A citation-based method for searching scientific literature

Genevieve L Wojcik, Mariaelisa Graff, Katherine K Nishimura, Ran Tao, Jeffrey Haessler, Christopher R Gignoux, Heather M Highland, Yesha M Patel, Elena P Sorokin, Christy L Avery, Gillian M Belbin, Stephanie A Bien, Iona Cheng, Sinead Cullina, Chani J Hodonsky, Yao Hu, Laura M Huckins, Janina Jeff, Anne E Justice, Jonathan M Kocarnik, Unhee Lim, Bridget M Lin, Yingchang Lu, Sarah C Nelson, Sung-Shim L Park, Hannah Poisner, Michael H Preuss, Melissa A Richard, Claudia Schurmann, Veronica W Setiawan, Alexandra Sockell, Karan Vahi, Marie Verbanck, Abhishek Vishnu, Ryan W Walker, Kristin L Young, Niha Zubair, Victor Acuña-Alonso, Jose Luis Ambite, Kathleen C Barnes, Eric Boerwinkle, Erwin P Bottinger, Carlos D Bustamante, Christian Caberto, Samuel Canizales-Quinteros, Matthew P Conomos, Ewa Deelman, Ron Do, Kimberly Doheny, Lindsay Fernández-Rhodes, Myriam Fornage, Benyam Hailu, Gerardo Heiss, Brenna M Henn, Lucia A Hindorff, Rebecca D Jackson, Cecelia A Laurie, Cathy C Laurie, Yuqing Li, Dan-Yu Lin, Andres Moreno-Estrada, Girish Nadkarni, Paul J Norman, Loreall C Pooler, Alexander P Reiner, Jane Romm, Chiara Sabatti, Karla Sandoval, Xin Sheng, Eli A Stahl, Daniel O Stram, Timothy A Thornton, Christina L Wassel, Lynne R Wilkens, Cheryl A Winkler, Sachi Yoneyama, Steven Buyske, Christopher A Haiman, Charles Kooperberg, Loic Le Marchand, Ruth J F Loos, Tara C Matise, Kari E North, Ulrike Peters, Eimear E Kenny, Christopher S Carlson. Nature 2019
Times Cited: 263







List of co-cited articles
683 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Clinical use of current polygenic risk scores may exacerbate health disparities.
Alicia R Martin, Masahiro Kanai, Yoichiro Kamatani, Yukinori Okada, Benjamin M Neale, Mark J Daly. Nat Genet 2019
610
28

A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
22

Second-generation PLINK: rising to the challenge of larger and richer datasets.
Christopher C Chang, Carson C Chow, Laurent Cam Tellier, Shashaank Vattikuti, Shaun M Purcell, James J Lee. Gigascience 2015
19

Genomics is failing on diversity.
Alice B Popejoy, Stephanie M Fullerton. Nature 2016
652
17

Human Demographic History Impacts Genetic Risk Prediction across Diverse Populations.
Alicia R Martin, Christopher R Gignoux, Raymond K Walters, Genevieve L Wojcik, Benjamin M Neale, Simon Gravel, Mark J Daly, Carlos D Bustamante, Eimear E Kenny. Am J Hum Genet 2017
507
17

Analysis of polygenic risk score usage and performance in diverse human populations.
L Duncan, H Shen, B Gelaye, J Meijsen, K Ressler, M Feldman, R Peterson, B Domingue. Nat Commun 2019
265
17

PLINK: a tool set for whole-genome association and population-based linkage analyses.
Shaun Purcell, Benjamin Neale, Kathe Todd-Brown, Lori Thomas, Manuel A R Ferreira, David Bender, Julian Maller, Pamela Sklar, Paul I W de Bakker, Mark J Daly,[...]. Am J Hum Genet 2007
16

The UK Biobank resource with deep phenotyping and genomic data.
Clare Bycroft, Colin Freeman, Desislava Petkova, Gavin Band, Lloyd T Elliott, Kevin Sharp, Allan Motyer, Damjan Vukcevic, Olivier Delaneau, Jared O'Connell,[...]. Nature 2018
16

10 Years of GWAS Discovery: Biology, Function, and Translation.
Peter M Visscher, Naomi R Wray, Qian Zhang, Pamela Sklar, Mark I McCarthy, Matthew A Brown, Jian Yang. Am J Hum Genet 2017
13

The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019.
Annalisa Buniello, Jacqueline A L MacArthur, Maria Cerezo, Laura W Harris, James Hayhurst, Cinzia Malangone, Aoife McMahon, Joannella Morales, Edward Mountjoy, Elliot Sollis,[...]. Nucleic Acids Res 2019
13

LD Score regression distinguishes confounding from polygenicity in genome-wide association studies.
Brendan K Bulik-Sullivan, Po-Ru Loh, Hilary K Finucane, Stephan Ripke, Jian Yang, Nick Patterson, Mark J Daly, Alkes L Price, Benjamin M Neale. Nat Genet 2015
13

Genome-wide Association Studies in Ancestrally Diverse Populations: Opportunities, Methods, Pitfalls, and Recommendations.
Roseann E Peterson, Karoline Kuchenbaecker, Raymond K Walters, Chia-Yen Chen, Alice B Popejoy, Sathish Periyasamy, Max Lam, Conrad Iyegbe, Rona J Strawbridge, Leslie Brick,[...]. Cell 2019
132
13

Principal components analysis corrects for stratification in genome-wide association studies.
Alkes L Price, Nick J Patterson, Robert M Plenge, Michael E Weinblatt, Nancy A Shadick, David Reich. Nat Genet 2006
12

Genome-wide polygenic scores for common diseases identify individuals with risk equivalent to monogenic mutations.
Amit V Khera, Mark Chaffin, Krishna G Aragam, Mary E Haas, Carolina Roselli, Seung Hoan Choi, Pradeep Natarajan, Eric S Lander, Steven A Lubitz, Patrick T Ellinor,[...]. Nat Genet 2018
990
12

Modeling Linkage Disequilibrium Increases Accuracy of Polygenic Risk Scores.
Bjarni J Vilhjálmsson, Jian Yang, Hilary K Finucane, Alexander Gusev, Sara Lindström, Stephan Ripke, Giulio Genovese, Po-Ru Loh, Gaurav Bhatia, Ron Do,[...]. Am J Hum Genet 2015
526
11

Genomics of disease risk in globally diverse populations.
Deepti Gurdasani, Inês Barroso, Eleftheria Zeggini, Manjinder S Sandhu. Nat Rev Genet 2019
92
11

Genetics of blood lipids among ~300,000 multi-ethnic participants of the Million Veteran Program.
Derek Klarin, Scott M Damrauer, Kelly Cho, Yan V Sun, Tanya M Teslovich, Jacqueline Honerlaw, David R Gagnon, Scott L DuVall, Jin Li, Gina M Peloso,[...]. Nat Genet 2018
254
10

A large electronic-health-record-based genome-wide study of serum lipids.
Thomas J Hoffmann, Elizabeth Theusch, Tanushree Haldar, Dilrini K Ranatunga, Eric Jorgenson, Marisa W Medina, Mark N Kvale, Pui-Yan Kwok, Catherine Schaefer, Ronald M Krauss,[...]. Nat Genet 2018
124
10

Polygenic scores via penalized regression on summary statistics.
Timothy Shin Heng Mak, Robert Milan Porsch, Shing Wan Choi, Xueya Zhou, Pak Chung Sham. Genet Epidemiol 2017
91
10

Uganda Genome Resource Enables Insights into Population History and Genomic Discovery in Africa.
Deepti Gurdasani, Tommy Carstensen, Segun Fatumo, Guanjie Chen, Chris S Franklin, Javier Prado-Martinez, Heleen Bouman, Federico Abascal, Marc Haber, Ioanna Tachmazidou,[...]. Cell 2019
64
15

Fast model-based estimation of ancestry in unrelated individuals.
David H Alexander, John Novembre, Kenneth Lange. Genome Res 2009
9

Discovery and refinement of loci associated with lipid levels.
Cristen J Willer, Ellen M Schmidt, Sebanti Sengupta, Gina M Peloso, Stefan Gustafsson, Stavroula Kanoni, Andrea Ganna, Jin Chen, Martin L Buchkovich, Samia Mora,[...]. Nat Genet 2013
9

METAL: fast and efficient meta-analysis of genomewide association scans.
Cristen J Willer, Yun Li, Gonçalo R Abecasis. Bioinformatics 2010
9

Multiethnic polygenic risk scores improve risk prediction in diverse populations.
Carla Márquez-Luna, Po-Ru Loh, Alkes L Price. Genet Epidemiol 2017
105
9

Insights into human genetic variation and population history from 929 diverse genomes.
Anders Bergström, Shane A McCarthy, Ruoyun Hui, Mohamed A Almarri, Qasim Ayub, Petr Danecek, Yuan Chen, Sabine Felkel, Pille Hallast, Jack Kamm,[...]. Science 2020
148
8

The Missing Diversity in Human Genetic Studies.
Giorgio Sirugo, Scott M Williams, Sarah A Tishkoff. Cell 2019
293
8

Next-generation genotype imputation service and methods.
Sayantan Das, Lukas Forer, Sebastian Schönherr, Carlo Sidore, Adam E Locke, Alan Kwong, Scott I Vrieze, Emily Y Chew, Shawn Levy, Matt McGue,[...]. Nat Genet 2016
8

RFMix: a discriminative modeling approach for rapid and robust local-ancestry inference.
Brian K Maples, Simon Gravel, Eimear E Kenny, Carlos D Bustamante. Am J Hum Genet 2013
322
8

The new NHGRI-EBI Catalog of published genome-wide association studies (GWAS Catalog).
Jacqueline MacArthur, Emily Bowler, Maria Cerezo, Laurent Gil, Peggy Hall, Emma Hastings, Heather Junkins, Aoife McMahon, Annalisa Milano, Joannella Morales,[...]. Nucleic Acids Res 2017
8

Comparative genetic architectures of schizophrenia in East Asian and European populations.
Max Lam, Chia-Yen Chen, Zhiqiang Li, Alicia R Martin, Julien Bryois, Xixian Ma, Helena Gaspar, Masashi Ikeda, Beben Benyamin, Brielin C Brown,[...]. Nat Genet 2019
168
8

GCTA: a tool for genome-wide complex trait analysis.
Jian Yang, S Hong Lee, Michael E Goddard, Peter M Visscher. Am J Hum Genet 2011
7

Leveraging Polygenic Functional Enrichment to Improve GWAS Power.
Gleb Kichaev, Gaurav Bhatia, Po-Ru Loh, Steven Gazal, Kathryn Burch, Malika K Freund, Armin Schoech, Bogdan Pasaniuc, Alkes L Price. Am J Hum Genet 2019
317
7

A comprehensive 1,000 Genomes-based genome-wide association meta-analysis of coronary artery disease.
Majid Nikpay, Anuj Goel, Hong-Hee Won, Leanne M Hall, Christina Willenborg, Stavroula Kanoni, Danish Saleheen, Theodosios Kyriakou, Christopher P Nelson, Jemma C Hopewell,[...]. Nat Genet 2015
7

Reduced signal for polygenic adaptation of height in UK Biobank.
Jeremy J Berg, Arbel Harpak, Nasa Sinnott-Armstrong, Anja Moltke Joergensen, Hakhamanesh Mostafavi, Yair Field, Evan August Boyle, Xinjun Zhang, Fernando Racimo, Jonathan K Pritchard,[...]. Elife 2019
142
7

The personal and clinical utility of polygenic risk scores.
Ali Torkamani, Nathan E Wineinger, Eric J Topol. Nat Rev Genet 2018
512
7

Developing and evaluating polygenic risk prediction models for stratified disease prevention.
Nilanjan Chatterjee, Jianxin Shi, Montserrat García-Closas. Nat Rev Genet 2016
323
7

Bayesian test for colocalisation between pairs of genetic association studies using summary statistics.
Claudia Giambartolomei, Damjan Vukcevic, Eric E Schadt, Lude Franke, Aroon D Hingorani, Chris Wallace, Vincent Plagnol. PLoS Genet 2014
747
7

Integrative approaches for large-scale transcriptome-wide association studies.
Alexander Gusev, Arthur Ko, Huwenbo Shi, Gaurav Bhatia, Wonil Chung, Brenda W J H Penninx, Rick Jansen, Eco J C de Geus, Dorret I Boomsma, Fred A Wright,[...]. Nat Genet 2016
708
7

A gene-based association method for mapping traits using reference transcriptome data.
Eric R Gamazon, Heather E Wheeler, Kaanan P Shah, Sahar V Mozaffari, Keston Aquino-Michaels, Robert J Carroll, Anne E Eyler, Joshua C Denny, Dan L Nicolae, Nancy J Cox,[...]. Nat Genet 2015
705
7

Use of >100,000 NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium whole genome sequences improves imputation quality and detection of rare variant associations in admixed African and Hispanic/Latino populations.
Madeline H Kowalski, Huijun Qian, Ziyi Hou, Jonathan D Rosen, Amanda L Tapia, Yue Shan, Deepti Jain, Maria Argos, Donna K Arnett, Christy Avery,[...]. PLoS Genet 2019
87
6

Polygenic prediction via Bayesian regression and continuous shrinkage priors.
Tian Ge, Chia-Yen Chen, Yang Ni, Yen-Chen Anne Feng, Jordan W Smoller. Nat Commun 2019
166
6

The mutational constraint spectrum quantified from variation in 141,456 humans.
Konrad J Karczewski, Laurent C Francioli, Grace Tiao, Beryl B Cummings, Jessica Alföldi, Qingbo Wang, Ryan L Collins, Kristen M Laricchia, Andrea Ganna, Daniel P Birnbaum,[...]. Nature 2020
6

Genetic association testing using the GENESIS R/Bioconductor package.
Stephanie M Gogarten, Tamar Sofer, Han Chen, Chaoyu Yu, Jennifer A Brody, Timothy A Thornton, Kenneth M Rice, Matthew P Conomos. Bioinformatics 2019
74
8

Integrating common and rare genetic variation in diverse human populations.
David M Altshuler, Richard A Gibbs, Leena Peltonen, David M Altshuler, Richard A Gibbs, Leena Peltonen, Emmanouil Dermitzakis, Stephen F Schaffner, Fuli Yu, Leena Peltonen,[...]. Nature 2010
6

The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease.
William J Astle, Heather Elding, Tao Jiang, Dave Allen, Dace Ruklisa, Alice L Mann, Daniel Mead, Heleen Bouman, Fernando Riveros-Mckay, Myrto A Kostadima,[...]. Cell 2016
548
6

The UK10K project identifies rare variants in health and disease.
Klaudia Walter, Josine L Min, Jie Huang, Lucy Crooks, Yasin Memari, Shane McCarthy, John R B Perry, ChangJiang Xu, Marta Futema, Daniel Lawson,[...]. Nature 2015
591
6

The Missing Diversity in Human Genetic Studies.
Giorgio Sirugo, Scott M Williams, Sarah A Tishkoff. Cell 2019
65
9

An Expanded View of Complex Traits: From Polygenic to Omnigenic.
Evan A Boyle, Yang I Li, Jonathan K Pritchard. Cell 2017
6

From genome-wide associations to candidate causal variants by statistical fine-mapping.
Daniel J Schaid, Wenan Chen, Nicholas B Larson. Nat Rev Genet 2018
246
6

Genetic analysis of quantitative traits in the Japanese population links cell types to complex human diseases.
Masahiro Kanai, Masato Akiyama, Atsushi Takahashi, Nana Matoba, Yukihide Momozawa, Masashi Ikeda, Nakao Iwata, Shiro Ikegawa, Makoto Hirata, Koichi Matsuda,[...]. Nat Genet 2018
284
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.