Am J Hum Genet 2012
67
62

A novel gene family NBPF: intricate structure generated by gene duplications during primate evolution.
Karl Vandepoele, Nadine Van Roy, Katrien Staes, Frank Speleman, Frans van Roy. Mol Biol Evol 2005
94
62

Changing the name of the NBPF/DUF1220 domain to the Olduvai domain.
James M Sikela, Frans van Roy. F1000Res 2017
8
50

Human lineage-specific amplification, selection, and neuronal expression of DUF1220 domains.
Magdalena C Popesco, Erik J Maclaren, Janet Hopkins, Laura Dumas, Michael Cox, Lynne Meltesen, Loris McGavran, Gerald J Wyckoff, James M Sikela. Science 2006
125
50

Recurrent rearrangements of chromosome 1q21.1 and variable pediatric phenotypes.
Heather C Mefford, Andrew J Sharp, Carl Baker, Andy Itsara, Zhaoshi Jiang, Karen Buysse, Shuwen Huang, Viv K Maloney, John A Crolla, Diana Baralle,[...]. N Engl J Med 2008
514
50

Recurrent reciprocal 1q21.1 deletions and duplications associated with microcephaly or macrocephaly and developmental and behavioral abnormalities.
Nicola Brunetti-Pierri, Jonathan S Berg, Fernando Scaglia, John Belmont, Carlos A Bacino, Trilochan Sahoo, Seema R Lalani, Brett Graham, Brendan Lee, Marwan Shinawi,[...]. Nat Genet 2008
389
50

Human-Specific NOTCH2NL Genes Affect Notch Signaling and Cortical Neurogenesis.
Ian T Fiddes, Gerrald A Lodewijk, Meghan Mooring, Colleen M Bosworth, Adam D Ewing, Gary L Mantalas, Adam M Novak, Anouk van den Bout, Alex Bishara, Jimi L Rosenkrantz,[...]. Cell 2018
154
50

Human-Specific NOTCH2NL Genes Expand Cortical Neurogenesis through Delta/Notch Regulation.
Ikuo K Suzuki, David Gacquer, Roxane Van Heurck, Devesh Kumar, Marta Wojno, Angéline Bilheu, Adèle Herpoel, Nelle Lambert, Julian Cheron, Franck Polleux,[...]. Cell 2018
118
50

DUF1220 dosage is linearly associated with increasing severity of the three primary symptoms of autism.
Jonathan M Davis, Veronica B Searles, Nathan Anderson, Jonathon Keeney, Laura Dumas, James M Sikela. PLoS Genet 2014
32
37

Evolutionary history and genome organization of DUF1220 protein domains.
Majesta S O'Bleness, C Michael Dickens, Laura J Dumas, Hildegard Kehrer-Sawatzki, Gerald J Wyckoff, James M Sikela. G3 (Bethesda) 2012
45
37

DUF1220 protein domains drive proliferation in human neural stem cells and are associated with increased cortical volume in anthropoid primates.
J G Keeney, J M Davis, J Siegenthaler, M D Post, B S Nielsen, W D Hopkins, J M Sikela. Brain Struct Funct 2015
33
37

DUF1220 domains, cognitive disease, and human brain evolution.
L Dumas, J M Sikela. Cold Spring Harb Symp Quant Biol 2009
41
37

Finished sequence and assembly of the DUF1220-rich 1q21 region using a haploid human genome.
Majesta O'Bleness, Veronica B Searles, C Michael Dickens, David Astling, Derek Albracht, Angel C Y Mak, Yvonne Y Y Lai, Chin Lin, Catherine Chu, Tina Graves,[...]. BMC Genomics 2014
29
37

High resolution measurement of DUF1220 domain copy number from whole genome sequence data.
David P Astling, Ilea E Heft, Kenneth L Jones, James M Sikela. BMC Genomics 2017
8
37


DUF1220 copy number is linearly associated with increased cognitive function as measured by total IQ and mathematical aptitude scores.
Jonathon M Davis, Veronica B Searles, Nathan Anderson, Jonathon Keeney, Armin Raznahan, L John Horwood, David M Fergusson, Martin A Kennedy, Jay Giedd, James M Sikela. Hum Genet 2015
17
25



A Third Linear Association Between Olduvai (DUF1220) Copy Number and Severity of the Classic Symptoms of Inherited Autism.
Jonathan M Davis, Ilea Heft, Stephen W Scherer, James M Sikela. Am J Psychiatry 2019
6
33

The case for DUF1220 domain dosage as a primary contributor to anthropoid brain expansion.
Jonathon G Keeney, Laura Dumas, James M Sikela. Front Hum Neurosci 2014
23
25

Analysis of the largest tandemly repeated DNA families in the human genome.
Peter E Warburton, Dan Hasson, Flavia Guillem, Chloe Lescale, Xiaoping Jin, Gyorgy Abrusan. BMC Genomics 2008
91
25

Evolution of human-specific neural SRGAP2 genes by incomplete segmental duplication.
Megan Y Dennis, Xander Nuttle, Peter H Sudmant, Francesca Antonacci, Tina A Graves, Mikhail Nefedov, Jill A Rosenfeld, Saba Sajjadian, Maika Malig, Holland Kotkiewicz,[...]. Cell 2012
192
25

Clinical phenotype of the recurrent 1q21.1 copy-number variant.
Raphael Bernier, Kyle J Steinman, Beau Reilly, Arianne Stevens Wallace, Elliott H Sherr, Nicholas Pojman, Heather C Mefford, Jennifer Gerdts, Rachel Earl, Ellen Hanson,[...]. Genet Med 2016
73
25

Association of Rare Copy Number Variants With Risk of Depression.
Kimberley Marie Kendall, Elliott Rees, Matthew Bracher-Smith, Sophie Legge, Lucy Riglin, Stanley Zammit, Michael Conlon O'Donovan, Michael John Owen, Ian Jones, George Kirov,[...]. JAMA Psychiatry 2019
24
25

1q21.1 Microduplication expression in adults.
Alessia Dolcetti, Candice K Silversides, Christian R Marshall, Anath C Lionel, Dimitri J Stavropoulos, Stephen W Scherer, Anne S Bassett. Genet Med 2013
58
25

Genotype-phenotype associations in children with copy number variants associated with high neuropsychiatric risk in the UK (IMAGINE-ID): a case-control cohort study.
Samuel J R A Chawner, Michael J Owen, Peter Holmans, F Lucy Raymond, David Skuse, Jeremy Hall, Marianne B M van den Bree. Lancet Psychiatry 2019
32
25

Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects.
Christian R Marshall, Daniel P Howrigan, Daniele Merico, Bhooma Thiruvahindrapuram, Wenting Wu, Douglas S Greer, Danny Antaki, Aniket Shetty, Peter A Holmans, Dalila Pinto,[...]. Nat Genet 2017
398
25

Cognitive Performance Among Carriers of Pathogenic Copy Number Variants: Analysis of 152,000 UK Biobank Subjects.
Kimberley M Kendall, Elliott Rees, Valentina Escott-Price, Mark Einon, Rhys Thomas, Jonathan Hewitt, Michael C O'Donovan, Michael J Owen, James T R Walters, George Kirov. Biol Psychiatry 2017
74
25

Evolution and cell-type specificity of human-specific genes preferentially expressed in progenitors of fetal neocortex.
Marta Florio, Michael Heide, Anneline Pinson, Holger Brandl, Mareike Albert, Sylke Winkler, Pauline Wimberger, Wieland B Huttner, Michael Hiller. Elife 2018
58
25

Large recurrent microdeletions associated with schizophrenia.
Hreinn Stefansson, Dan Rujescu, Sven Cichon, Olli P H Pietiläinen, Andres Ingason, Stacy Steinberg, Ragnheidur Fossdal, Engilbert Sigurdsson, Thordur Sigmundsson, Jacobine E Buizer-Voskamp,[...]. Nature 2008
25

Ways of improving precise knock-in by genome-editing technologies.
Svetlana A Smirnikhina, Arina A Anuchina, Alexander V Lavrov. Hum Genet 2019
9
12

NMRFAM-SPARKY: enhanced software for biomolecular NMR spectroscopy.
Woonghee Lee, Marco Tonelli, John L Markley. Bioinformatics 2015
653
12

The CCPN data model for NMR spectroscopy: development of a software pipeline.
Wim F Vranken, Wayne Boucher, Tim J Stevens, Rasmus H Fogh, Anne Pajon, Miguel Llinas, Eldon L Ulrich, John L Markley, John Ionides, Ernest D Laue. Proteins 2005
12

Application of iterative soft thresholding for fast reconstruction of NMR data non-uniformly sampled with multidimensional Poisson Gap scheduling.
Sven G Hyberts, Alexander G Milbradt, Andreas B Wagner, Haribabu Arthanari, Gerhard Wagner. J Biomol NMR 2012
240
12


NMRPipe: a multidimensional spectral processing system based on UNIX pipes.
F Delaglio, S Grzesiek, G W Vuister, G Zhu, J Pfeifer, A Bax. J Biomol NMR 1995
12

Genome-Wide Structural Variation Detection by Genome Mapping on Nanochannel Arrays.
Angel C Y Mak, Yvonne Y Y Lai, Ernest T Lam, Tsz-Piu Kwok, Alden K Y Leung, Annie Poon, Yulia Mostovoy, Alex R Hastie, William Stedman, Thomas Anantharaman,[...]. Genetics 2016
75
12


Transcription-coupled nucleotide excision repair factors promote R-loop-induced genome instability.
Julie Sollier, Caroline Townsend Stork, María L García-Rubio, Renee D Paulsen, Andrés Aguilera, Karlene A Cimprich. Mol Cell 2014
260
12

Accelerated Profile HMM Searches.
Sean R Eddy. PLoS Comput Biol 2011
12

Fluorescence Methods for Probing G-Quadruplex Structure in Single- and Double-Stranded DNA.
Aaron J Stevens, Hannah L Kennedy, Martin A Kennedy. Biochemistry 2016
8
12

Optimization and troubleshooting in PCR.
Kenneth H Roux. Cold Spring Harb Protoc 2009
31
12

R loops: new modulators of genome dynamics and function.
José M Santos-Pereira, Andrés Aguilera. Nat Rev Genet 2015
357
12

Pfam: the protein families database.
Robert D Finn, Alex Bateman, Jody Clements, Penelope Coggill, Ruth Y Eberhardt, Sean R Eddy, Andreas Heger, Kirstie Hetherington, Liisa Holm, Jaina Mistry,[...]. Nucleic Acids Res 2014
12

The G4 genome.
Nancy Maizels, Lucas T Gray. PLoS Genet 2013
306
12

Mechanisms underlying structural variant formation in genomic disorders.
Claudia M B Carvalho, James R Lupski. Nat Rev Genet 2016
268
12

Lineage-specific gene duplication and loss in human and great ape evolution.
Andrew Fortna, Young Kim, Erik MacLaren, Kriste Marshall, Gretchen Hahn, Lynne Meltesen, Matthew Brenton, Raquel Hink, Sonya Burgers, Tina Hernandez-Boussard,[...]. PLoS Biol 2004
191
12

Genome maps across 26 human populations reveal population-specific patterns of structural variation.
Michal Levy-Sakin, Steven Pastor, Yulia Mostovoy, Le Li, Alden K Y Leung, Jennifer McCaffrey, Eleanor Young, Ernest T Lam, Alex R Hastie, Karen H Y Wong,[...]. Nat Commun 2019
45
12

DNA secondary structures: stability and function of G-quadruplex structures.
Matthew L Bochman, Katrin Paeschke, Virginia A Zakian. Nat Rev Genet 2012
707
12

PRDM9 variation strongly influences recombination hot-spot activity and meiotic instability in humans.
Ingrid L Berg, Rita Neumann, Kwan-Wood G Lam, Shriparna Sarbajna, Linda Odenthal-Hesse, Celia A May, Alec J Jeffreys. Nat Genet 2010
210
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.