A citation-based method for searching scientific literature

Zhiqiang Deng, Junghyun Lim, Qian Wang, Kerry Purtell, Shuai Wu, Gloria M Palomo, Haiyan Tan, Giovanni Manfredi, Yanxiang Zhao, Junmin Peng, Bo Hu, Shi Chen, Zhenyu Yue. Autophagy 2020
Times Cited: 30







List of co-cited articles
530 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Haploinsufficiency of TBK1 causes familial ALS and fronto-temporal dementia.
Axel Freischmidt, Thomas Wieland, Benjamin Richter, Wolfgang Ruf, Veronique Schaeffer, Kathrin Müller, Nicolai Marroquin, Frida Nordin, Annemarie Hübers, Patrick Weydt,[...]. Nat Neurosci 2015
474
36

TBK-1 promotes autophagy-mediated antimicrobial defense by controlling autophagosome maturation.
Manohar Pilli, John Arko-Mensah, Marisa Ponpuak, Esteban Roberts, Sharon Master, Michael A Mandell, Nicolas Dupont, Wojciech Ornatowski, Shanya Jiang, Steven B Bradfute,[...]. Immunity 2012
395
30

SQSTM1 mutations in familial and sporadic amyotrophic lateral sclerosis.
Faisal Fecto, Jianhua Yan, S Pavan Vemula, Erdong Liu, Yi Yang, Wenjie Chen, Jian Guo Zheng, Yong Shi, Nailah Siddique, Hasan Arrat,[...]. Arch Neurol 2011
422
30

p62/SQSTM1 is a target gene for transcription factor NRF2 and creates a positive feedback loop by inducing antioxidant response element-driven gene transcription.
Ashish Jain, Trond Lamark, Eva Sjøttem, Kenneth Bowitz Larsen, Jane Atesoh Awuh, Aud Øvervatn, Michael McMahon, John D Hayes, Terje Johansen. J Biol Chem 2010
848
26

Exome sequencing in amyotrophic lateral sclerosis identifies risk genes and pathways.
Elizabeth T Cirulli, Brittany N Lasseigne, Slavé Petrovski, Peter C Sapp, Patrick A Dion, Claire S Leblond, Julien Couthouis, Yi-Fan Lu, Quanli Wang, Brian J Krueger,[...]. Science 2015
572
26

Loss of autophagy in the central nervous system causes neurodegeneration in mice.
Masaaki Komatsu, Satoshi Waguri, Tomoki Chiba, Shigeo Murata, Jun-ichi Iwata, Isei Tanida, Takashi Ueno, Masato Koike, Yasuo Uchiyama, Eiki Kominami,[...]. Nature 2006
23

Phosphorylation of the autophagy receptor optineurin restricts Salmonella growth.
Philipp Wild, Hesso Farhan, David G McEwan, Sebastian Wagner, Vladimir V Rogov, Nathan R Brady, Benjamin Richter, Jelena Korac, Oliver Waidmann, Chunaram Choudhary,[...]. Science 2011
838
23

Suppression of basal autophagy in neural cells causes neurodegenerative disease in mice.
Taichi Hara, Kenji Nakamura, Makoto Matsui, Akitsugu Yamamoto, Yohko Nakahara, Rika Suzuki-Migishima, Minesuke Yokoyama, Kenji Mishima, Ichiro Saito, Hideyuki Okano,[...]. Nature 2006
23

Ubiquitinated TDP-43 in frontotemporal lobar degeneration and amyotrophic lateral sclerosis.
Manuela Neumann, Deepak M Sampathu, Linda K Kwong, Adam C Truax, Matthew C Micsenyi, Thomas T Chou, Jennifer Bruce, Theresa Schuck, Murray Grossman, Christopher M Clark,[...]. Science 2006
23

TBK1 controls autophagosomal engulfment of polyubiquitinated mitochondria through p62/SQSTM1 phosphorylation.
Gen Matsumoto, Tomomi Shimogori, Nobutaka Hattori, Nobuyuki Nukina. Hum Mol Genet 2015
163
23

Phosphorylation of p62 activates the Keap1-Nrf2 pathway during selective autophagy.
Yoshinobu Ichimura, Satoshi Waguri, Yu-Shin Sou, Shun Kageyama, Jun Hasegawa, Ryosuke Ishimura, Tetsuya Saito, Yinjie Yang, Tsuguka Kouno, Toshiaki Fukutomi,[...]. Mol Cell 2013
570
23

Autophagy Receptors and Neurodegenerative Diseases.
Zhiqiang Deng, Kerry Purtell, Veronik Lachance, Mitchell S Wold, Shi Chen, Zhenyu Yue. Trends Cell Biol 2017
106
20

SQSTM1 mutations in frontotemporal lobar degeneration and amyotrophic lateral sclerosis.
Elisa Rubino, Innocenzo Rainero, Adriano Chiò, Ekaterina Rogaeva, Daniela Galimberti, Pierpaola Fenoglio, Yakov Grinberg, Giancarlo Isaia, Andrea Calvo, Salvatore Gentile,[...]. Neurology 2012
196
20

p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagy.
Serhiy Pankiv, Terje Høyvarde Clausen, Trond Lamark, Andreas Brech, Jack-Ansgar Bruun, Heidi Outzen, Aud Øvervatn, Geir Bjørkøy, Terje Johansen. J Biol Chem 2007
20

A hexanucleotide repeat expansion in C9ORF72 is the cause of chromosome 9p21-linked ALS-FTD.
Alan E Renton, Elisa Majounie, Adrian Waite, Javier Simón-Sánchez, Sara Rollinson, J Raphael Gibbs, Jennifer C Schymick, Hannu Laaksovirta, John C van Swieten, Liisa Myllykangas,[...]. Neuron 2011
20

Serine 403 phosphorylation of p62/SQSTM1 regulates selective autophagic clearance of ubiquitinated proteins.
Gen Matsumoto, Koji Wada, Misako Okuno, Masaru Kurosawa, Nobuyuki Nukina. Mol Cell 2011
410
20

Phosphorylation of OPTN by TBK1 enhances its binding to Ub chains and promotes selective autophagy of damaged mitochondria.
Benjamin Richter, Danielle A Sliter, Lina Herhaus, Alexandra Stolz, Chunxin Wang, Petra Beli, Gabriele Zaffagnini, Philipp Wild, Sascha Martens, Sebastian A Wagner,[...]. Proc Natl Acad Sci U S A 2016
355
20

Impaired antioxydative Keap1/Nrf2 system and the downstream stress protein responses in the motor neuron of ALS model mice.
Takafumi Mimoto, Kazunori Miyazaki, Nobutoshi Morimoto, Tomoko Kurata, Kota Satoh, Yoshio Ikeda, Koji Abe. Brain Res 2012
30
20

Extensive involvement of autophagy in Alzheimer disease: an immuno-electron microscopy study.
Ralph A Nixon, Jerzy Wegiel, Asok Kumar, Wai Haung Yu, Corrinne Peterhoff, Anne Cataldo, Ana Maria Cuervo. J Neuropathol Exp Neurol 2005
984
20


TBK1: a new player in ALS linking autophagy and neuroinflammation.
James A Oakes, Maria C Davies, Mark O Collins. Mol Brain 2017
129
16

Decoding ALS: from genes to mechanism.
J Paul Taylor, Robert H Brown, Don W Cleveland. Nature 2016
903
16

Mechanism and medical implications of mammalian autophagy.
Ivan Dikic, Zvulun Elazar. Nat Rev Mol Cell Biol 2018
893
16


Proteotoxic stress induces phosphorylation of p62/SQSTM1 by ULK1 to regulate selective autophagic clearance of protein aggregates.
Junghyun Lim, M Lenard Lachenmayer, Shuai Wu, Wenchao Liu, Mondira Kundu, Rong Wang, Masaaki Komatsu, Young J Oh, Yanxiang Zhao, Zhenyu Yue. PLoS Genet 2015
154
16

Systemic overexpression of SQSTM1/p62 accelerates disease onset in a SOD1H46R-expressing ALS mouse model.
Shun Mitsui, Asako Otomo, Masahisa Nozaki, Suzuka Ono, Kai Sato, Ryohei Shirakawa, Hiroaki Adachi, Masashi Aoki, Gen Sobue, Hui-Fang Shang,[...]. Mol Brain 2018
19
26

Expanded GGGGCC hexanucleotide repeat in noncoding region of C9ORF72 causes chromosome 9p-linked FTD and ALS.
Mariely DeJesus-Hernandez, Ian R Mackenzie, Bradley F Boeve, Adam L Boxer, Matt Baker, Nicola J Rutherford, Alexandra M Nicholson, NiCole A Finch, Heather Flynn, Jennifer Adamson,[...]. Neuron 2011
16


ALS-associated missense and nonsense TBK1 mutations can both cause loss of kinase function.
Martina de Majo, Simon D Topp, Bradley N Smith, Agnes L Nishimura, Han-Jou Chen, Athina Soragia Gkazi, Jack Miller, Chun Hao Wong, Caroline Vance, Frank Baas,[...]. Neurobiol Aging 2018
40
16

Mutations of optineurin in amyotrophic lateral sclerosis.
Hirofumi Maruyama, Hiroyuki Morino, Hidefumi Ito, Yuishin Izumi, Hidemasa Kato, Yasuhito Watanabe, Yoshimi Kinoshita, Masaki Kamada, Hiroyuki Nodera, Hidenori Suzuki,[...]. Nature 2010
844
16

Defective recognition of LC3B by mutant SQSTM1/p62 implicates impairment of autophagy as a pathogenic mechanism in ALS-FTLD.
Alice Goode, Kevin Butler, Jed Long, James Cavey, Daniel Scott, Barry Shaw, Jill Sollenberger, Christopher Gell, Terje Johansen, Neil J Oldham,[...]. Autophagy 2016
80
16

SQSTM1 mutations--bridging Paget disease of bone and ALS/FTLD.
Sarah L Rea, Veronika Majcher, Mark S Searle, Rob Layfield. Exp Cell Res 2014
94
16

ALS-FTLD associated mutations of SQSTM1 impact on Keap1-Nrf2 signalling.
Alice Goode, Sarah Rea, Melanie Sultana, Barry Shaw, Mark S Searle, Robert Layfield. Mol Cell Neurosci 2016
32
16


XBP-1 deficiency in the nervous system protects against amyotrophic lateral sclerosis by increasing autophagy.
Claudio Hetz, Peter Thielen, Soledad Matus, Melissa Nassif, Felipe Court, Roberta Kiffin, Gabriela Martinez, Ana María Cuervo, Robert H Brown, Laurie H Glimcher. Genes Dev 2009
389
13


Sequestosome 1/p62 links familial ALS mutant SOD1 to LC3 via an ubiquitin-independent mechanism.
Jozsef Gal, Anna-Lena Ström, David M Kwinter, Renée Kilty, Jiayu Zhang, Ping Shi, Weisi Fu, Marie W Wooten, Haining Zhu. J Neurochem 2009
135
13

Loss of C9ORF72 impairs autophagy and synergizes with polyQ Ataxin-2 to induce motor neuron dysfunction and cell death.
Chantal Sellier, Maria-Letizia Campanari, Camille Julie Corbier, Angeline Gaucherot, Isabelle Kolb-Cheynel, Mustapha Oulad-Abdelghani, Frank Ruffenach, Adeline Page, Sorana Ciura, Edor Kabashi,[...]. EMBO J 2016
233
13

The C9orf72 protein interacts with Rab1a and the ULK1 complex to regulate initiation of autophagy.
Christopher P Webster, Emma F Smith, Claudia S Bauer, Annekathrin Moller, Guillaume M Hautbergue, Laura Ferraiuolo, Monika A Myszczynska, Adrian Higginbottom, Matthew J Walsh, Alexander J Whitworth,[...]. EMBO J 2016
213
13

Endolysosomal Deficits Augment Mitochondria Pathology in Spinal Motor Neurons of Asymptomatic fALS Mice.
Yuxiang Xie, Bing Zhou, Mei-Yao Lin, Shiwei Wang, Kevin D Foust, Zu-Hang Sheng. Neuron 2015
101
13



Recurrent mutation of the gene encoding sequestosome 1 (SQSTM1/p62) in Paget disease of bone.
Nancy Laurin, Jacques P Brown, Jean Morissette, Vincent Raymond. Am J Hum Genet 2002
378
13

Autophagy as a common pathway in amyotrophic lateral sclerosis.
Dao K H Nguyen, Ravi Thombre, Jiou Wang. Neurosci Lett 2019
50
13

The C9orf72 repeat expansion disrupts nucleocytoplasmic transport.
Ke Zhang, Christopher J Donnelly, Aaron R Haeusler, Jonathan C Grima, James B Machamer, Peter Steinwald, Elizabeth L Daley, Sean J Miller, Kathleen M Cunningham, Svetlana Vidensky,[...]. Nature 2015
566
13

Human C9ORF72 Hexanucleotide Expansion Reproduces RNA Foci and Dipeptide Repeat Proteins but Not Neurodegeneration in BAC Transgenic Mice.
Owen M Peters, Gabriela Toro Cabrera, Helene Tran, Tania F Gendron, Jeanne E McKeon, Jake Metterville, Alexandra Weiss, Nicholas Wightman, Johnny Salameh, Juyhun Kim,[...]. Neuron 2015
165
13

TDP-43 mutations in familial and sporadic amyotrophic lateral sclerosis.
Jemeen Sreedharan, Ian P Blair, Vineeta B Tripathi, Xun Hu, Caroline Vance, Boris Rogelj, Steven Ackerley, Jennifer C Durnall, Kelly L Williams, Emanuele Buratti,[...]. Science 2008
13


Nrf2 activation in astrocytes protects against neurodegeneration in mouse models of familial amyotrophic lateral sclerosis.
Marcelo R Vargas, Delinda A Johnson, Daniel W Sirkis, Albee Messing, Jeffrey A Johnson. J Neurosci 2008
302
13

Oxidative stress sensor Keap1 functions as an adaptor for Cul3-based E3 ligase to regulate proteasomal degradation of Nrf2.
Akira Kobayashi, Moon-Il Kang, Hiromi Okawa, Makiko Ohtsuji, Yukari Zenke, Tomoki Chiba, Kazuhiko Igarashi, Masayuki Yamamoto. Mol Cell Biol 2004
13


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.