A citation-based method for searching scientific literature

Wenyan Xu, Riley M Boyd, Maya O Tree, Faris Samkari, Linlin Zhao. Proc Natl Acad Sci U S A 2019
Times Cited: 7







List of co-cited articles
71 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Selective mitochondrial DNA degradation following double-strand breaks.
Amandine Moretton, Frédéric Morel, Bertil Macao, Philippe Lachaume, Layal Ishak, Mathilde Lefebvre, Isabelle Garreau-Balandier, Patrick Vernet, Maria Falkenberg, Géraldine Farge. PLoS One 2017
53
57

Linear mitochondrial DNA is rapidly degraded by components of the replication machinery.
Viktoriya Peeva, Daniel Blei, Genevieve Trombly, Sarah Corsi, Maciej J Szukszto, Pedro Rebelo-Guiomar, Payam A Gammage, Alexei P Kudin, Christian Becker, Janine Altmüller,[...]. Nat Commun 2018
60
57

The mitochondrial transcription factor A functions in mitochondrial base excision repair.
Chandrika Canugovi, Scott Maynard, Anne-Cécile V Bayne, Peter Sykora, Jingyan Tian, Nadja C de Souza-Pinto, Deborah L Croteau, Vilhelm A Bohr. DNA Repair (Amst) 2010
89
42

Maintenance and Expression of Mammalian Mitochondrial DNA.
Claes M Gustafsson, Maria Falkenberg, Nils-Göran Larsson. Annu Rev Biochem 2016
243
42

Base-excision repair deficiency alone or combined with increased oxidative stress does not increase mtDNA point mutations in mice.
Johanna H K Kauppila, Nina A Bonekamp, Arnaud Mourier, Marita A Isokallio, Alexandra Just, Timo E S Kauppila, James B Stewart, Nils-Göran Larsson. Nucleic Acids Res 2018
27
42


Linear mtDNA fragments and unusual mtDNA rearrangements associated with pathological deficiency of MGME1 exonuclease.
Thomas J Nicholls, Gábor Zsurka, Viktoriya Peeva, Susanne Schöler, Roman J Szczesny, Dominik Cysewski, Aurelio Reyes, Cornelia Kornblum, Monica Sciacco, Maurizio Moggio,[...]. Hum Mol Genet 2014
38
42

Mice lacking the mitochondrial exonuclease MGME1 accumulate mtDNA deletions without developing progeria.
Stanka Matic, Min Jiang, Thomas J Nicholls, Jay P Uhler, Caren Dirksen-Schwanenland, Paola Loguercio Polosa, Marie-Lune Simard, Xinping Li, Ilian Atanassov, Oliver Rackham,[...]. Nat Commun 2018
23
42

Oxidative stress induces degradation of mitochondrial DNA.
Inna Shokolenko, Natalia Venediktova, Alexandra Bochkareva, Glenn L Wilson, Mikhail F Alexeyev. Nucleic Acids Res 2009
275
42


Identification and characterization of mitochondrial abasic (AP)-endonuclease in mammalian cells.
Ranajoy Chattopadhyay, Lee Wiederhold, Bartosz Szczesny, Istvan Boldogh, Tapas K Hazra, Tadahide Izumi, Sankar Mitra. Nucleic Acids Res 2006
108
28


Mitochondrial DNA exhibits resistance to induced point and deletion mutations.
William J Valente, Nolan G Ericson, Alexandra S Long, Paul A White, Francesco Marchetti, Jason H Bielas. Nucleic Acids Res 2016
25
28

Structural insights into DNA degradation by human mitochondrial nuclease MGME1.
Chun Yang, Ruiqi Wu, Hehua Liu, Yiqing Chen, Yanqing Gao, Xi Chen, Yangyang Li, Jinbiao Ma, Jixi Li, Jianhua Gan. Nucleic Acids Res 2018
6
33

The maintenance of mitochondrial DNA integrity--critical analysis and update.
Mikhail Alexeyev, Inna Shokolenko, Glenn Wilson, Susan LeDoux. Cold Spring Harb Perspect Biol 2013
233
28

Human mitochondrial DNA deletions associated with mutations in the gene encoding Twinkle, a phage T7 gene 4-like protein localized in mitochondria.
J N Spelbrink, F Y Li, V Tiranti, K Nikali, Q P Yuan, M Tariq, S Wanrooij, N Garrido, G Comi, L Morandi,[...]. Nat Genet 2001
601
28


Oxidants and not alkylating agents induce rapid mtDNA loss and mitochondrial dysfunction.
Amy M Furda, Adele M Marrangoni, Anna Lokshin, Bennett Van Houten. DNA Repair (Amst) 2012
59
28

Loss-of-function mutations in MGME1 impair mtDNA replication and cause multisystemic mitochondrial disease.
Cornelia Kornblum, Thomas J Nicholls, Tobias B Haack, Susanne Schöler, Viktoriya Peeva, Katharina Danhauser, Kerstin Hallmann, Gábor Zsurka, Joanna Rorbach, Arcangela Iuso,[...]. Nat Genet 2013
128
28

Known Unknowns of Mammalian Mitochondrial DNA Maintenance.
Jaakko L O Pohjoismäki, Josefin M E Forslund, Steffi Goffart, Rubén Torregrosa-Muñumer, Sjoerd Wanrooij. Bioessays 2018
9
28

DNA Polymerase Beta Participates in Mitochondrial DNA Repair.
P Sykora, S Kanno, M Akbari, T Kulikowicz, B A Baptiste, G S Leandro, H Lu, J Tian, A May, K A Becker,[...]. Mol Cell Biol 2017
49
28

The mitochondrial DNA polymerase gamma degrades linear DNA fragments precluding the formation of deletions.
Nadee Nissanka, Sandra R Bacman, Melanie J Plastini, Carlos T Moraes. Nat Commun 2018
41
28



Quantitative PCR-based measurement of nuclear and mitochondrial DNA damage and repair in mammalian cells.
Janine H Santos, Joel N Meyer, Bhaskar S Mandavilli, Bennett Van Houten. Methods Mol Biol 2006
218
28

Mre11 is expressed in mammalian mitochondria where it binds to mitochondrial DNA.
Natalia I Dmitrieva, Daniela Malide, Maurice B Burg. Am J Physiol Regul Integr Comp Physiol 2011
27
28

Mitochondrial DNA repair and damage tolerance.
Alexis Stein, Elaine A Sia. Front Biosci (Landmark Ed) 2017
31
28


Apoptosis induced by persistent single-strand breaks in mitochondrial genome: critical role of EXOG (5'-EXO/endonuclease) in their repair.
Anne W Tann, Istvan Boldogh, Gregor Meiss, Wei Qian, Bennett Van Houten, Sankar Mitra, Bartosz Szczesny. J Biol Chem 2011
102
28

Reconstitution of a minimal mtDNA replisome in vitro.
Jenny A Korhonen, Xuan Hoi Pham, Mina Pellegrini, Maria Falkenberg. EMBO J 2004
247
28


Human mitochondrial transcription factor A induces a U-turn structure in the light strand promoter.
Anna Rubio-Cosials, Jasmin F Sidow, Nereida Jiménez-Menéndez, Pablo Fernández-Millán, Julio Montoya, Howard T Jacobs, Miquel Coll, Pau Bernadó, Maria Solà. Nat Struct Mol Biol 2011
116
28

Minimizing the damage: repair pathways keep mitochondrial DNA intact.
Lawrence Kazak, Aurelio Reyes, Ian J Holt. Nat Rev Mol Cell Biol 2012
202
28

The "fast" and the "slow" modes of mitochondrial DNA degradation.
Inna N Shokolenko, Glenn L Wilson, Mikhail F Alexeyev. Mitochondrial DNA A DNA Mapp Seq Anal 2016
9
28


Quantification of oxidative DNA modifications in mitochondria.
J Hegler, D Bittner, S Boiteux, B Epe. Carcinogenesis 1993
47
28

Mitochondrial genome maintenance in health and disease.
William C Copeland, Matthew J Longley. DNA Repair (Amst) 2014
81
28

Quantitative PCR-based measurement of nuclear and mitochondrial DNA damage and repair in mammalian cells.
Amy Furda, Janine H Santos, Joel N Meyer, Bennett Van Houten. Methods Mol Biol 2014
80
28

Mitochondrial DNA nucleoid structure.
Daniel F Bogenhagen. Biochim Biophys Acta 2012
153
28

Cross-strand binding of TFAM to a single mtDNA molecule forms the mitochondrial nucleoid.
Christian Kukat, Karen M Davies, Christian A Wurm, Henrik Spåhr, Nina A Bonekamp, Inge Kühl, Friederike Joos, Paola Loguercio Polosa, Chan Bae Park, Viktor Posse,[...]. Proc Natl Acad Sci U S A 2015
156
28


Microhomology-mediated end joining is the principal mediator of double-strand break repair during mitochondrial DNA lesions.
Satish Kumar Tadi, Robin Sebastian, Sumedha Dahal, Ravi K Babu, Bibha Choudhary, Sathees C Raghavan. Mol Biol Cell 2016
69
28



Mitochondrial oxidative stress-induced epigenetic modifications in pancreatic epithelial cells.
Pradyumna Kumar Mishra, Gorantla Venkata Raghuram, Deepika Jain, Subodh Kumar Jain, Naveen Kumar Khare, Neelam Pathak. Int J Toxicol 2014
25
28

Base Excision Repair in the Mitochondria.
Aishwarya Prakash, Sylvie Doublié. J Cell Biochem 2015
60
28

Identification of a novel human mitochondrial endo-/exonuclease Ddk1/c20orf72 necessary for maintenance of proper 7S DNA levels.
Roman J Szczesny, Monika S Hejnowicz, Kamil Steczkiewicz, Anna Muszewska, Lukasz S Borowski, Krzysztof Ginalski, Andrzej Dziembowski. Nucleic Acids Res 2013
27
28


Oxidative stress increases M1dG, a major peroxidation-derived DNA adduct, in mitochondrial DNA.
Orrette R Wauchope, Michelle M Mitchener, William N Beavers, James J Galligan, Jeannie M Camarillo, William D Sanders, Philip J Kingsley, Ha-Na Shim, Thomas Blackwell, Thong Luong,[...]. Nucleic Acids Res 2018
14
28

Mitochondrial DNA: A disposable genome?
Inna N Shokolenko, Mikhail F Alexeyev. Biochim Biophys Acta 2015
33
28


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.