A citation-based method for searching scientific literature

Mykhailo Kopylov, Trevia M Jackson, M Elizabeth Stroupe. Molecules 2019
Times Cited: 3







List of co-cited articles
2 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


I-motif DNA structures are formed in the nuclei of human cells.
Mahdi Zeraati, David B Langley, Peter Schofield, Aaron L Moye, Romain Rouet, William E Hughes, Tracy M Bryan, Marcel E Dinger, Daniel Christ. Nat Chem 2018
252
66

Whole genome experimental maps of DNA G-quadruplexes in multiple species.
Giovanni Marsico, Vicki S Chambers, Aleksandr B Sahakyan, Patrick McCauley, Jonathan M Boutell, Marco Di Antonio, Shankar Balasubramanian. Nucleic Acids Res 2019
154
66

Fine-tuning the properties of the thrombin binding aptamer through cyclization: Effect of the 5'-3' connecting linker on the aptamer stability and anticoagulant activity.
Claudia Riccardi, Albert Meyer, Jean-Jacques Vasseur, Irene Russo Krauss, Luigi Paduano, François Morvan, Daniela Montesarchio. Bioorg Chem 2020
17
33


Thermodynamic, Anticoagulant, and Antiproliferative Properties of Thrombin Binding Aptamer Containing Novel UNA Derivative.
Weronika Kotkowiak, Jolanta Lisowiec-Wachnicka, Jakub Grynda, Ryszard Kierzek, Jesper Wengel, Anna Pasternak. Mol Ther Nucleic Acids 2018
34
33

Non canonical genetic material.
Elena Eremeeva, Piet Herdewijn. Curr Opin Biotechnol 2019
23
33

Improved RE31 Analogues Containing Modified Nucleic Acid Monomers: Thermodynamic, Structural, and Biological Effects.
Weronika Kotkowiak, Jesper Wengel, Chris J Scotton, Anna Pasternak. J Med Chem 2019
15
33

Hexitol nucleic acid-containing aptamers are efficient ligands of HIV-1 TAR RNA.
Gaëlle Kolb, Sandrine Reigadas, Claudine Boiziau, Arthur van Aerschot, Andrey Arzumanov, Michael J Gait, Piet Herdewijn, Jean-Jacques Toulmé. Biochemistry 2005
28
33

Synthesis and base pairing properties of 1',5'-anhydro-L-hexitol nucleic acids (L-HNA).
Daniele D'Alonzo, Arthur Van Aerschot, Annalisa Guaragna, Giovanni Palumbo, Guy Schepers, Stefania Capone, Jef Rozenski, Piet Herdewijn. Chemistry 2009
19
33


Highly stable hexitol based XNA aptamers targeting the vascular endothelial growth factor.
Elena Eremeeva, Antonios Fikatas, Lia Margamuljana, Mikhail Abramov, Dominique Schols, Elisabetta Groaz, Piet Herdewijn. Nucleic Acids Res 2019
45
33

Thrombin.
Enrico Di Cera. Mol Aspects Med 2008
211
33

Aptamers as targeted therapeutics: current potential and challenges.
Jiehua Zhou, John Rossi. Nat Rev Drug Discov 2017
785
33

A novel method of screening thrombin-inhibiting DNA aptamers using an evolution-mimicking algorithm.
Kazunori Ikebukuro, Yuji Okumura, Koichi Sumikura, Isao Karube. Nucleic Acids Res 2005
69
33

G-quadruplex-based fluorescent assay of S1 nuclease activity and K+.
Zhixue Zhou, Jinbo Zhu, Libing Zhang, Yan Du, Shaojun Dong, Erkang Wang. Anal Chem 2013
32
33

Molecular mechanisms of thrombin function.
E Di Cera, Q D Dang, Y M Ayala. Cell Mol Life Sci 1997
145
33

Enantiomeric selection properties of β-homoDNA: enhanced pairing for heterochiral complexes.
Daniele D'Alonzo, Jussara Amato, Guy Schepers, Matheus Froeyen, Arthur Van Aerschot, Piet Herdewijn, Annalisa Guaragna. Angew Chem Int Ed Engl 2013
12
33

Coexistence of G-quadruplex and duplex domains within the secondary structure of 31-mer DNA thrombin-binding aptamer.
N G Dolinnaya, A V Yuminova, V A Spiridonova, A M Arutyunyan, A M Kopylov. J Biomol Struct Dyn 2012
23
33

Selection of single-stranded DNA molecules that bind and inhibit human thrombin.
L C Bock, L C Griffin, J A Latham, E H Vermaas, J J Toole. Nature 1992
33

Aptamers as therapeutics.
Anthony D Keefe, Supriya Pai, Andrew Ellington. Nat Rev Drug Discov 2010
33

Toward L-homo-DNA: stereoselective de novo synthesis of β-L-erythro-hexopyranosyl nucleosides.
Daniele D'Alonzo, Annalisa Guaragna, Arthur Van Aerschot, Piet Herdewijn, Giovanni Palumbo. J Org Chem 2010
16
33

Duplex/quadruplex oligonucleotides: Role of the duplex domain in the stabilization of a new generation of highly effective anti-thrombin aptamers.
Irene Russo Krauss, Valeria Napolitano, Luigi Petraccone, Romualdo Troisi, Vera Spiridonova, Carlo Andrea Mattia, Filomena Sica. Int J Biol Macromol 2018
25
33

Several structural motifs cooperate in determining the highly effective anti-thrombin activity of NU172 aptamer.
Romualdo Troisi, Valeria Napolitano, Vera Spiridonova, Irene Russo Krauss, Filomena Sica. Nucleic Acids Res 2018
30
33


Effects of six-membered carbohydrate rings on structure, stability, and kinetics of G-quadruplexes.
Jun Zhou, Michael Abramov, Fengwu Liu, Samir Amrane, Anne Bourdoncle, Piet Herdewijn, Jean-Louis Mergny. Chemistry 2013
5
33

RNA aptamers as reversible antagonists of coagulation factor IXa.
Christopher P Rusconi, Elizabeth Scardino, Juliana Layzer, George A Pitoc, Thomas L Ortel, Dougald Monroe, Bruce A Sullenger. Nature 2002
375
33


General mechanisms of coagulation and targets of anticoagulants (Section I). Position Paper of the ESC Working Group on Thrombosis--Task Force on Anticoagulants in Heart Disease.
Raffaele De Caterina, Steen Husted, Lars Wallentin, Felicita Andreotti, Harald Arnesen, Fedor Bachmann, Colin Baigent, Kurt Huber, Jørgen Jespersen, Steen Dalby Kristensen,[...]. Thromb Haemost 2013
132
33

Aptamer RA36 inhibits of human, rabbit, and rat plasma coagulation activated with thrombin or snake venom coagulases.
E Yu Savchik, T B Kalinina, N N Drozd, V A Makarov, E G Zav'yalova, E N Lapsheva, N N Mudrik, A V Babij, G V Pavlova, A V Golovin,[...]. Bull Exp Biol Med 2013
9
33

Aptamers as Therapeutics.
Shahid M Nimjee, Rebekah R White, Richard C Becker, Bruce A Sullenger. Annu Rev Pharmacol Toxicol 2017
230
33

A structure-activity relationship of a thrombin-binding aptamer containing LNA in novel sites.
GuoQing Ying, XingRu Lu, JianFeng Mei, YanLu Zhang, JianShu Chen, XuDong Wang, ZhiMing Ou, Yu Yi. Bioorg Med Chem 2019
13
33

Thrombin binding aptamer G-quadruplex stabilized by pyrene-modified nucleotides.
Matic Kovačič, Peter Podbevšek, Hisae Tateishi-Karimata, Shuntaro Takahashi, Naoki Sugimoto, Janez Plavec. Nucleic Acids Res 2020
20
33

Different duplex/quadruplex junctions determine the properties of anti-thrombin aptamers with mixed folding.
Irene Russo Krauss, Vera Spiridonova, Andrea Pica, Valeria Napolitano, Filomena Sica. Nucleic Acids Res 2016
42
33


Oligonucleotide inhibitors of human thrombin that bind distinct epitopes.
D M Tasset, M F Kubik, W Steiner. J Mol Biol 1997
566
33

Therapeutic aptamers in discovery, preclinical and clinical stages.
Said I Ismail, Walhan Alshaer. Adv Drug Deliv Rev 2018
26
33

Exploring the role of chirality in nucleic acid recognition.
Daniele D'Alonzo, Annalisa Guaragna, Giovanni Palumbo. Chem Biodivers 2011
25
33

Following G-quartet formation by UV-spectroscopy.
J L Mergny, A T Phan, L Lacroix. FEBS Lett 1998
544
33

Rapidly Neutralizable and Highly Anticoagulant Thrombin-Binding DNA Aptamer Discovered by MACE SELEX.
Koji Wakui, Toru Yoshitomi, Akane Yamaguchi, Maho Tsuchida, Shingo Saito, Masami Shibukawa, Hitoshi Furusho, Keitaro Yoshimoto. Mol Ther Nucleic Acids 2019
33
33

Oligonucleotides containing a ribo-configured cyclohexanyl nucleoside: probing the role of sugar conformation in base pairing selectivity.
Concetta Paolella, Daniele D'Alonzo, Guy Schepers, Arthur Van Aerschot, Giovanni Di Fabio, Giovanni Palumbo, Piet Herdewijn, Annalisa Guaragna. Org Biomol Chem 2015
3
33


Thrombin-binding DNA aptamer forms a unimolecular quadruplex structure in solution.
R F Macaya, P Schultze, F W Smith, J A Roe, J Feigon. Proc Natl Acad Sci U S A 1993
680
33

Phenomenological analysis of the clotting curve.
R De Cristofaro, E Di Cera. J Protein Chem 1991
32
33

Effect of loop sequence and size on DNA aptamer stability.
I Smirnov, R H Shafer. Biochemistry 2000
233
33

Probing the Nitroindole-Modified Central Loop of Thrombin Aptamer HD1 as a Recognition Site.
Natalia A Kolganova, Vladimir B Tsvetkov, Igor P Smirnov, Edward N Timofeev. Nucleic Acid Ther 2019
3
33

Synthetic genetic polymers capable of heredity and evolution.
Vitor B Pinheiro, Alexander I Taylor, Christopher Cozens, Mikhail Abramov, Marleen Renders, Su Zhang, John C Chaput, Jesper Wengel, Sew-Yeu Peak-Chew, Stephen H McLaughlin,[...]. Science 2012
405
33

A novel oligodeoxynucleotide inhibitor of thrombin. II. Pharmacokinetics in the cynomolgus monkey.
W A Lee, J A Fishback, J P Shaw, L C Bock, L C Griffin, K C Cundy. Pharm Res 1995
17
33

Investigating the role of T7 and T12 residues on the biological properties of thrombin-binding aptamer: enhancement of anticoagulant activity by a single nucleobase modification.
Nicola Borbone, Mariarosaria Bucci, Giorgia Oliviero, Elena Morelli, Jussara Amato, Valentina D'Atri, Stefano D'Errico, Valentina Vellecco, Giuseppe Cirino, Gennaro Piccialli,[...]. J Med Chem 2012
39
33

Improved thrombin binding aptamer by incorporation of a single unlocked nucleic acid monomer.
Anna Pasternak, Frank J Hernandez, Lars M Rasmussen, Birte Vester, Jesper Wengel. Nucleic Acids Res 2011
125
33

Inhibition of MDR1 gene expression by chimeric HNA antisense oligonucleotides.
Hyunmin Kang, Michael H Fisher, Dong Xu, Yuko J Miyamoto, Arnaud Marchand, Arthur Van Aerschot, Piet Herdewijn, Rudolph L Juliano. Nucleic Acids Res 2004
37
33


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.