A citation-based method for searching scientific literature


List of co-cited articles
19 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Identification of early replicating fragile sites that contribute to genome instability.
Jacqueline H Barlow, Robert B Faryabi, Elsa Callén, Nancy Wong, Amy Malhowski, Hua Tang Chen, Gustavo Gutierrez-Cruz, Hong-Wei Sun, Peter McKinnon, George Wright,[...]. Cell 2013
257
100

The Fanconi Anemia Pathway Protects Genome Integrity from R-loops.
María L García-Rubio, Carmen Pérez-Calero, Sonia I Barroso, Emanuela Tumini, Emilia Herrera-Moyano, Iván V Rosado, Andrés Aguilera. PLoS Genet 2015
160
50

R-Loops as Cellular Regulators and Genomic Threats.
Madzia P Crossley, Michael Bocek, Karlene A Cimprich. Mol Cell 2019
194
50

Post-licensing Specification of Eukaryotic Replication Origins by Facilitated Mcm2-7 Sliding along DNA.
Julien Gros, Charanya Kumar, Gerard Lynch, Tejas Yadav, Iestyn Whitehouse, Dirk Remus. Mol Cell 2015
60
50

Transcription shapes DNA replication initiation and termination in human cells.
Yu-Hung Chen, Sarah Keegan, Malik Kahli, Peter Tonzi, David Fenyö, Tony T Huang, Duncan J Smith. Nat Struct Mol Biol 2019
44
50

Prevalent, Dynamic, and Conserved R-Loop Structures Associate with Specific Epigenomic Signatures in Mammals.
Lionel A Sanz, Stella R Hartono, Yoong Wearn Lim, Sandra Steyaert, Aparna Rajpurkar, Paul A Ginno, Xiaoqin Xu, Frédéric Chédin. Mol Cell 2016
230
50


The pINDUCER lentiviral toolkit for inducible RNA interference in vitro and in vivo.
Kristen L Meerbrey, Guang Hu, Jessica D Kessler, Kevin Roarty, Mamie Z Li, Justin E Fang, Jason I Herschkowitz, Anna E Burrows, Alberto Ciccia, Tingting Sun,[...]. Proc Natl Acad Sci U S A 2011
401
50



Parvovirus minute virus of mice interacts with sites of cellular DNA damage to establish and amplify its lytic infection.
Kinjal Majumder, Juexin Wang, Maria Boftsi, Matthew S Fuller, Jordan E Rede, Trupti Joshi, David J Pintel. Elife 2018
12
50

epic2 efficiently finds diffuse domains in ChIP-seq data.
Endre Bakken Stovner, Pål Sætrom. Bioinformatics 2019
24
50

Parvovirus minute virus of mice induces a DNA damage response that facilitates viral replication.
Richard O Adeyemi, Sebastien Landry, Meredith E Davis, Matthew D Weitzman, David J Pintel. PLoS Pathog 2010
61
50



Fast gapped-read alignment with Bowtie 2.
Ben Langmead, Steven L Salzberg. Nat Methods 2012
50

A clustering approach for identification of enriched domains from histone modification ChIP-Seq data.
Chongzhi Zang, Dustin E Schones, Chen Zeng, Kairong Cui, Keji Zhao, Weiqun Peng. Bioinformatics 2009
647
50

The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
50

Replication Stress Shapes a Protective Chromatin Environment across Fragile Genomic Regions.
Jeongkyu Kim, David Sturgill, Robin Sebastian, Simran Khurana, Andy D Tran, Garrett B Edwards, Alex Kruswick, Sandra Burkett, Eri K Hosogane, William W Hannon,[...]. Mol Cell 2018
44
50

A journey with common fragile sites: From S phase to telophase.
Michelle Debatisse, Filippo Rosselli. Genes Chromosomes Cancer 2019
22
25

Chromosome Bandings.
Huifang Huang, Jiadi Chen. Methods Mol Biol 2017
6
25

Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.
David Pladevall-Morera, Stephanie Munk, Andreas Ingham, Lorenza Garribba, Eliene Albers, Ying Liu, Jesper V Olsen, Andres J Lopez-Contreras. Nucleic Acids Res 2019
12
25

The impact of replication stress on replication dynamics and DNA damage in vertebrate cells.
Hervé Técher, Stéphane Koundrioukoff, Alain Nicolas, Michelle Debatisse. Nat Rev Genet 2017
119
25

Global screening and extended nomenclature for 230 aphidicolin-inducible fragile sites, including 61 yet unreported ones.
Kristin Mrasek, Christiane Schoder, Anne-Christin Teichmann, Katja Behr, Britta Franze, Kathleen Wilhelm, Nancy Blaurock, Uwe Claussen, Thomas Liehr, Anja Weise. Int J Oncol 2010
86
25

R loops: new modulators of genome dynamics and function.
José M Santos-Pereira, Andrés Aguilera. Nat Rev Genet 2015
376
25

The role of fork stalling and DNA structures in causing chromosome fragility.
Simran Kaushal, Catherine H Freudenreich. Genes Chromosomes Cancer 2019
31
25



Large common fragile site genes and cancer.
David I Smith, Sarah McAvoy, Yu Zhu, Damon S Perez. Semin Cancer Biol 2007
83
25

A genome-wide analysis of common fragile sites: what features determine chromosomal instability in the human genome?
Arkarachai Fungtammasan, Erin Walsh, Francesca Chiaromonte, Kristin A Eckert, Kateryna D Makova. Genome Res 2012
103
25

Transcription-dependent regulation of replication dynamics modulates genome stability.
Marion Blin, Benoît Le Tallec, Viola Nähse, Mélanie Schmidt, Caroline Brossas, Gael A Millot, Marie-Noëlle Prioleau, Michelle Debatisse. Nat Struct Mol Biol 2019
33
25

Dynamic loading and redistribution of the Mcm2-7 helicase complex through the cell cycle.
Sara K Powell, Heather K MacAlpine, Joseph A Prinz, Yulong Li, Jason A Belsky, David M MacAlpine. EMBO J 2015
48
25

Updating the mechanisms of common fragile site instability: how to reconcile the different views?
Benoît Le Tallec, Stéphane Koundrioukoff, Therese Wilhelm, Anne Letessier, Olivier Brison, Michelle Debatisse. Cell Mol Life Sci 2014
39
25


FANCD2 binding identifies conserved fragile sites at large transcribed genes in avian cells.
Constanze Pentzold, Shiraz Ali Shah, Niels Richard Hansen, Benoît Le Tallec, Andaine Seguin-Orlando, Michelle Debatisse, Michael Lisby, Vibe H Oestergaard. Nucleic Acids Res 2018
24
25


Replication stress induces accumulation of FANCD2 at central region of large fragile genes.
Yusuke Okamoto, Watal M Iwasaki, Kazuto Kugou, Kazuki K Takahashi, Arisa Oda, Koichi Sato, Wataru Kobayashi, Hidehiko Kawai, Ryo Sakasai, Akifumi Takaori-Kondo,[...]. Nucleic Acids Res 2018
39
25

DNA polymerases eta and kappa exchange with the polymerase delta holoenzyme to complete common fragile site synthesis.
Ryan P Barnes, Suzanne E Hile, Marietta Y Lee, Kristin A Eckert. DNA Repair (Amst) 2017
28
25

Wwox-Brca1 interaction: role in DNA repair pathway choice.
M S Schrock, B Batar, J Lee, T Druck, B Ferguson, J H Cho, K Akakpo, H Hagrass, N A Heerema, F Xia,[...]. Oncogene 2017
28
25

Transcription-replication encounters, consequences and genomic instability.
Anne Helmrich, Monica Ballarino, Evgeny Nudler, Laszlo Tora. Nat Struct Mol Biol 2013
172
25

Cell-type-specific replication initiation programs set fragility of the FRA3B fragile site.
Anne Letessier, Gaël A Millot, Stéphane Koundrioukoff, Anne-Marie Lachagès, Nicolas Vogt, R Scott Hansen, Bernard Malfoy, Olivier Brison, Michelle Debatisse. Nature 2011
290
25

Genomic instability in fragile sites-still adding the pieces.
Michal Irony-Tur Sinai, Batsheva Kerem. Genes Chromosomes Cancer 2019
10
25


The Fanconi anemia pathway is required for the DNA replication stress response and for the regulation of common fragile site stability.
Niall G Howlett, Toshiyasu Taniguchi, Sandra G Durkin, Alan D D'Andrea, Thomas W Glover. Hum Mol Genet 2005
210
25

Replicating Large Genomes: Divide and Conquer.
Juan Carlos Rivera-Mulia, David M Gilbert. Mol Cell 2016
48
25

Rad18-dependent SUMOylation of human specialized DNA polymerase eta is required to prevent under-replicated DNA.
Emmanuelle Despras, Méghane Sittewelle, Caroline Pouvelle, Noémie Delrieu, Agnès M Cordonnier, Patricia L Kannouche. Nat Commun 2016
44
25

Premature condensation induces breaks at the interface of early and late replicating chromosome bands bearing common fragile sites.
Eliane El Achkar, Michelle Gerbault-Seureau, Martine Muleris, Bernard Dutrillaux, Michelle Debatisse. Proc Natl Acad Sci U S A 2005
77
25

Bubble-seq analysis of the human genome reveals distinct chromatin-mediated mechanisms for regulating early- and late-firing origins.
Larry D Mesner, Veena Valsakumar, Marcin Cieslik, Rebecca Pickin, Joyce L Hamlin, Stefan Bekiranov. Genome Res 2013
51
25

Regulating DNA replication in eukarya.
Khalid Siddiqui, Kin Fan On, John F X Diffley. Cold Spring Harb Perspect Biol 2013
137
25



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.