A citation-based method for searching scientific literature

Michelle Yam, Abbi L Engel, Yekai Wang, Siyan Zhu, Allison Hauer, Rui Zhang, Daniel Lohner, Jiancheng Huang, Marlee Dinterman, Chen Zhao, Jennifer R Chao, Jianhai Du. J Biol Chem 2019
Times Cited: 36







List of co-cited articles
300 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Biochemical adaptations of the retina and retinal pigment epithelium support a metabolic ecosystem in the vertebrate eye.
Mark A Kanow, Michelle M Giarmarco, Connor Sr Jankowski, Kristine Tsantilas, Abbi L Engel, Jianhai Du, Jonathan D Linton, Christopher C Farnsworth, Stephanie R Sloat, Austin Rountree,[...]. Elife 2017
151
52

Human retinal pigment epithelial cells prefer proline as a nutrient and transport metabolic intermediates to the retinal side.
Jennifer R Chao, Kaitlen Knight, Abbi L Engel, Connor Jankowski, Yekai Wang, Megan A Manson, Haiwei Gu, Danijel Djukovic, Daniel Raftery, James B Hurley,[...]. J Biol Chem 2017
50
38

Glucose, lactate, and shuttling of metabolites in vertebrate retinas.
James B Hurley, Kenneth J Lindsay, Jianhai Du. J Neurosci Res 2015
128
36

Glycolytic reliance promotes anabolism in photoreceptors.
Yashodhan Chinchore, Tedi Begaj, David Wu, Eugene Drokhlyansky, Constance L Cepko. Elife 2017
88
36

Reductive carboxylation is a major metabolic pathway in the retinal pigment epithelium.
Jianhai Du, Aya Yanagida, Kaitlen Knight, Abbi L Engel, Anh Huan Vo, Connor Jankowski, Martin Sadilek, Van Thi Bao Tran, Megan A Manson, Aravind Ramakrishnan,[...]. Proc Natl Acad Sci U S A 2016
57
36

Loss of MPC1 reprograms retinal metabolism to impair visual function.
Allison Grenell, Yekai Wang, Michelle Yam, Aditi Swarup, Tanya L Dilan, Allison Hauer, Jonathan D Linton, Nancy J Philp, Elizabeth Gregor, Siyan Zhu,[...]. Proc Natl Acad Sci U S A 2019
47
36

The retinal pigment epithelium utilizes fatty acids for ketogenesis.
Jeffrey Adijanto, Jianhai Du, Cynthia Moffat, Erin L Seifert, James B Hurle, Nancy J Philp. J Biol Chem 2014
81
33

Phagocytosis-dependent ketogenesis in retinal pigment epithelium.
Juan Reyes-Reveles, Anuradha Dhingra, Desiree Alexander, Alvina Bragin, Nancy J Philp, Kathleen Boesze-Battaglia. J Biol Chem 2017
51
30

Metabolic Deregulation of the Blood-Outer Retinal Barrier in Retinitis Pigmentosa.
Wei Wang, Ashwini Kini, Yekai Wang, Tingting Liu, Yao Chen, Eric Vukmanic, Douglas Emery, Yongqing Liu, Xiaoqin Lu, Lei Jin,[...]. Cell Rep 2019
32
31

Modulating GLUT1 expression in retinal pigment epithelium decreases glucose levels in the retina: impact on photoreceptors and Müller glial cells.
Aditi Swarup, Ivy S Samuels, Brent A Bell, John Y S Han, Jianhai Du, Erik Massenzio, E Dale Abel, Kathleen Boesze-Battaglia, Neal S Peachey, Nancy J Philp. Am J Physiol Cell Physiol 2019
41
27

mTOR-mediated dedifferentiation of the retinal pigment epithelium initiates photoreceptor degeneration in mice.
Chen Zhao, Douglas Yasumura, Xiyan Li, Michael Matthes, Marcia Lloyd, Gregory Nielsen, Kelly Ahern, Michael Snyder, Dean Bok, Joshua L Dunaief,[...]. J Clin Invest 2011
207
25

Probing Metabolism in the Intact Retina Using Stable Isotope Tracers.
Jianhai Du, Jonathan D Linton, James B Hurley. Methods Enzymol 2015
41
25

Hypoxia-induced metabolic stress in retinal pigment epithelial cells is sufficient to induce photoreceptor degeneration.
Toshihide Kurihara, Peter D Westenskow, Marin L Gantner, Yoshihiko Usui, Andrew Schultz, Stephen Bravo, Edith Aguilar, Carli Wittgrove, Mollie Sh Friedlander, Liliana P Paris,[...]. Elife 2016
108
25

ATP consumption by mammalian rod photoreceptors in darkness and in light.
Haruhisa Okawa, Alapakkam P Sampath, Simon B Laughlin, Gordon L Fain. Curr Biol 2008
214
22


Succinate Can Shuttle Reducing Power from the Hypoxic Retina to the O2-Rich Pigment Epithelium.
Celia M Bisbach, Daniel T Hass, Brian M Robbings, Austin M Rountree, Martin Sadilek, Ian R Sweet, James B Hurley. Cell Rep 2020
29
27

Pyruvate kinase and aspartate-glutamate carrier distributions reveal key metabolic links between neurons and glia in retina.
Ken J Lindsay, Jianhai Du, Stephanie R Sloat, Laura Contreras, Jonathan D Linton, Sally J Turner, Martin Sadilek, Jorgina Satrústegui, James B Hurley. Proc Natl Acad Sci U S A 2014
81
19

Cytosolic reducing power preserves glutamate in retina.
Jianhai Du, Whitney Cleghorn, Laura Contreras, Jonathan D Linton, Guy C-K Chan, Andrei O Chertov, Takeyori Saheki, Viren Govindaraju, Martin Sadilek, Jorgina Satrústegui,[...]. Proc Natl Acad Sci U S A 2013
39
19

The cellular and compartmental profile of mouse retinal glycolysis, tricarboxylic acid cycle, oxidative phosphorylation, and ~P transferring kinases.
Elda M Rueda, Jerry E Johnson, Anand Giddabasappa, Anand Swaroop, Matthew J Brooks, Irena Sigel, Shawnta Y Chaney, Donald A Fox. Mol Vis 2016
51
19

Aerobic Glycolysis Is Essential for Normal Rod Function and Controls Secondary Cone Death in Retinitis Pigmentosa.
Lolita Petit, Shan Ma, Joris Cipi, Shun-Yun Cheng, Marina Zieger, Nissim Hay, Claudio Punzo. Cell Rep 2018
50
19

Stimulation of the insulin/mTOR pathway delays cone death in a mouse model of retinitis pigmentosa.
Claudio Punzo, Karl Kornacker, Constance L Cepko. Nat Neurosci 2009
345
16

Phototransduction Influences Metabolic Flux and Nucleotide Metabolism in Mouse Retina.
Jianhai Du, Austin Rountree, Whitney M Cleghorn, Laura Contreras, Ken J Lindsay, Martin Sadilek, Haiwei Gu, Danijel Djukovic, Dan Raftery, Jorgina Satrústegui,[...]. J Biol Chem 2016
58
16

Pyruvate kinase M2 regulates photoreceptor structure, function, and viability.
Ammaji Rajala, Yuhong Wang, Richard S Brush, Kristine Tsantilas, Connor S R Jankowski, Ken J Lindsay, Jonathan D Linton, James B Hurley, Robert E Anderson, Raju V S Rajala. Cell Death Dis 2018
27
22

The retina and retinal pigment epithelium differ in nitrogen metabolism and are metabolically connected.
Rong Xu, Brianna K Ritz, Yekai Wang, Jiancheng Huang, Chen Zhao, Kaizheng Gong, Xinnong Liu, Jianhai Du. J Biol Chem 2020
10
60


Perspective on AMD Pathobiology: A Bioenergetic Crisis in the RPE.
Cody R Fisher, Deborah A Ferrington. Invest Ophthalmol Vis Sci 2018
87
13

IsoCor: correcting MS data in isotope labeling experiments.
Pierre Millard, Fabien Letisse, Serguei Sokol, Jean-Charles Portais. Bioinformatics 2012
185
13

Genome-wide analyses identify common variants associated with macular telangiectasia type 2.
Thomas S Scerri, Anna Quaglieri, Carolyn Cai, Jana Zernant, Nori Matsunami, Lisa Baird, Lea Scheppke, Roberto Bonelli, Lawrence A Yannuzzi, Martin Friedlander,[...]. Nat Genet 2017
65
13


Mitochondrial Defects Drive Degenerative Retinal Diseases.
Deborah A Ferrington, Cody R Fisher, Renu A Kowluru. Trends Mol Med 2020
35
14

Human Plasma Metabolomics in Age-Related Macular Degeneration: Meta-Analysis of Two Cohorts.
Inês Laíns, Wonil Chung, Rachel S Kelly, João Gil, Marco Marques, Patrícia Barreto, Joaquim N Murta, Ivana K Kim, Demetrios G Vavvas, John B Miller,[...]. Metabolites 2019
20
25

Serine and Lipid Metabolism in Macular Disease and Peripheral Neuropathy.
Marin L Gantner, Kevin Eade, Martina Wallace, Michal K Handzlik, Regis Fallon, Jennifer Trombley, Roberto Bonelli, Sarah Giles, Sarah Harkins-Perry, Tjebo F C Heeren,[...]. N Engl J Med 2019
84
13

Sphingolipids as Emerging Mediators in Retina Degeneration.
M Victoria Simón, Facundo H Prado Spalm, Marcela S Vera, Nora P Rotstein. Front Cell Neurosci 2019
35
14



Cancer-like metabolism of the mammalian retina.
Soo Khai Ng, John P M Wood, Glyn Chidlow, Guoge Han, Thaksaon Kittipassorn, Daniel J Peet, Robert J Casson. Clin Exp Ophthalmol 2015
59
13

Photoreceptor metabolic reprogramming provides survival advantage in acute stress while causing chronic degeneration.
Thomas J Wubben, Mercy Pawar, Andrew Smith, Kevin Toolan, Heather Hager, Cagri G Besirli. Sci Rep 2017
25
20

Metabolic signature of the aging eye in mice.
Yekai Wang, Allison Grenell, Fanyi Zhong, Michelle Yam, Allison Hauer, Elizabeth Gregor, Siyan Zhu, Daniel Lohner, Jiangjiang Zhu, Jianhai Du. Neurobiol Aging 2018
32
15

Altered bioenergetics and enhanced resistance to oxidative stress in human retinal pigment epithelial cells from donors with age-related macular degeneration.
Deborah A Ferrington, Mara C Ebeling, Rebecca J Kapphahn, Marcia R Terluk, Cody R Fisher, Jorge R Polanco, Heidi Roehrich, Michaela M Leary, Zhaohui Geng, James R Dutton,[...]. Redox Biol 2017
83
13

On the origin of cancer cells.
O WARBURG. Science 1956
13


Role of monocarboxylate transporters in regulating metabolic homeostasis in the outer retina: Insight gained from cell-specific Bsg deletion.
John Y S Han, Junzo Kinoshita, Sara Bisetto, Brent A Bell, Romana A Nowak, Neal S Peachey, Nancy J Philp. FASEB J 2020
12
41

Loss of synchronized retinal phagocytosis and age-related blindness in mice lacking alphavbeta5 integrin.
Emeline F Nandrot, Yoonhee Kim, Scott E Brodie, Xiaozhu Huang, Dean Sheppard, Silvia C Finnemann. J Exp Med 2004
236
11

Mutations in NMNAT1 cause Leber congenital amaurosis and identify a new disease pathway for retinal degeneration.
Robert K Koenekoop, Hui Wang, Jacek Majewski, Xia Wang, Irma Lopez, Huanan Ren, Yiyun Chen, Yumei Li, Gerald A Fishman, Mohammed Genead,[...]. Nat Genet 2012
133
11

Mitochondrial oxidative stress in the retinal pigment epithelium (RPE) led to metabolic dysfunction in both the RPE and retinal photoreceptors.
Emily E Brown, Alexander J DeWeerd, Cristhian J Ildefonso, Alfred S Lewin, John D Ash. Redox Biol 2019
79
11

Reprogramming towards anabolism impedes degeneration in a preclinical model of retinitis pigmentosa.
Lijuan Zhang, Sally Justus, Yu Xu, Tamara Pluchenik, Chun-Wei Hsu, Jin Yang, Jimmy K Duong, Chyuan-Sheng Lin, Yading Jia, Alexander G Bassuk,[...]. Hum Mol Genet 2016
23
17

Metabolome-wide association study of neovascular age-related macular degeneration.
Melissa P Osborn, Youngja Park, Megan B Parks, L Goodwin Burgess, Karan Uppal, Kichun Lee, Dean P Jones, Milam A Brantley. PLoS One 2013
81
11

The Carnitine Shuttle Pathway is Altered in Patients With Neovascular Age-Related Macular Degeneration.
Sabrina L Mitchell, Karan Uppal, Samantha M Williamson, Ken Liu, L Goodwin Burgess, ViLinh Tran, Allison C Umfress, Kelli L Jarrell, Jessica N Cooke Bailey, Anita Agarwal,[...]. Invest Ophthalmol Vis Sci 2018
23
17

Human plasma metabolomics in age-related macular degeneration (AMD) using nuclear magnetic resonance spectroscopy.
Inês Laíns, Daniela Duarte, António S Barros, Ana Sofia Martins, João Gil, John B Miller, Marco Marques, Tânia Mesquita, Ivana K Kim, Maria da Luz Cachulo,[...]. PLoS One 2017
37
11

Human Plasma Metabolomics Study across All Stages of Age-Related Macular Degeneration Identifies Potential Lipid Biomarkers.
Inês Laíns, Rachel S Kelly, John B Miller, Rufino Silva, Demetrios G Vavvas, Ivana K Kim, Joaquim N Murta, Jessica Lasky-Su, Joan W Miller, Deeba Husain. Ophthalmology 2018
50
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.