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List of co-cited articles
163 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
35

Ketamine disinhibits dendrites and enhances calcium signals in prefrontal dendritic spines.
Farhan Ali, Danielle M Gerhard, Katherine Sweasy, Santosh Pothula, Christopher Pittenger, Ronald S Duman, Alex C Kwan. Nat Commun 2020
67
17

Sensitive red protein calcium indicators for imaging neural activity.
Hod Dana, Boaz Mohar, Yi Sun, Sujatha Narayan, Andrew Gordus, Jeremy P Hasseman, Getahun Tsegaye, Graham T Holt, Amy Hu, Deepika Walpita,[...]. Elife 2016
431
17

Imaging large-scale neural activity with cellular resolution in awake, mobile mice.
Daniel A Dombeck, Anton N Khabbaz, Forrest Collman, Thomas L Adelman, David W Tank. Neuron 2007
650
14

CaImAn an open source tool for scalable calcium imaging data analysis.
Andrea Giovannucci, Johannes Friedrich, Pat Gunn, Jérémie Kalfon, Brandon L Brown, Sue Ann Koay, Jiannis Taxidis, Farzaneh Najafi, Jeffrey L Gauthier, Pengcheng Zhou,[...]. Elife 2019
178
14

Fast nonnegative deconvolution for spike train inference from population calcium imaging.
Joshua T Vogelstein, Adam M Packer, Timothy A Machado, Tanya Sippy, Baktash Babadi, Rafael Yuste, Liam Paninski. J Neurophysiol 2010
223
14

Compartmentalization of GABAergic inhibition by dendritic spines.
Chiayu Q Chiu, Gyorgy Lur, Thomas M Morse, Nicholas T Carnevale, Graham C R Ellis-Davies, Michael J Higley. Science 2013
175
11

Imaging calcium in neurons.
Christine Grienberger, Arthur Konnerth. Neuron 2012
639
11


Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data.
Eftychios A Pnevmatikakis, Daniel Soudry, Yuanjun Gao, Timothy A Machado, Josh Merel, David Pfau, Thomas Reardon, Yu Mu, Clay Lacefield, Weijian Yang,[...]. Neuron 2016
386
11

SIMA: Python software for analysis of dynamic fluorescence imaging data.
Patrick Kaifosh, Jeffrey D Zaremba, Nathan B Danielson, Attila Losonczy. Front Neuroinform 2014
97
11

A comparison of neuronal population dynamics measured with calcium imaging and electrophysiology.
Ziqiang Wei, Bei-Jung Lin, Tsai-Wen Chen, Kayvon Daie, Karel Svoboda, Shaul Druckmann. PLoS Comput Biol 2020
33
12

Benchmarking Spike Rate Inference in Population Calcium Imaging.
Lucas Theis, Philipp Berens, Emmanouil Froudarakis, Jacob Reimer, Miroslav Román Rosón, Tom Baden, Thomas Euler, Andreas S Tolias, Matthias Bethge. Neuron 2016
83
11


Inference of neuronal network spike dynamics and topology from calcium imaging data.
Henry Lütcke, Felipe Gerhard, Friedemann Zenke, Wulfram Gerstner, Fritjof Helmchen. Front Neural Circuits 2013
48
8


NoRMCorre: An online algorithm for piecewise rigid motion correction of calcium imaging data.
Eftychios A Pnevmatikakis, Andrea Giovannucci. J Neurosci Methods 2017
223
8

A resource of Cre driver lines for genetic targeting of GABAergic neurons in cerebral cortex.
Hiroki Taniguchi, Miao He, Priscilla Wu, Sangyong Kim, Raehum Paik, Ken Sugino, Duda Kvitsiani, Yu Fu, Jiangteng Lu, Ying Lin,[...]. Neuron 2011
8

GABAergic Interneurons in the Neocortex: From Cellular Properties to Circuits.
Robin Tremblay, Soohyun Lee, Bernardo Rudy. Neuron 2016
729
8


Activity in motor-sensory projections reveals distributed coding in somatosensation.
Leopoldo Petreanu, Diego A Gutnisky, Daniel Huber, Ning-long Xu, Dan H O'Connor, Lin Tian, Loren Looger, Karel Svoboda. Nature 2012
212
8

Voltage imaging with genetically encoded indicators.
Yongxian Xu, Peng Zou, Adam E Cohen. Curr Opin Chem Biol 2017
88
8

Longitudinal Effects of Ketamine on Dendritic Architecture In Vivo in the Mouse Medial Frontal Cortex.
Victoria Phoumthipphavong, Florent Barthas, Samantha Hassett, Alex C Kwan. eNeuro 2016
58
8

Sustained rescue of prefrontal circuit dysfunction by antidepressant-induced spine formation.
R N Moda-Sava, M H Murdock, P K Parekh, R N Fetcho, B S Huang, T N Huynh, J Witztum, D C Shaver, D L Rosenthal, E J Alway,[...]. Science 2019
218
8

Inhibitory regulation of calcium transients in prefrontal dendritic spines is compromised by a nonsense Shank3 mutation.
Farhan Ali, Ling-Xiao Shao, Danielle M Gerhard, Katherine Sweasy, Santosh Pothula, Christopher Pittenger, Ronald S Duman, Alex C Kwan. Mol Psychiatry 2021
7
42

mTOR-dependent synapse formation underlies the rapid antidepressant effects of NMDA antagonists.
Nanxin Li, Boyoung Lee, Rong-Jian Liu, Mounira Banasr, Jason M Dwyer, Masaaki Iwata, Xiao-Yuan Li, George Aghajanian, Ronald S Duman. Science 2010
8

High-performance calcium sensors for imaging activity in neuronal populations and microcompartments.
Hod Dana, Yi Sun, Boaz Mohar, Brad K Hulse, Aaron M Kerlin, Jeremy P Hasseman, Getahun Tsegaye, Arthur Tsang, Allan Wong, Ronak Patel,[...]. Nat Methods 2019
307
8

A motor cortex circuit for motor planning and movement.
Nuo Li, Tsai-Wen Chen, Zengcai V Guo, Charles R Gerfen, Karel Svoboda. Nature 2015
256
8

A Suite of Transgenic Driver and Reporter Mouse Lines with Enhanced Brain-Cell-Type Targeting and Functionality.
Tanya L Daigle, Linda Madisen, Travis A Hage, Matthew T Valley, Ulf Knoblich, Rylan S Larsen, Marc M Takeno, Lawrence Huang, Hong Gu, Rachael Larsen,[...]. Cell 2018
235
8

Rational Engineering of XCaMPs, a Multicolor GECI Suite for In Vivo Imaging of Complex Brain Circuit Dynamics.
Masatoshi Inoue, Atsuya Takeuchi, Satoshi Manita, Shin-Ichiro Horigane, Masayuki Sakamoto, Ryosuke Kawakami, Kazushi Yamaguchi, Kouhei Otomo, Hiroyuki Yokoyama, Ryang Kim,[...]. Cell 2019
99
8

Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators.
Lin Tian, S Andrew Hires, Tianyi Mao, Daniel Huber, M Eugenia Chiappe, Sreekanth H Chalasani, Leopoldo Petreanu, Jasper Akerboom, Sean A McKinney, Eric R Schreiter,[...]. Nat Methods 2009
8

Genetically encoded indicators of neuronal activity.
Michael Z Lin, Mark J Schnitzer. Nat Neurosci 2016
315
8

Robustness of Spike Deconvolution for Neuronal Calcium Imaging.
Marius Pachitariu, Carsen Stringer, Kenneth D Harris. J Neurosci 2018
55
8

Accurate spike estimation from noisy calcium signals for ultrafast three-dimensional imaging of large neuronal populations in vivo.
Thomas Deneux, Attila Kaszas, Gergely Szalay, Gergely Katona, Tamás Lakner, Amiram Grinvald, Balázs Rózsa, Ivo Vanzetta. Nat Commun 2016
88
8

Community-based benchmarking improves spike rate inference from two-photon calcium imaging data.
Philipp Berens, Jeremy Freeman, Thomas Deneux, Nikolay Chenkov, Thomas McColgan, Artur Speiser, Jakob H Macke, Srinivas C Turaga, Patrick Mineault, Peter Rupprecht,[...]. PLoS Comput Biol 2018
51
8


Projections from the brain to the spinal cord in the mouse.
Huazheng Liang, George Paxinos, Charles Watson. Brain Struct Funct 2011
61
5

A Cre-dependent GCaMP3 reporter mouse for neuronal imaging in vivo.
Hatim A Zariwala, Bart G Borghuis, Tycho M Hoogland, Linda Madisen, Lin Tian, Chris I De Zeeuw, Hongkui Zeng, Loren L Looger, Karel Svoboda, Tsai-Wen Chen. J Neurosci 2012
255
5

Ca(2+) signaling in dendritic spines.
B L Sabatini, M Maravall, K Svoboda. Curr Opin Neurobiol 2001
178
5

Ultrastructural, Molecular and Functional Mapping of GABAergic Synapses on Dendritic Spines and Shafts of Neocortical Pyramidal Neurons.
Taekyung Kwon, Angel Merchán-Pérez, Emiliano M Rial Verde, José-Rodrigo Rodríguez, Javier DeFelipe, Rafael Yuste. Cereb Cortex 2019
19
10

Biochemical Computation for Spine Structural Plasticity.
Jun Nishiyama, Ryohei Yasuda. Neuron 2015
116
5

Layer-specific modulation of neocortical dendritic inhibition during active wakefulness.
William Muñoz, Robin Tremblay, Daniel Levenstein, Bernardo Rudy. Science 2017
156
5


Calcium signaling in dendritic spines.
Michael J Higley, Bernardo L Sabatini. Cold Spring Harb Perspect Biol 2012
103
5

Unique functional properties of somatostatin-expressing GABAergic neurons in mouse barrel cortex.
Luc J Gentet, Yves Kremer, Hiroki Taniguchi, Z Josh Huang, Jochen F Staiger, Carl C H Petersen. Nat Neurosci 2012
297
5

How inhibition shapes cortical activity.
Jeffry S Isaacson, Massimo Scanziani. Neuron 2011
892
5

Fast and slow transitions in frontal ensemble activity during flexible sensorimotor behavior.
Michael J Siniscalchi, Victoria Phoumthipphavong, Farhan Ali, Marc Lozano, Alex C Kwan. Nat Neurosci 2016
51
5

ScanImage: flexible software for operating laser scanning microscopes.
Thomas A Pologruto, Bernardo L Sabatini, Karel Svoboda. Biomed Eng Online 2003
747
5

High-speed in vivo calcium imaging reveals neuronal network activity with near-millisecond precision.
Benjamin F Grewe, Dominik Langer, Hansjörg Kasper, Björn M Kampa, Fritjof Helmchen. Nat Methods 2010
288
5

Genetic voltage indicators.
Yuki Bando, Christiane Grimm, Victor H Cornejo, Rafael Yuste. BMC Biol 2019
49
5


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.