A citation-based method for searching scientific literature

Terje Johansen, Trond Lamark. J Mol Biol 2020
Times Cited: 185







List of co-cited articles
1307 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mechanism and medical implications of mammalian autophagy.
Ivan Dikic, Zvulun Elazar. Nat Rev Mol Cell Biol 2018
25

p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagy.
Serhiy Pankiv, Terje Høyvarde Clausen, Trond Lamark, Andreas Brech, Jack-Ansgar Bruun, Heidi Outzen, Aud Øvervatn, Geir Bjørkøy, Terje Johansen. J Biol Chem 2007
24

Cargo recognition and degradation by selective autophagy.
Damián Gatica, Vikramjit Lahiri, Daniel J Klionsky. Nat Cell Biol 2018
443
22

The LIR motif - crucial for selective autophagy.
Åsa Birna Birgisdottir, Trond Lamark, Terje Johansen. J Cell Sci 2013
491
22

p62/SQSTM1 forms protein aggregates degraded by autophagy and has a protective effect on huntingtin-induced cell death.
Geir Bjørkøy, Trond Lamark, Andreas Brech, Heidi Outzen, Maria Perander, Aud Overvatn, Harald Stenmark, Terje Johansen. J Cell Biol 2005
20

Selective autophagy mediated by autophagic adapter proteins.
Terje Johansen, Trond Lamark. Autophagy 2011
20


Spatiotemporal Control of ULK1 Activation by NDP52 and TBK1 during Selective Autophagy.
Jose Norberto S Vargas, Chunxin Wang, Eric Bunker, Ling Hao, Dragan Maric, Giampietro Schiavo, Felix Randow, Richard J Youle. Mol Cell 2019
176
18

A role for NBR1 in autophagosomal degradation of ubiquitinated substrates.
Vladimir Kirkin, Trond Lamark, Yu-Shin Sou, Geir Bjørkøy, Jennifer L Nunn, Jack-Ansgar Bruun, Elena Shvets, David G McEwan, Terje H Clausen, Philipp Wild,[...]. Mol Cell 2009
772
17

The ubiquitin kinase PINK1 recruits autophagy receptors to induce mitophagy.
Michael Lazarou, Danielle A Sliter, Lesley A Kane, Shireen A Sarraf, Chunxin Wang, Jonathon L Burman, Dionisia P Sideris, Adam I Fogel, Richard J Youle. Nature 2015
16


The Cargo Receptor NDP52 Initiates Selective Autophagy by Recruiting the ULK Complex to Cytosol-Invading Bacteria.
Benjamin J Ravenhill, Keith B Boyle, Natalia von Muhlinen, Cara J Ellison, Glenn R Masson, Elsje G Otten, Agnes Foeglein, Roger Williams, Felix Randow. Mol Cell 2019
134
15

A ubiquitin-like system mediates protein lipidation.
Y Ichimura, T Kirisako, T Takao, Y Satomi, Y Shimonishi, N Ishihara, N Mizushima, I Tanida, E Kominami, M Ohsumi,[...]. Nature 2000
15

The role of Atg proteins in autophagosome formation.
Noboru Mizushima, Tamotsu Yoshimori, Yoshinori Ohsumi. Annu Rev Cell Dev Biol 2011
15

Phosphorylation of OPTN by TBK1 enhances its binding to Ub chains and promotes selective autophagy of damaged mitochondria.
Benjamin Richter, Danielle A Sliter, Lina Herhaus, Alexandra Stolz, Chunxin Wang, Petra Beli, Gabriele Zaffagnini, Philipp Wild, Sascha Martens, Sebastian A Wagner,[...]. Proc Natl Acad Sci U S A 2016
383
15

Phosphorylation of the autophagy receptor optineurin restricts Salmonella growth.
Philipp Wild, Hesso Farhan, David G McEwan, Sebastian Wagner, Vladimir V Rogov, Nathan R Brady, Benjamin Richter, Jelena Korac, Oliver Waidmann, Chunaram Choudhary,[...]. Science 2011
862
14

Cargo recognition and trafficking in selective autophagy.
Alexandra Stolz, Andreas Ernst, Ivan Dikic. Nat Cell Biol 2014
718
14

LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing.
Y Kabeya, N Mizushima, T Ueno, A Yamamoto, T Kirisako, T Noda, E Kominami, Y Ohsumi, T Yoshimori. EMBO J 2000
14

Polyubiquitin chain-induced p62 phase separation drives autophagic cargo segregation.
Daxiao Sun, Rongbo Wu, Jingxiang Zheng, Pilong Li, Li Yu. Cell Res 2018
162
14

FIP200 Claw Domain Binding to p62 Promotes Autophagosome Formation at Ubiquitin Condensates.
Eleonora Turco, Marie Witt, Christine Abert, Tobias Bock-Bierbaum, Ming-Yuan Su, Riccardo Trapannone, Martin Sztacho, Alberto Danieli, Xiaoshan Shi, Gabriele Zaffagnini,[...]. Mol Cell 2019
124
14

Autophagy: renovation of cells and tissues.
Noboru Mizushima, Masaaki Komatsu. Cell 2011
14

Structural basis for sorting mechanism of p62 in selective autophagy.
Yoshinobu Ichimura, Taichi Kumanomidou, Yu-shin Sou, Tsunehiro Mizushima, Junji Ezaki, Takashi Ueno, Eiki Kominami, Takashi Yamane, Keiji Tanaka, Masaaki Komatsu. J Biol Chem 2008
545
13

Molecular determinants regulating selective binding of autophagy adapters and receptors to ATG8 proteins.
Martina Wirth, Wenxin Zhang, Minoo Razi, Lynet Nyoni, Dhira Joshi, Nicola O'Reilly, Terje Johansen, Sharon A Tooze, Stéphane Mouilleron. Nat Commun 2019
51
25

Mitochondrial outer-membrane protein FUNDC1 mediates hypoxia-induced mitophagy in mammalian cells.
Lei Liu, Du Feng, Guo Chen, Ming Chen, Qiaoxia Zheng, Pingping Song, Qi Ma, Chongzhuo Zhu, Rui Wang, Wanjun Qi,[...]. Nat Cell Biol 2012
842
12

Molecular definitions of autophagy and related processes.
Lorenzo Galluzzi, Eric H Baehrecke, Andrea Ballabio, Patricia Boya, José Manuel Bravo-San Pedro, Francesco Cecconi, Augustine M Choi, Charleen T Chu, Patrice Codogno, Maria Isabel Colombo,[...]. EMBO J 2017
789
12

ATG8-Binding UIM Proteins Define a New Class of Autophagy Adaptors and Receptors.
Richard S Marshall, Zhihua Hua, Sujina Mali, Fionn McLoughlin, Richard D Vierstra. Cell 2019
119
12


LC3C, bound selectively by a noncanonical LIR motif in NDP52, is required for antibacterial autophagy.
Natalia von Muhlinen, Masato Akutsu, Benjamin J Ravenhill, Ágnes Foeglein, Stuart Bloor, Trevor J Rutherford, Stefan M V Freund, David Komander, Felix Randow. Mol Cell 2012
207
12

Cleaning House: Selective Autophagy of Organelles.
Allyson L Anding, Eric H Baehrecke. Dev Cell 2017
298
11

Regulation of endoplasmic reticulum turnover by selective autophagy.
Aliaksandr Khaminets, Theresa Heinrich, Muriel Mari, Paolo Grumati, Antje K Huebner, Masato Akutsu, Lutz Liebmann, Alexandra Stolz, Sandor Nietzsche, Nicole Koch,[...]. Nature 2015
474
11

The ATG conjugation systems are important for degradation of the inner autophagosomal membrane.
Kotaro Tsuboyama, Ikuko Koyama-Honda, Yuriko Sakamaki, Masato Koike, Hideaki Morishita, Noboru Mizushima. Science 2016
263
11

Mechanisms governing autophagosome biogenesis.
Hitoshi Nakatogawa. Nat Rev Mol Cell Biol 2020
157
11

ULK1 induces autophagy by phosphorylating Beclin-1 and activating VPS34 lipid kinase.
Ryan C Russell, Ye Tian, Haixin Yuan, Hyun Woo Park, Yu-Yun Chang, Joungmok Kim, Haerin Kim, Thomas P Neufeld, Andrew Dillin, Kun-Liang Guan. Nat Cell Biol 2013
924
11

Atg8 family LC3/GABARAP proteins are crucial for autophagosome-lysosome fusion but not autophagosome formation during PINK1/Parkin mitophagy and starvation.
Thanh Ngoc Nguyen, Benjamin Scott Padman, Joanne Usher, Viola Oorschot, Georg Ramm, Michael Lazarou. J Cell Biol 2016
306
11

Atg8-family interacting motif crucial for selective autophagy.
Nobuo N Noda, Yoshinori Ohsumi, Fuyuhiko Inagaki. FEBS Lett 2010
320
10

The TBK1 adaptor and autophagy receptor NDP52 restricts the proliferation of ubiquitin-coated bacteria.
Teresa L M Thurston, Grigory Ryzhakov, Stuart Bloor, Natalia von Muhlinen, Felix Randow. Nat Immunol 2009
604
10

p62 filaments capture and present ubiquitinated cargos for autophagy.
Gabriele Zaffagnini, Adriana Savova, Alberto Danieli, Julia Romanov, Shirley Tremel, Michael Ebner, Thomas Peterbauer, Martin Sztacho, Riccardo Trapannone, Abul K Tarafder,[...]. EMBO J 2018
140
10

The Atg16L complex specifies the site of LC3 lipidation for membrane biogenesis in autophagy.
Naonobu Fujita, Takashi Itoh, Hiroko Omori, Mitsunori Fukuda, Takeshi Noda, Tamotsu Yoshimori. Mol Biol Cell 2008
703
10

Phase separation organizes the site of autophagosome formation.
Yuko Fujioka, Jahangir Md Alam, Daisuke Noshiro, Kazunari Mouri, Toshio Ando, Yasushi Okada, Alexander I May, Roland L Knorr, Kuninori Suzuki, Yoshinori Ohsumi,[...]. Nature 2020
111
10

The selective autophagy substrate p62 activates the stress responsive transcription factor Nrf2 through inactivation of Keap1.
Masaaki Komatsu, Hirofumi Kurokawa, Satoshi Waguri, Keiko Taguchi, Akira Kobayashi, Yoshinobu Ichimura, Yu-Shin Sou, Izumi Ueno, Ayako Sakamoto, Kit I Tong,[...]. Nat Cell Biol 2010
10

AMPK and mTOR regulate autophagy through direct phosphorylation of Ulk1.
Joungmok Kim, Mondira Kundu, Benoit Viollet, Kun-Liang Guan. Nat Cell Biol 2011
10

Autophagy in Human Diseases.
Noboru Mizushima, Beth Levine. N Engl J Med 2020
165
10


Autophagosome formation from membrane compartments enriched in phosphatidylinositol 3-phosphate and dynamically connected to the endoplasmic reticulum.
Elizabeth L Axe, Simon A Walker, Maria Manifava, Priya Chandra, H Llewelyn Roderick, Anja Habermann, Gareth Griffiths, Nicholas T Ktistakis. J Cell Biol 2008
9

Mechanisms of Autophagy Initiation.
James H Hurley, Lindsey N Young. Annu Rev Biochem 2017
315
9

Dynamic association of the ULK1 complex with omegasomes during autophagy induction.
Eleftherios Karanasios, Eloise Stapleton, Maria Manifava, Takeshi Kaizuka, Noboru Mizushima, Simon A Walker, Nicholas T Ktistakis. J Cell Sci 2013
144
9


Autophagy and the integrated stress response.
Guido Kroemer, Guillermo Mariño, Beth Levine. Mol Cell 2010
9

Phosphorylation of p62 activates the Keap1-Nrf2 pathway during selective autophagy.
Yoshinobu Ichimura, Satoshi Waguri, Yu-Shin Sou, Shun Kageyama, Jun Hasegawa, Ryosuke Ishimura, Tetsuya Saito, Yinjie Yang, Tsuguka Kouno, Toshiaki Fukutomi,[...]. Mol Cell 2013
610
9

Oligomerization of p62 allows for selection of ubiquitinated cargo and isolation membrane during selective autophagy.
Bettina Wurzer, Gabriele Zaffagnini, Dorotea Fracchiolla, Eleonora Turco, Christine Abert, Julia Romanov, Sascha Martens. Elife 2015
143
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.