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In planta gene targeting can be enhanced by the use of CRISPR/Cas12a.
Felix Wolter, Holger Puchta. Plant J 2019
Times Cited: 44






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List of co-cited articles
551 articles co-cited >1



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  Times     Co-cited
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Cpf1 is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system.
Bernd Zetsche, Jonathan S Gootenberg, Omar O Abudayyeh, Ian M Slaymaker, Kira S Makarova, Patrick Essletzbichler, Sara E Volz, Julia Joung, John van der Oost, Aviv Regev,[...]. Cell 2015
2165
23
52

Efficient in planta gene targeting in Arabidopsis using egg cell-specific expression of the Cas9 nuclease of Staphylococcus aureus.
Felix Wolter, Jeannette Klemm, Holger Puchta. Plant J 2018
73
22
50

In planta gene targeting.
Friedrich Fauser, Nadine Roth, Michael Pacher, Gabriele Ilg, Rocío Sánchez-Fernández, Christian Biesgen, Holger Puchta. Proc Natl Acad Sci U S A 2012
127
21
47

CRISPR/Cas9-mediated gene targeting in Arabidopsis using sequential transformation.
Daisuke Miki, Wenxin Zhang, Wenjie Zeng, Zhengyan Feng, Jian-Kang Zhu. Nat Commun 2018
104
20
45

Application of CRISPR-Cas12a temperature sensitivity for improved genome editing in rice, maize, and Arabidopsis.
Aimee A Malzahn, Xu Tang, Keunsub Lee, Qiurong Ren, Simon Sretenovic, Yingxiao Zhang, Hongqiao Chen, Minjeong Kang, Yu Bao, Xuelian Zheng,[...]. BMC Biol 2019
91
20
45

Engineering CRISPR/LbCas12a for highly efficient, temperature-tolerant plant gene editing.
Patrick Schindele, Holger Puchta. Plant Biotechnol J 2020
49
19
43

DNA replicons for plant genome engineering.
Nicholas J Baltes, Javier Gil-Humanes, Tomas Cermak, Paul A Atkins, Daniel F Voytas. Plant Cell 2014
267
18
40

A CRISPR-Cpf1 system for efficient genome editing and transcriptional repression in plants.
Xu Tang, Levi G Lowder, Tao Zhang, Aimee A Malzahn, Xuelian Zheng, Daniel F Voytas, Zhaohui Zhong, Yiyi Chen, Qiurong Ren, Qian Li,[...]. Nat Plants 2017
261
18
40

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
8023
17
38

CRISPR-Cas12a enables efficient biallelic gene targeting in rice.
Shaoya Li, Yingxiao Zhang, Lanqin Xia, Yiping Qi. Plant Biotechnol J 2020
27
17
62

Precise gene replacement in rice by RNA transcript-templated homologous recombination.
Shaoya Li, Jingying Li, Yubing He, Meilian Xu, Jiahui Zhang, Wenming Du, Yunde Zhao, Lanqin Xia. Nat Biotechnol 2019
60
16
36

Precise insertion and guided editing of higher plant genomes using Cpf1 CRISPR nucleases.
Matthew B Begemann, Benjamin N Gray, Emma January, Gina C Gordon, Yonghua He, Haijun Liu, Xingrong Wu, Thomas P Brutnell, Todd C Mockler, Mohammed Oufattole. Sci Rep 2017
99
16
36

Biallelic Gene Targeting in Rice.
Masaki Endo, Masafumi Mikami, Seiichi Toki. Plant Physiol 2016
94
15
34

Search-and-replace genome editing without double-strand breaks or donor DNA.
Andrew V Anzalone, Peyton B Randolph, Jessie R Davis, Alexander A Sousa, Luke W Koblan, Jonathan M Levy, Peter J Chen, Christopher Wilson, Gregory A Newby, Aditya Raguram,[...]. Nature 2019
1320
15
34

Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage.
Alexis C Komor, Yongjoo B Kim, Michael S Packer, John A Zuris, David R Liu. Nature 2016
2163
15
34

Highly efficient homology-directed repair using CRISPR/Cpf1-geminiviral replicon in tomato.
Tien Van Vu, Velu Sivankalyani, Eun-Jung Kim, Duong Thi Hai Doan, Mil Thi Tran, Jihae Kim, Yeon Woo Sung, Minwoo Park, Yang Jae Kang, Jae-Yean Kim. Plant Biotechnol J 2020
57
15
34

Homology-Directed Repair of a Defective Glabrous Gene in Arabidopsis With Cas9-Based Gene Targeting.
Florian Hahn, Marion Eisenhut, Otho Mantegazza, Andreas P M Weber. Front Plant Sci 2018
38
14
36

The CRISPR/Cas system can be used as nuclease for in planta gene targeting and as paired nickases for directed mutagenesis in Arabidopsis resulting in heritable progeny.
Simon Schiml, Friedrich Fauser, Holger Puchta. Plant J 2014
195
14
31

High-efficiency gene targeting in hexaploid wheat using DNA replicons and CRISPR/Cas9.
Javier Gil-Humanes, Yanpeng Wang, Zhen Liang, Qiwei Shan, Carmen V Ozuna, Susana Sánchez-León, Nicholas J Baltes, Colby Starker, Francisco Barro, Caixia Gao,[...]. Plant J 2017
170
14
31

High-frequency, precise modification of the tomato genome.
Tomáš Čermák, Nicholas J Baltes, Radim Čegan, Yong Zhang, Daniel F Voytas. Genome Biol 2015
275
14
31

Enhancing in planta gene targeting efficiencies in Arabidopsis using temperature-tolerant CRISPR/LbCas12a.
Laura Merker, Patrick Schindele, Teng-Kuei Huang, Felix Wolter, Holger Puchta. Plant Biotechnol J 2020
21
14
66

Efficient in planta gene targeting in tomato using geminiviral replicons and the CRISPR/Cas9 system.
Tal Dahan-Meir, Shdema Filler-Hayut, Cathy Melamed-Bessudo, Samuel Bocobza, Henryk Czosnek, Asaph Aharoni, Avraham A Levy. Plant J 2018
100
13
29

Assessment of Cas12a-mediated gene editing efficiency in plants.
Joan Miquel Bernabé-Orts, Iván Casas-Rodrigo, Eugenio G Minguet, Viola Landolfi, Victor Garcia-Carpintero, Silvia Gianoglio, Marta Vázquez-Vilar, Antonio Granell, Diego Orzaez. Plant Biotechnol J 2019
55
13
29

Targeted Mutagenesis, Precise Gene Editing, and Site-Specific Gene Insertion in Maize Using Cas9 and Guide RNA.
Sergei Svitashev, Joshua K Young, Christine Schwartz, Huirong Gao, S Carl Falco, A Mark Cigan. Plant Physiol 2015
319
13
29

True gene-targeting events by CRISPR/Cas-induced DSB repair of the PPO locus with an ectopically integrated repair template.
Sylvia de Pater, Bart J P M Klemann, Paul J J Hooykaas. Sci Rep 2018
28
12
42

CRISPR/Cas-mediated gene targeting in plants: finally a turn for the better for homologous recombination.
Teng-Kuei Huang, Holger Puchta. Plant Cell Rep 2019
65
12
27

Gene Targeting by Homology-Directed Repair in Rice Using a Geminivirus-Based CRISPR/Cas9 System.
Mugui Wang, Yuming Lu, José Ramón Botella, Yanfei Mao, Kai Hua, Jian-Kang Zhu. Mol Plant 2017
105
12
27

Prime genome editing in rice and wheat.
Qiupeng Lin, Yuan Zong, Chenxiao Xue, Shengxing Wang, Shuai Jin, Zixu Zhu, Yanpeng Wang, Andrew V Anzalone, Aditya Raguram, Jordan L Doman,[...]. Nat Biotechnol 2020
260
12
27

Fusion of the Cas9 endonuclease and the VirD2 relaxase facilitates homology-directed repair for precise genome engineering in rice.
Zahir Ali, Ashwag Shami, Khalid Sedeek, Radwa Kamel, Abdulrahman Alhabsi, Muhammad Tehseen, Norhan Hassan, Haroon Butt, Ahad Kababji, Samir M Hamdan,[...]. Commun Biol 2020
43
12
27

Highly efficient heritable plant genome engineering using Cas9 orthologues from Streptococcus thermophilus and Staphylococcus aureus.
Jeannette Steinert, Simon Schiml, Friedrich Fauser, Holger Puchta. Plant J 2015
140
11
25

Activities and specificities of CRISPR/Cas9 and Cas12a nucleases for targeted mutagenesis in maize.
Keunsub Lee, Yingxiao Zhang, Benjamin P Kleinstiver, Jimmy A Guo, Martin J Aryee, Jonah Miller, Aimee Malzahn, Scott Zarecor, Carolyn J Lawrence-Dill, J Keith Joung,[...]. Plant Biotechnol J 2019
101
11
25

Plant Genome Editing Using FnCpf1 and LbCpf1 Nucleases at Redefined and Altered PAM Sites.
Zhaohui Zhong, Yingxiao Zhang, Qi You, Xu Tang, Qiurong Ren, Shishi Liu, Lijia Yang, Yan Wang, Xiaopei Liu, Binglin Liu,[...]. Mol Plant 2018
71
11
25

The repair of double-strand breaks in plants: mechanisms and consequences for genome evolution.
Holger Puchta. J Exp Bot 2005
341
11
25

Increasing frequencies of site-specific mutagenesis and gene targeting in Arabidopsis by manipulating DNA repair pathways.
Yiping Qi, Yong Zhang, Feng Zhang, Joshua A Baller, Spencer C Cleland, Yungil Ryu, Colby G Starker, Daniel F Voytas. Genome Res 2013
105
11
25

CRISPR/Cpf1-mediated DNA-free plant genome editing.
Hyeran Kim, Sang-Tae Kim, Jahee Ryu, Beum-Chang Kang, Jin-Soo Kim, Sang-Gyu Kim. Nat Commun 2017
234
11
25

Two different but related mechanisms are used in plants for the repair of genomic double-strand breaks by homologous recombination.
H Puchta, B Dujon, B Hohn. Proc Natl Acad Sci U S A 1996
257
11
25

Targeted genome modification of crop plants using a CRISPR-Cas system.
Qiwei Shan, Yanpeng Wang, Jun Li, Yi Zhang, Kunling Chen, Zhen Liang, Kang Zhang, Jinxing Liu, Jianzhong Jeff Xi, Jin-Long Qiu,[...]. Nat Biotechnol 2013
938
10
22

Engineered CRISPR-Cas12a variants with increased activities and improved targeting ranges for gene, epigenetic and base editing.
Benjamin P Kleinstiver, Alexander A Sousa, Russell T Walton, Y Esther Tak, Jonathan Y Hsu, Kendell Clement, Moira M Welch, Joy E Horng, Jose Malagon-Lopez, Irene Scarfò,[...]. Nat Biotechnol 2019
243
10
22

Engineering Herbicide-Resistant Rice Plants through CRISPR/Cas9-Mediated Homologous Recombination of Acetolactate Synthase.
Yongwei Sun, Xin Zhang, Chuanyin Wu, Yubing He, Youzhi Ma, Han Hou, Xiuping Guo, Wenming Du, Yunde Zhao, Lanqin Xia. Mol Plant 2016
198
10
22

Synthesis-dependent repair of Cpf1-induced double strand DNA breaks enables targeted gene replacement in rice.
Shaoya Li, Jingying Li, Jiahui Zhang, Wenming Du, Jindong Fu, Suhas Sutar, Yunde Zhao, Lanqin Xia. J Exp Bot 2018
41
10
24

ARGOS8 variants generated by CRISPR-Cas9 improve maize grain yield under field drought stress conditions.
Jinrui Shi, Huirong Gao, Hongyu Wang, H Renee Lafitte, Rayeann L Archibald, Meizhu Yang, Salim M Hakimi, Hua Mo, Jeffrey E Habben. Plant Biotechnol J 2017
300
10
22

Multiplex Gene Editing in Rice Using the CRISPR-Cpf1 System.
Mugui Wang, Yanfei Mao, Yuming Lu, Xiaoping Tao, Jian-Kang Zhu. Mol Plant 2017
155
10
22

Genome editing in maize directed by CRISPR-Cas9 ribonucleoprotein complexes.
Sergei Svitashev, Christine Schwartz, Brian Lenderts, Joshua K Young, A Mark Cigan. Nat Commun 2016
320
10
22

Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage.
Nicole M Gaudelli, Alexis C Komor, Holly A Rees, Michael S Packer, Ahmed H Badran, David I Bryson, David R Liu. Nature 2017
1581
10
22

CRISPR-Cpf1 mediates efficient homology-directed repair and temperature-controlled genome editing.
Miguel A Moreno-Mateos, Juan P Fernandez, Romain Rouet, Charles E Vejnar, Maura A Lane, Emily Mis, Mustafa K Khokha, Jennifer A Doudna, Antonio J Giraldez. Nat Commun 2017
147
10
22

Targeted, efficient sequence insertion and replacement in rice.
Yuming Lu, Yifu Tian, Rundong Shen, Qi Yao, Mugui Wang, Mei Chen, Jinsong Dong, Tongen Zhang, Feng Li, Mingguang Lei,[...]. Nat Biotechnol 2020
59
10
22

Efficient induction of heritable inversions in plant genomes using the CRISPR/Cas system.
Carla Schmidt, Michael Pacher, Holger Puchta. Plant J 2019
47
9
20

Cytosine, but not adenine, base editors induce genome-wide off-target mutations in rice.
Shuai Jin, Yuan Zong, Qiang Gao, Zixu Zhu, Yanpeng Wang, Peng Qin, Chengzhi Liang, Daowen Wang, Jin-Long Qiu, Feng Zhang,[...]. Science 2019
311
9
20

A Multipurpose Toolkit to Enable Advanced Genome Engineering in Plants.
Tomáš Čermák, Shaun J Curtin, Javier Gil-Humanes, Radim Čegan, Thomas J Y Kono, Eva Konečná, Joseph J Belanto, Colby G Starker, Jade W Mathre, Rebecca L Greenstein,[...]. Plant Cell 2017
264
9
20

Egg cell-specific promoter-controlled CRISPR/Cas9 efficiently generates homozygous mutants for multiple target genes in Arabidopsis in a single generation.
Zhi-Ping Wang, Hui-Li Xing, Li Dong, Hai-Yan Zhang, Chun-Yan Han, Xue-Chen Wang, Qi-Jun Chen. Genome Biol 2015
489
9
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.

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