A citation-based method for searching scientific literature

Alexander E Linsalata, Fang He, Ahmed M Malik, Mary Rebecca Glineburg, Katelyn M Green, Sam Natla, Brittany N Flores, Amy Krans, Hilary C Archbold, Stephen J Fedak, Sami J Barmada, Peter K Todd. EMBO Rep 2019
Times Cited: 21







List of co-cited articles
210 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


CRISPR-Cas9 Screens Identify the RNA Helicase DDX3X as a Repressor of C9ORF72 (GGGGCC)n Repeat-Associated Non-AUG Translation.
Weiwei Cheng, Shaopeng Wang, Zhe Zhang, David W Morgens, Lindsey R Hayes, Soojin Lee, Bede Portz, Yongzhi Xie, Baotram V Nguyen, Michael S Haney,[...]. Neuron 2019
46
61

RAN translation at C9orf72-associated repeat expansions is selectively enhanced by the integrated stress response.
Katelyn M Green, M Rebecca Glineburg, Michael G Kearse, Brittany N Flores, Alexander E Linsalata, Stephen J Fedak, Aaron C Goldstrohm, Sami J Barmada, Peter K Todd. Nat Commun 2017
87
47

CGG Repeat-Associated Non-AUG Translation Utilizes a Cap-Dependent Scanning Mechanism of Initiation to Produce Toxic Proteins.
Michael G Kearse, Katelyn M Green, Amy Krans, Caitlin M Rodriguez, Alexander E Linsalata, Aaron C Goldstrohm, Peter K Todd. Mol Cell 2016
82
47

C9ORF72 GGGGCC repeat-associated non-AUG translation is upregulated by stress through eIF2α phosphorylation.
Weiwei Cheng, Shaopeng Wang, Alexander A Mestre, Chenglai Fu, Andres Makarem, Fengfan Xian, Lindsey R Hayes, Rodrigo Lopez-Gonzalez, Kevin Drenner, Jie Jiang,[...]. Nat Commun 2018
77
42

CUG initiation and frameshifting enable production of dipeptide repeat proteins from ALS/FTD C9ORF72 transcripts.
Ricardos Tabet, Laure Schaeffer, Fernande Freyermuth, Melanie Jambeau, Michael Workman, Chao-Zong Lee, Chun-Chia Lin, Jie Jiang, Karen Jansen-West, Hussein Abou-Hamdan,[...]. Nat Commun 2018
66
38

RPS25 is required for efficient RAN translation of C9orf72 and other neurodegenerative disease-associated nucleotide repeats.
Shizuka B Yamada, Tania F Gendron, Teresa Niccoli, Naomi R Genuth, Rosslyn Grosely, Yingxiao Shi, Idoia Glaria, Nicholas J Kramer, Lisa Nakayama, Shirleen Fang,[...]. Nat Neurosci 2019
41
38

Non-ATG-initiated translation directed by microsatellite expansions.
Tao Zu, Brian Gibbens, Noelle S Doty, Mário Gomes-Pereira, Aline Huguet, Matthew D Stone, Jamie Margolis, Mark Peterson, Todd W Markowski, Melissa A C Ingram,[...]. Proc Natl Acad Sci U S A 2011
539
38

CGG repeat-associated translation mediates neurodegeneration in fragile X tremor ataxia syndrome.
Peter K Todd, Seok Yoon Oh, Amy Krans, Fang He, Chantal Sellier, Michelle Frazer, Abigail J Renoux, Kai-chun Chen, K Matthew Scaglione, Venkatesha Basrur,[...]. Neuron 2013
289
33

Translation of Expanded CGG Repeats into FMRpolyG Is Pathogenic and May Contribute to Fragile X Tremor Ataxia Syndrome.
Chantal Sellier, Ronald A M Buijsen, Fang He, Sam Natla, Laura Jung, Philippe Tropel, Angeline Gaucherot, Hugues Jacobs, Hamid Meziane, Alexandre Vincent,[...]. Neuron 2017
114
33

Repeat-associated non-AUG translation in C9orf72-ALS/FTD is driven by neuronal excitation and stress.
Thomas Westergard, Kevin McAvoy, Katelyn Russell, Xinmei Wen, Yu Pang, Brandie Morris, Piera Pasinelli, Davide Trotti, Aaron Haeusler. EMBO Mol Med 2019
47
33

Translation of dipeptide repeat proteins from the C9ORF72 expanded repeat is associated with cellular stress.
Yoshifumi Sonobe, Ghanashyam Ghadge, Katsuhisa Masaki, Ataman Sendoel, Elaine Fuchs, Raymond P Roos. Neurobiol Dis 2018
36
33

Unconventional translation of C9ORF72 GGGGCC expansion generates insoluble polypeptides specific to c9FTD/ALS.
Peter E A Ash, Kevin F Bieniek, Tania F Gendron, Thomas Caulfield, Wen-Lang Lin, Mariely Dejesus-Hernandez, Marka M van Blitterswijk, Karen Jansen-West, Joseph W Paul, Rosa Rademakers,[...]. Neuron 2013
698
33

RAN proteins and RNA foci from antisense transcripts in C9ORF72 ALS and frontotemporal dementia.
Tao Zu, Yuanjing Liu, Monica Bañez-Coronel, Tammy Reid, Olga Pletnikova, Jada Lewis, Timothy M Miller, Matthew B Harms, Annet E Falchook, S H Subramony,[...]. Proc Natl Acad Sci U S A 2013
474
33

eIF4B and eIF4H mediate GR production from expanded G4C2 in a Drosophila model for C9orf72-associated ALS.
Lindsey D Goodman, Mercedes Prudencio, Ananth R Srinivasan, Olivia M Rifai, Virginia M-Y Lee, Leonard Petrucelli, Nancy M Bonini. Acta Neuropathol Commun 2019
19
31

The C9orf72 GGGGCC repeat is translated into aggregating dipeptide-repeat proteins in FTLD/ALS.
Kohji Mori, Shih-Ming Weng, Thomas Arzberger, Stephanie May, Kristin Rentzsch, Elisabeth Kremmer, Bettina Schmid, Hans A Kretzschmar, Marc Cruts, Christine Van Broeckhoven,[...]. Science 2013
786
28

The mechanism of eukaryotic translation initiation and principles of its regulation.
Richard J Jackson, Christopher U T Hellen, Tatyana V Pestova. Nat Rev Mol Cell Biol 2010
23

Antisense transcripts of the expanded C9ORF72 hexanucleotide repeat form nuclear RNA foci and undergo repeat-associated non-ATG translation in c9FTD/ALS.
Tania F Gendron, Kevin F Bieniek, Yong-Jie Zhang, Karen Jansen-West, Peter E A Ash, Thomas Caulfield, Lillian Daughrity, Judith H Dunmore, Monica Castanedes-Casey, Jeannie Chew,[...]. Acta Neuropathol 2013
348
23

Mutations in DDX3X Are a Common Cause of Unexplained Intellectual Disability with Gender-Specific Effects on Wnt Signaling.
Lot Snijders Blok, Erik Madsen, Jane Juusola, Christian Gilissen, Diana Baralle, Margot R F Reijnders, Hanka Venselaar, Céline Helsmoortel, Megan T Cho, Alexander Hoischen,[...]. Am J Hum Genet 2015
112
19

Identification of a gene (FMR-1) containing a CGG repeat coincident with a breakpoint cluster region exhibiting length variation in fragile X syndrome.
A J Verkerk, M Pieretti, J S Sutcliffe, Y H Fu, D P Kuhl, A Pizzuti, O Reiner, S Richards, M F Victoria, F P Zhang. Cell 1991
19

Repeat expansion diseases.
Henry Paulson. Handb Clin Neurol 2018
112
19

Critical roles of RNA helicase DDX3 and its interactions with eIF4E/PABP1 in stress granule assembly and stress response.
Jing-Wen Shih, Wei-Ting Wang, Tsung-Yuan Tsai, Chu-Yun Kuo, Hao-Kang Li, Yan-Hwa Wu Lee. Biochem J 2012
114
19

Cancer-associated DDX3X mutations drive stress granule assembly and impair global translation.
Yasmine A Valentin-Vega, Yong-Dong Wang, Matthew Parker, Deanna M Patmore, Anderson Kanagaraj, Jennifer Moore, Michael Rusch, David Finkelstein, David W Ellison, Richard J Gilbertson,[...]. Sci Rep 2016
64
19

The X-Linked DDX3X RNA Helicase Dictates Translation Reprogramming and Metastasis in Melanoma.
Bengt Phung, Maciej Cieśla, Adriana Sanna, Nicola Guzzi, Giulia Beneventi, Phuong Cao Thi Ngoc, Martin Lauss, Rita Cabrita, Eugenia Cordero, Ana Bosch,[...]. Cell Rep 2019
29
19

Pathogenic DDX3X Mutations Impair RNA Metabolism and Neurogenesis during Fetal Cortical Development.
Ashley L Lennox, Mariah L Hoye, Ruiji Jiang, Bethany L Johnson-Kerner, Lindsey A Suit, Srivats Venkataramanan, Charles J Sheehan, Fernando C Alsina, Brieana Fregeau, Kimberly A Aldinger,[...]. Neuron 2020
35
19

Heterochromatin anomalies and double-stranded RNA accumulation underlie C9orf72 poly(PR) toxicity.
Yong-Jie Zhang, Lin Guo, Patrick K Gonzales, Tania F Gendron, Yanwei Wu, Karen Jansen-West, Aliesha D O'Raw, Sarah R Pickles, Mercedes Prudencio, Yari Carlomagno,[...]. Science 2019
86
19

RAN Translation in Huntington Disease.
Monica Bañez-Coronel, Fatma Ayhan, Alex D Tarabochia, Tao Zu, Barbara A Perez, Solaleh Khoramian Tusi, Olga Pletnikova, David R Borchelt, Christopher A Ross, Russell L Margolis,[...]. Neuron 2015
172
19

RAN Translation Regulated by Muscleblind Proteins in Myotonic Dystrophy Type 2.
Tao Zu, John D Cleary, Yuanjing Liu, Monica Bañez-Coronel, Jodi L Bubenik, Fatma Ayhan, Tetsuo Ashizawa, Guangbin Xia, H Brent Clark, Anthony T Yachnis,[...]. Neuron 2017
57
19

Drosophila screen connects nuclear transport genes to DPR pathology in c9ALS/FTD.
Steven Boeynaems, Elke Bogaert, Emiel Michiels, Ilse Gijselinck, Anne Sieben, Ana Jovičić, Greet De Baets, Wendy Scheveneels, Jolien Steyaert, Ivy Cuijt,[...]. Sci Rep 2016
164
19

SCA8 RAN polySer protein preferentially accumulates in white matter regions and is regulated by eIF3F.
Fatma Ayhan, Barbara A Perez, Hannah K Shorrock, Tao Zu, Monica Banez-Coronel, Tammy Reid, Hirokazu Furuya, H Brent Clark, Juan C Troncoso, Christopher A Ross,[...]. EMBO J 2018
19
21

Repeat-Associated Non-ATG Translation: Molecular Mechanisms and Contribution to Neurological Disease.
Lien Nguyen, John Douglas Cleary, Laura P W Ranum. Annu Rev Neurosci 2019
33
19

Repeat-Associated Non-ATG (RAN) Translation in Fuchs' Endothelial Corneal Dystrophy.
Elisabetta Soragni, Lina Petrosyan, Tommy A Rinkoski, Eric D Wieben, Keith H Baratz, Michael P Fautsch, Joel M Gottesfeld. Invest Ophthalmol Vis Sci 2018
27
19

Regulatory Role of RNA Chaperone TDP-43 for RNA Misfolding and Repeat-Associated Translation in SCA31.
Taro Ishiguro, Nozomu Sato, Morio Ueyama, Nobuhiro Fujikake, Chantal Sellier, Akemi Kanegami, Eiichi Tokuda, Bita Zamiri, Terence Gall-Duncan, Mila Mirceta,[...]. Neuron 2017
62
19


Poly(GR) impairs protein translation and stress granule dynamics in C9orf72-associated frontotemporal dementia and amyotrophic lateral sclerosis.
Yong-Jie Zhang, Tania F Gendron, Mark T W Ebbert, Aliesha D O'Raw, Mei Yue, Karen Jansen-West, Xu Zhang, Mercedes Prudencio, Jeannie Chew, Casey N Cook,[...]. Nat Med 2018
130
19

Hexanucleotide repeats in ALS/FTD form length-dependent RNA foci, sequester RNA binding proteins, and are neurotoxic.
Youn-Bok Lee, Han-Jou Chen, João N Peres, Jorge Gomez-Deza, Jan Attig, Maja Stalekar, Claire Troakes, Agnes L Nishimura, Emma L Scotter, Caroline Vance,[...]. Cell Rep 2013
302
19

Haploinsufficiency leads to neurodegeneration in C9ORF72 ALS/FTD human induced motor neurons.
Yingxiao Shi, Shaoyu Lin, Kim A Staats, Yichen Li, Wen-Hsuan Chang, Shu-Ting Hung, Eric Hendricks, Gabriel R Linares, Yaoming Wang, Esther Y Son,[...]. Nat Med 2018
230
19

C9orf72 repeat expansions cause neurodegeneration in Drosophila through arginine-rich proteins.
Sarah Mizielinska, Sebastian Grönke, Teresa Niccoli, Charlotte E Ridler, Emma L Clayton, Anny Devoy, Thomas Moens, Frances E Norona, Ione O C Woollacott, Julian Pietrzyk,[...]. Science 2014
402
19

Sequestration of multiple RNA recognition motif-containing proteins by C9orf72 repeat expansions.
Johnathan Cooper-Knock, Matthew J Walsh, Adrian Higginbottom, J Robin Highley, Mark J Dickman, Dieter Edbauer, Paul G Ince, Stephen B Wharton, Stuart A Wilson, Janine Kirby,[...]. Brain 2014
192
19

Pur alpha binds to rCGG repeats and modulates repeat-mediated neurodegeneration in a Drosophila model of fragile X tremor/ataxia syndrome.
Peng Jin, Ranhui Duan, Abrar Qurashi, Yunlong Qin, Donghua Tian, Tracie C Rosser, Huijie Liu, Yue Feng, Stephen T Warren. Neuron 2007
224
19

The C9ORF72 GGGGCC expansion forms RNA G-quadruplex inclusions and sequesters hnRNP H to disrupt splicing in ALS brains.
Erin G Conlon, Lei Lu, Aarti Sharma, Takashi Yamazaki, Timothy Tang, Neil A Shneider, James L Manley. Elife 2016
140
19

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
14

From unwinding to clamping - the DEAD box RNA helicase family.
Patrick Linder, Eckhard Jankowsky. Nat Rev Mol Cell Biol 2011
577
14

High-throughput screening yields several small-molecule inhibitors of repeat-associated non-AUG translation.
Katelyn M Green, Udit J Sheth, Brittany N Flores, Shannon E Wright, Alexandra B Sutter, Michael G Kearse, Sami J Barmada, Magdalena I Ivanova, Peter K Todd. J Biol Chem 2019
20
15

Translational control by 5'-untranslated regions of eukaryotic mRNAs.
Alan G Hinnebusch, Ivaylo P Ivanov, Nahum Sonenberg. Science 2016
440
14

DDX3X acts as a live-or-die checkpoint in stressed cells by regulating NLRP3 inflammasome.
Parimal Samir, Sannula Kesavardhana, Deanna M Patmore, Sebastien Gingras, R K Subbarao Malireddi, Rajendra Karki, Clifford S Guy, Benoit Briard, David E Place, Anannya Bhattacharya,[...]. Nature 2019
100
14


De Novo Missense Mutations in DHX30 Impair Global Translation and Cause a Neurodevelopmental Disorder.
Davor Lessel, Claudia Schob, Sébastien Küry, Margot R F Reijnders, Tamar Harel, Mohammad K Eldomery, Zeynep Coban-Akdemir, Jonas Denecke, Shimon Edvardson, Estelle Colin,[...]. Am J Hum Genet 2017
34
14

A hypomorphic inherited pathogenic variant in DDX3X causes male intellectual disability with additional neurodevelopmental and neurodegenerative features.
Georgios Kellaris, Kamal Khan, Shahid M Baig, I-Chun Tsai, Francisca Millan Zamora, Paul Ruggieri, Marvin R Natowicz, Nicholas Katsanis. Hum Genomics 2018
18
16

SUnSET, a nonradioactive method to monitor protein synthesis.
Enrico K Schmidt, Giovanna Clavarino, Maurizio Ceppi, Philippe Pierre. Nat Methods 2009
784
14

Context-Dependent and Disease-Specific Diversity in Protein Interactions within Stress Granules.
Sebastian Markmiller, Sahar Soltanieh, Kari L Server, Raymond Mak, Wenhao Jin, Mark Y Fang, En-Ching Luo, Florian Krach, Dejun Yang, Anindya Sen,[...]. Cell 2018
310
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.