A citation-based method for searching scientific literature

Veronika Kana, Fiona A Desland, Maria Casanova-Acebes, Pinar Ayata, Ana Badimon, Elisa Nabel, Kazuhiko Yamamuro, Marjolein Sneeboer, I-Li Tan, Meghan E Flanigan, Samuel A Rose, Christie Chang, Andrew Leader, Hortense Le Bourhis, Eric S Sweet, Navpreet Tung, Aleksandra Wroblewska, Yonit Lavin, Peter See, Alessia Baccarini, Florent Ginhoux, Violeta Chitu, E Richard Stanley, Scott J Russo, Zhenyu Yue, Brian D Brown, Alexandra L Joyner, Lotje D De Witte, Hirofumi Morishita, Anne Schaefer, Miriam Merad. J Exp Med 2019
Times Cited: 81







List of co-cited articles
1253 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Fate mapping analysis reveals that adult microglia derive from primitive macrophages.
Florent Ginhoux, Melanie Greter, Marylene Leboeuf, Sayan Nandi, Peter See, Solen Gokhan, Mark F Mehler, Simon J Conway, Lai Guan Ng, E Richard Stanley,[...]. Science 2010
54

Colony-stimulating factor 1 receptor signaling is necessary for microglia viability, unmasking a microglia progenitor cell in the adult brain.
Monica R P Elmore, Allison R Najafi, Maya A Koike, Nabil N Dagher, Elizabeth E Spangenberg, Rachel A Rice, Masashi Kitazawa, Bernice Matusow, Hoa Nguyen, Brian L West,[...]. Neuron 2014
955
45

IL-34 is a tissue-restricted ligand of CSF1R required for the development of Langerhans cells and microglia.
Yaming Wang, Kristy J Szretter, William Vermi, Susan Gilfillan, Cristina Rossini, Marina Cella, Alexander D Barrow, Michael S Diamond, Marco Colonna. Nat Immunol 2012
576
43

A Unique Microglia Type Associated with Restricting Development of Alzheimer's Disease.
Hadas Keren-Shaul, Amit Spinrad, Assaf Weiner, Orit Matcovitch-Natan, Raz Dvir-Szternfeld, Tyler K Ulland, Eyal David, Kuti Baruch, David Lara-Astaiso, Beata Toth,[...]. Cell 2017
37

Stroma-derived interleukin-34 controls the development and maintenance of langerhans cells and the maintenance of microglia.
Melanie Greter, Iva Lelios, Pawel Pelczar, Guillaume Hoeffel, Jeremy Price, Marylene Leboeuf, Thomas M Kündig, Karl Frei, Florent Ginhoux, Miriam Merad,[...]. Immunity 2012
372
37

Spatial and temporal heterogeneity of mouse and human microglia at single-cell resolution.
Takahiro Masuda, Roman Sankowski, Ori Staszewski, Chotima Böttcher, Lukas Amann, Sagar, Christian Scheiwe, Stefan Nessler, Patrik Kunz, Geert van Loo,[...]. Nature 2019
460
34

Single-Cell RNA Sequencing of Microglia throughout the Mouse Lifespan and in the Injured Brain Reveals Complex Cell-State Changes.
Timothy R Hammond, Connor Dufort, Lasse Dissing-Olesen, Stefanie Giera, Adam Young, Alec Wysoker, Alec J Walker, Frederick Gergits, Michael Segel, James Nemesh,[...]. Immunity 2019
682
33

Identification of a unique TGF-β-dependent molecular and functional signature in microglia.
Oleg Butovsky, Mark P Jedrychowski, Craig S Moore, Ron Cialic, Amanda J Lanser, Galina Gabriely, Thomas Koeglsperger, Ben Dake, Pauline M Wu, Camille E Doykan,[...]. Nat Neurosci 2014
29

Synaptic pruning by microglia is necessary for normal brain development.
Rosa C Paolicelli, Giulia Bolasco, Francesca Pagani, Laura Maggi, Maria Scianni, Patrizia Panzanelli, Maurizio Giustetto, Tiago Alves Ferreira, Eva Guiducci, Laura Dumas,[...]. Science 2011
28

Epigenetic regulation of brain region-specific microglia clearance activity.
Pinar Ayata, Ana Badimon, Hayley J Strasburger, Mary Kaye Duff, Sarah E Montgomery, Yong-Hwee E Loh, Anja Ebert, Anna A Pimenova, Brianna R Ramirez, Andrew T Chan,[...]. Nat Neurosci 2018
193
28

Developmental Heterogeneity of Microglia and Brain Myeloid Cells Revealed by Deep Single-Cell RNA Sequencing.
Qingyun Li, Zuolin Cheng, Lu Zhou, Spyros Darmanis, Norma F Neff, Jennifer Okamoto, Gunsagar Gulati, Mariko L Bennett, Lu O Sun, Laura E Clarke,[...]. Neuron 2019
368
27

Microglia emerge from erythromyeloid precursors via Pu.1- and Irf8-dependent pathways.
Katrin Kierdorf, Daniel Erny, Tobias Goldmann, Victor Sander, Christian Schulz, Elisa Gomez Perdiguero, Peter Wieghofer, Annette Heinrich, Pia Riemke, Christoph Hölscher,[...]. Nat Neurosci 2013
843
27

Absence of colony stimulation factor-1 receptor results in loss of microglia, disrupted brain development and olfactory deficits.
Bryna Erblich, Liyin Zhu, Anne M Etgen, Kostantin Dobrenis, Jeffrey W Pollard. PLoS One 2011
355
27

Microglia promote learning-dependent synapse formation through brain-derived neurotrophic factor.
Christopher N Parkhurst, Guang Yang, Ipe Ninan, Jeffrey N Savas, John R Yates, Juan J Lafaille, Barbara L Hempstead, Dan R Littman, Wen-Biao Gan. Cell 2013
25

Microglia sculpt postnatal neural circuits in an activity and complement-dependent manner.
Dorothy P Schafer, Emily K Lehrman, Amanda G Kautzman, Ryuta Koyama, Alan R Mardinly, Ryo Yamasaki, Richard M Ransohoff, Michael E Greenberg, Ben A Barres, Beth Stevens. Neuron 2012
25

CSF1R Ligands IL-34 and CSF1 Are Differentially Required for Microglia Development and Maintenance in White and Gray Matter Brain Regions.
Courtney Easley-Neal, Oded Foreman, Neeraj Sharma, Ali A Zarrin, Robby M Weimer. Front Immunol 2019
58
36

The TREM2-APOE Pathway Drives the Transcriptional Phenotype of Dysfunctional Microglia in Neurodegenerative Diseases.
Susanne Krasemann, Charlotte Madore, Ron Cialic, Caroline Baufeld, Narghes Calcagno, Rachid El Fatimy, Lien Beckers, Elaine O'Loughlin, Yang Xu, Zain Fanek,[...]. Immunity 2017
24

Microglia contribute to normal myelinogenesis and to oligodendrocyte progenitor maintenance during adulthood.
Nora Hagemeyer, Klara-Maria Hanft, Maria-Anna Akriditou, Nicole Unger, Eun S Park, E Richard Stanley, Ori Staszewski, Leda Dimou, Marco Prinz. Acta Neuropathol 2017
252
24

Microglia development follows a stepwise program to regulate brain homeostasis.
Orit Matcovitch-Natan, Deborah R Winter, Amir Giladi, Stephanie Vargas Aguilar, Amit Spinrad, Sandrine Sarrazin, Hila Ben-Yehuda, Eyal David, Fabiola Zelada González, Pierre Perrin,[...]. Science 2016
612
24

A lineage of myeloid cells independent of Myb and hematopoietic stem cells.
Christian Schulz, Elisa Gomez Perdiguero, Laurent Chorro, Heather Szabo-Rogers, Nicolas Cagnard, Katrin Kierdorf, Marco Prinz, Bishan Wu, Sten Eirik W Jacobsen, Jeffrey W Pollard,[...]. Science 2012
24

Origin, fate and dynamics of macrophages at central nervous system interfaces.
Tobias Goldmann, Peter Wieghofer, Marta Joana Costa Jordão, Fabiola Prutek, Nora Hagemeyer, Kathrin Frenzel, Lukas Amann, Ori Staszewski, Katrin Kierdorf, Martin Krueger,[...]. Nat Immunol 2016
565
23

Coupled Proliferation and Apoptosis Maintain the Rapid Turnover of Microglia in the Adult Brain.
Katharine Askew, Kaizhen Li, Adrian Olmos-Alonso, Fernando Garcia-Moreno, Yajie Liang, Philippa Richardson, Tom Tipton, Mark A Chapman, Kristoffer Riecken, Sol Beccari,[...]. Cell Rep 2017
345
23

Resting microglial cells are highly dynamic surveillants of brain parenchyma in vivo.
Axel Nimmerjahn, Frank Kirchhoff, Fritjof Helmchen. Science 2005
23

A Combination of Ontogeny and CNS Environment Establishes Microglial Identity.
F Chris Bennett, Mariko L Bennett, Fazeela Yaqoob, Sara B Mulinyawe, Gerald A Grant, Melanie Hayden Gephart, Edward D Plowey, Ben A Barres. Neuron 2018
236
23

Targeted disruption of the mouse colony-stimulating factor 1 receptor gene results in osteopetrosis, mononuclear phagocyte deficiency, increased primitive progenitor cell frequencies, and reproductive defects.
Xu-Ming Dai, Gregory R Ryan, Andrew J Hapel, Melissa G Dominguez, Robert G Russell, Sara Kapp, Vonetta Sylvestre, E Richard Stanley. Blood 2002
749
22

Microglial brain region-dependent diversity and selective regional sensitivities to aging.
Kathleen Grabert, Tom Michoel, Michail H Karavolos, Sara Clohisey, J Kenneth Baillie, Mark P Stevens, Tom C Freeman, Kim M Summers, Barry W McColl. Nat Neurosci 2016
615
22

Peripherally derived macrophages can engraft the brain independent of irradiation and maintain an identity distinct from microglia.
James C Cronk, Anthony J Filiano, Antoine Louveau, Ioana Marin, Rachel Marsh, Emily Ji, Dylan H Goldman, Igor Smirnov, Nicholas Geraci, Scott Acton,[...]. J Exp Med 2018
192
22

Tissue-resident macrophages originate from yolk-sac-derived erythro-myeloid progenitors.
Elisa Gomez Perdiguero, Kay Klapproth, Christian Schulz, Katrin Busch, Emanuele Azzoni, Lucile Crozet, Hannah Garner, Celine Trouillet, Marella F de Bruijn, Frederic Geissmann,[...]. Nature 2015
20

Sall1 is a transcriptional regulator defining microglia identity and function.
Anne Buttgereit, Iva Lelios, Xueyang Yu, Melissa Vrohlings, Natalie R Krakoski, Emmanuel L Gautier, Ryuichi Nishinakamura, Burkhard Becher, Melanie Greter. Nat Immunol 2016
291
20

The microglial sensome revealed by direct RNA sequencing.
Suzanne E Hickman, Nathan D Kingery, Toshiro K Ohsumi, Mark L Borowsky, Li-chong Wang, Terry K Means, Joseph El Khoury. Nat Neurosci 2013
884
20

Microglia modulate wiring of the embryonic forebrain.
Paola Squarzoni, Guillaume Oller, Guillaume Hoeffel, Lorena Pont-Lezica, Philippe Rostaing, Donovan Low, Alain Bessis, Florent Ginhoux, Sonia Garel. Cell Rep 2014
371
19

Local Cues Establish and Maintain Region-Specific Phenotypes of Basal Ganglia Microglia.
Lindsay M De Biase, Kornel E Schuebel, Zachary H Fusfeld, Kamwing Jair, Isobel A Hawes, Raffaello Cimbro, Hai-Ying Zhang, Qing-Rong Liu, Hui Shen, Zheng-Xiong Xi,[...]. Neuron 2017
220
19

ATP mediates rapid microglial response to local brain injury in vivo.
Dimitrios Davalos, Jaime Grutzendler, Guang Yang, Jiyun V Kim, Yi Zuo, Steffen Jung, Dan R Littman, Michael L Dustin, Wen-Biao Gan. Nat Neurosci 2005
18

A single-cell atlas of mouse brain macrophages reveals unique transcriptional identities shaped by ontogeny and tissue environment.
Hannah Van Hove, Liesbet Martens, Isabelle Scheyltjens, Karen De Vlaminck, Ana Rita Pombo Antunes, Sofie De Prijck, Niels Vandamme, Sebastiaan De Schepper, Gert Van Isterdael, Charlotte L Scott,[...]. Nat Neurosci 2019
306
18

C-Myb(+) erythro-myeloid progenitor-derived fetal monocytes give rise to adult tissue-resident macrophages.
Guillaume Hoeffel, Jinmiao Chen, Yonit Lavin, Donovan Low, Francisca F Almeida, Peter See, Anna E Beaudin, Josephine Lum, Ivy Low, E Camilla Forsberg,[...]. Immunity 2015
625
18

An environment-dependent transcriptional network specifies human microglia identity.
David Gosselin, Dylan Skola, Nicole G Coufal, Inge R Holtman, Johannes C M Schlachetzki, Eniko Sajti, Baptiste N Jaeger, Carolyn O'Connor, Conor Fitzpatrick, Martina P Pasillas,[...]. Science 2017
554
18

Environment drives selection and function of enhancers controlling tissue-specific macrophage identities.
David Gosselin, Verena M Link, Casey E Romanoski, Gregory J Fonseca, Dawn Z Eichenfield, Nathanael J Spann, Joshua D Stender, Hyun B Chun, Hannah Garner, Frederic Geissmann,[...]. Cell 2014
795
18

The CSF-1 receptor ligands IL-34 and CSF-1 exhibit distinct developmental brain expression patterns and regulate neural progenitor cell maintenance and maturation.
Sayan Nandi, Solen Gokhan, Xu-Ming Dai, Suwen Wei, Grigori Enikolopov, Haishan Lin, Mark F Mehler, E Richard Stanley. Dev Biol 2012
210
18

Discovery of a cytokine and its receptor by functional screening of the extracellular proteome.
Haishan Lin, Ernestine Lee, Kevin Hestir, Cindy Leo, Minmei Huang, Elizabeth Bosch, Robert Halenbeck, Ge Wu, Aileen Zhou, Dirk Behrens,[...]. Science 2008
510
18

Genetic Cell Ablation Reveals Clusters of Local Self-Renewing Microglia in the Mammalian Central Nervous System.
Julia Bruttger, Khalad Karram, Simone Wörtge, Tommy Regen, Federico Marini, Nicola Hoppmann, Matthias Klein, Thomas Blank, Simon Yona, Yochai Wolf,[...]. Immunity 2015
367
17

Fate mapping reveals origins and dynamics of monocytes and tissue macrophages under homeostasis.
Simon Yona, Ki-Wook Kim, Yochai Wolf, Alexander Mildner, Diana Varol, Michal Breker, Dalit Strauss-Ayali, Sergey Viukov, Martin Guilliams, Alexander Misharin,[...]. Immunity 2013
17

Tissue-resident macrophage enhancer landscapes are shaped by the local microenvironment.
Yonit Lavin, Deborah Winter, Ronnie Blecher-Gonen, Eyal David, Hadas Keren-Shaul, Miriam Merad, Steffen Jung, Ido Amit. Cell 2014
17

Emerging Roles for CSF-1 Receptor and its Ligands in the Nervous System.
Violeta Chitu, Şölen Gokhan, Sayan Nandi, Mark F Mehler, E Richard Stanley. Trends Neurosci 2016
172
17

Deficient neuron-microglia signaling results in impaired functional brain connectivity and social behavior.
Yang Zhan, Rosa C Paolicelli, Francesco Sforazzini, Laetitia Weinhard, Giulia Bolasco, Francesca Pagani, Alexei L Vyssotski, Angelo Bifone, Alessandro Gozzi, Davide Ragozzino,[...]. Nat Neurosci 2014
682
17

Repopulated microglia are solely derived from the proliferation of residual microglia after acute depletion.
Yubin Huang, Zhen Xu, Shanshan Xiong, Fangfang Sun, Guangrong Qin, Guanglei Hu, Jingjing Wang, Lei Zhao, Yu-Xiang Liang, Tianzhun Wu,[...]. Nat Neurosci 2018
221
17

Microglia Biology: One Century of Evolving Concepts.
Marco Prinz, Steffen Jung, Josef Priller. Cell 2019
356
17

Homozygous Mutations in CSF1R Cause a Pediatric-Onset Leukoencephalopathy and Can Result in Congenital Absence of Microglia.
Nynke Oosterhof, Irene J Chang, Ehsan Ghayoor Karimiani, Laura E Kuil, Dana M Jensen, Ray Daza, Erica Young, Lee Astle, Herma C van der Linde, Giridhar M Shivaram,[...]. Am J Hum Genet 2019
100
16

Human microglia regional heterogeneity and phenotypes determined by multiplexed single-cell mass cytometry.
Chotima Böttcher, Stephan Schlickeiser, Marjolein A M Sneeboer, Desiree Kunkel, Anniki Knop, Evdokia Paza, Pawel Fidzinski, Larissa Kraus, Gijsje J L Snijders, René S Kahn,[...]. Nat Neurosci 2019
171
16

Microglia shape adult hippocampal neurogenesis through apoptosis-coupled phagocytosis.
Amanda Sierra, Juan M Encinas, Juan J P Deudero, Jessica H Chancey, Grigori Enikolopov, Linda S Overstreet-Wadiche, Stella E Tsirka, Mirjana Maletic-Savatic. Cell Stem Cell 2010
939
16

Microglial interactions with synapses are modulated by visual experience.
Marie-Ève Tremblay, Rebecca L Lowery, Ania K Majewska. PLoS Biol 2010
907
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.