A citation-based method for searching scientific literature

Juraj Gazdarica, Rastislav Hekel, Jaroslav Budis, Marcel Kucharik, Frantisek Duris, Jan Radvanszky, Jan Turna, Tomas Szemes. Int J Mol Sci 2019
Times Cited: 9







List of co-cited articles
60 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Presence of fetal DNA in maternal plasma and serum.
Y M Lo, N Corbetta, P F Chamberlain, V Rai, I L Sargent, C W Redman, J S Wainscoat. Lancet 1997
77

Determination of fetal DNA fraction from the plasma of pregnant women using sequence read counts.
Sung K Kim, Gregory Hannum, Jennifer Geis, John Tynan, Grant Hogg, Chen Zhao, Taylor J Jensen, Amin R Mazloom, Paul Oeth, Mathias Ehrich,[...]. Prenat Diagn 2015
127
66

Utilization of Benchtop Next Generation Sequencing Platforms Ion Torrent PGM and MiSeq in Noninvasive Prenatal Testing for Chromosome 21 Trisomy and Testing of Impact of In Silico and Physical Size Selection on Its Analytical Performance.
Gabriel Minarik, Gabriela Repiska, Michaela Hyblova, Emilia Nagyova, Katarina Soltys, Jaroslav Budis, Frantisek Duris, Rastislav Sysak, Maria Gerykova Bujalkova, Barbora Vlkova-Izrael,[...]. PLoS One 2015
26
55

Noninvasive prenatal screening for fetal aneuploidy, 2016 update: a position statement of the American College of Medical Genetics and Genomics.
Anthony R Gregg, Brian G Skotko, Judith L Benkendorf, Kristin G Monaghan, Komal Bajaj, Robert G Best, Susan Klugman, Michael S Watson. Genet Med 2016
366
55

Identification of Structural Variation from NGS-Based Non-Invasive Prenatal Testing.
Ondrej Pös, Jaroslav Budis, Zuzana Kubiritova, Marcel Kucharik, Frantisek Duris, Jan Radvanszky, Tomas Szemes. Int J Mol Sci 2019
11
44

Non-invasive prenatal testing (NIPT) by low coverage genomic sequencing: Detection limits of screened chromosomal microdeletions.
Marcel Kucharik, Andrej Gnip, Michaela Hyblova, Jaroslav Budis, Lucia Strieskova, Maria Harsanyova, Ondrej Pös, Zuzana Kubiritova, Jan Radvanszky, Gabriel Minarik,[...]. PLoS One 2020
13
44

Fetal fraction in maternal plasma cell-free DNA at 11-13 weeks' gestation: relation to maternal and fetal characteristics.
G Ashoor, A Syngelaki, L C Y Poon, J C Rezende, K H Nicolaides. Ultrasound Obstet Gynecol 2013
224
44

DNA sequencing of maternal plasma to detect Down syndrome: an international clinical validation study.
Glenn E Palomaki, Edward M Kloza, Geralyn M Lambert-Messerlian, James E Haddow, Louis M Neveux, Mathias Ehrich, Dirk van den Boom, Allan T Bombard, Cosmin Deciu, Wayne W Grody,[...]. Genet Med 2011
600
33

Recent trends in prenatal genetic screening and testing.
Ondrej Pös, Jaroslav Budiš, Tomáš Szemes. F1000Res 2019
29
33

Calculating the fetal fraction for noninvasive prenatal testing based on genome-wide nucleosome profiles.
Roy Straver, Cees B M Oudejans, Erik A Sistermans, Marcel J T Reinders. Prenat Diagn 2016
57
33

Fetal fraction evaluation in non-invasive prenatal screening (NIPS).
Matthew S Hestand, Mark Bessem, Peter van Rijn, Renee X de Menezes, Daoud Sie, Ingrid Bakker, Elles M J Boon, Erik A Sistermans, Marjan M Weiss. Eur J Hum Genet 2019
25
33

Comparing methods for fetal fraction determination and quality control of NIPT samples.
Daphne M van Beek, Roy Straver, Marian M Weiss, Elles M J Boon, Karin Huijsdens-van Amsterdam, Cees B M Oudejans, Marcel J T Reinders, Erik A Sistermans. Prenat Diagn 2017
36
33

Factors affecting cell-free DNA fetal fraction and the consequences for test accuracy.
Fergus Perry Scott, Melody Menezes, Ricardo Palma-Dias, Debbie Nisbet, Philip Schluter, Fabricio da Silva Costa, Andrew Cameron McLennan. J Matern Fetal Neonatal Med 2018
37
33

The impact of maternal plasma DNA fetal fraction on next generation sequencing tests for common fetal aneuploidies.
Jacob A Canick, Glenn E Palomaki, Edward M Kloza, Geralyn M Lambert-Messerlian, James E Haddow. Prenat Diagn 2013
222
33



Maternal plasma fetal DNA fractions in pregnancies with low and high risks for fetal chromosomal aneuploidies.
Irena Hudecova, Daljit Sahota, Macy M S Heung, Yongjie Jin, Wing S Lee, Tak Y Leung, Yuk Ming Dennis Lo, Rossa W K Chiu. PLoS One 2014
71
33

Noninvasive prenatal testing using a novel analysis pipeline to screen for all autosomal fetal aneuploidies improves pregnancy management.
Baran Bayindir, Luc Dehaspe, Nathalie Brison, Paul Brady, Simon Ardui, Molka Kammoun, Lars Van der Veken, Klaske Lichtenbelt, Kris Van den Bogaert, Jeroen Van Houdt,[...]. Eur J Hum Genet 2015
75
33


Adaptable Model Parameters in Non-Invasive Prenatal Testing Lead to More Stable Predictions.
Juraj Gazdarica, Jaroslav Budis, Frantisek Duris, Jan Turna, Tomas Szemes. Int J Mol Sci 2019
3
66

Quantification of peripheral whole blood, cell-free plasma and exosome encapsulated mitochondrial DNA copy numbers in patients with atrial fibrillation.
Beáta Soltész, Réka Urbancsek, Ondrej Pös, Orsolya Hajas, Ildikó Noémi Forgács, Edina Szilágyi, Edina Nagy-Baló, Tomas Szemes, Zoltán Csanádi, Bálint Nagy. J Biotechnol 2019
14
22

Summarizing and correcting the GC content bias in high-throughput sequencing.
Yuval Benjamini, Terence P Speed. Nucleic Acids Res 2012
463
22

WISECONDOR: detection of fetal aberrations from shallow sequencing maternal plasma based on a within-sample comparison scheme.
Roy Straver, Erik A Sistermans, Henne Holstege, Allerdien Visser, Cees B M Oudejans, Marcel J T Reinders. Nucleic Acids Res 2014
94
22

Detection of fetal subchromosomal abnormalities by sequencing circulating cell-free DNA from maternal plasma.
Chen Zhao, John Tynan, Mathias Ehrich, Gregory Hannum, Ron McCullough, Juan-Sebastian Saldivar, Paul Oeth, Dirk van den Boom, Cosmin Deciu. Clin Chem 2015
90
22

Fast gapped-read alignment with Bowtie 2.
Ben Langmead, Steven L Salzberg. Nat Methods 2012
22

Noninvasive diagnosis of fetal aneuploidy by shotgun sequencing DNA from maternal blood.
H Christina Fan, Yair J Blumenfeld, Usha Chitkara, Louanne Hudgins, Stephen R Quake. Proc Natl Acad Sci U S A 2008
691
22

Accuracy of non-invasive prenatal testing using cell-free DNA for detection of Down, Edwards and Patau syndromes: a systematic review and meta-analysis.
Sian Taylor-Phillips, Karoline Freeman, Julia Geppert, Adeola Agbebiyi, Olalekan A Uthman, Jason Madan, Angus Clarke, Siobhan Quenby, Aileen Clarke. BMJ Open 2016
186
22

Expanding the scope of noninvasive prenatal testing: detection of fetal microdeletion syndromes.
Ronald J Wapner, Joshua E Babiarz, Brynn Levy, Melissa Stosic, Bernhard Zimmermann, Styrmir Sigurjonsson, Nicholas Wayham, Allison Ryan, Milena Banjevic, Phil Lacroute,[...]. Am J Obstet Gynecol 2015
197
22

Result of Prospective Validation of the Trisomy Test® for the Detection of Chromosomal Trisomies.
Martina Sekelska, Anita Izsakova, Katarina Kubosova, Petra Tilandyova, Erika Csekes, Zaneta Kuchova, Michaela Hyblova, Maria Harsanyova, Marcel Kucharik, Jaroslav Budis,[...]. Diagnostics (Basel) 2019
4
50

Implementing non-invasive prenatal testing for aneuploidy in a national healthcare system: global challenges and national solutions.
Rachèl V van Schendel, Carla G van El, Eva Pajkrt, Lidewij Henneman, Martina C Cornel. BMC Health Serv Res 2017
41
22

Global perspectives on clinical adoption of NIPT.
Mollie A Minear, Celine Lewis, Subarna Pradhan, Subhashini Chandrasekharan. Prenat Diagn 2015
91
22

Analysis of cell-free DNA in maternal blood in screening for fetal aneuploidies: updated meta-analysis.
M M Gil, M S Quezada, R Revello, R Akolekar, K H Nicolaides. Ultrasound Obstet Gynecol 2015
318
22

WisecondorX: improved copy number detection for routine shallow whole-genome sequencing.
Lennart Raman, Annelies Dheedene, Matthias De Smet, Jo Van Dorpe, Björn Menten. Nucleic Acids Res 2019
40
22

Non-invasive prenatal testing as a valuable source of population specific allelic frequencies.
Jaroslav Budis, Juraj Gazdarica, Jan Radvanszky, Maria Harsanyova, Iveta Gazdaricova, Lucia Strieskova, Richard Frno, Frantisek Duris, Gabriel Minarik, Martina Sekelska,[...]. J Biotechnol 2019
9
22

Combining count- and length-based z-scores leads to improved predictions in non-invasive prenatal testing.
Jaroslav Budis, Juraj Gazdarica, Jan Radvanszky, Gabor Szucs, Marcel Kucharik, Lucia Strieskova, Iveta Gazdaricova, Maria Harsanyova, Frantisek Duris, Gabriel Minarik,[...]. Bioinformatics 2019
8
25

Performance of Streck cfDNA Blood Collection Tubes for Liquid Biopsy Testing.
Inga Medina Diaz, Annette Nocon, Daniel H Mehnert, Johannes Fredebohm, Frank Diehl, Frank Holtrup. PLoS One 2016
116
22

Influence of temperature during transportation on cell-free DNA analysis.
Mats Hidestrand, Renee Stokowski, Ken Song, Arnold Oliphant, Julie Deavers, Mary Goetsch, Pippa Simpson, Randall Kuhlman, Mary Ames, Michael Mitchell,[...]. Fetal Diagn Ther 2012
55
22

Maternal plasma DNA sequencing reveals the genome-wide genetic and mutational profile of the fetus.
Y M Dennis Lo, K C Allen Chan, Hao Sun, Eric Z Chen, Peiyong Jiang, Fiona M F Lun, Yama W Zheng, Tak Y Leung, Tze K Lau, Charles R Cantor,[...]. Sci Transl Med 2010
651
22

PREFACE: In silico pipeline for accurate cell-free fetal DNA fraction prediction.
Lennart Raman, Machteld Baetens, Matthias De Smet, Annelies Dheedene, Jo Van Dorpe, Björn Menten. Prenat Diagn 2019
8
25

Optimizing blood collection, transport and storage conditions for cell free DNA increases access to prenatal testing.
David Wong, Sharmili Moturi, Vach Angkachatchai, Reinhold Mueller, Grace DeSantis, Dirk van den Boom, Mathias Ehrich. Clin Biochem 2013
90
22

Factors affecting levels of circulating cell-free fetal DNA in maternal plasma and their implications for noninvasive prenatal testing.
Sarah L Kinnings, Jennifer A Geis, Eyad Almasri, Huiquan Wang, Xiaojun Guan, Ron M McCullough, Allan T Bombard, Juan-Sebastian Saldivar, Paul Oeth, Cosmin Deciu. Prenat Diagn 2015
70
22

Noninvasive prenatal detection and selective analysis of cell-free DNA obtained from maternal blood: evaluation for trisomy 21 and trisomy 18.
Andrew B Sparks, Craig A Struble, Eric T Wang, Ken Song, Arnold Oliphant. Am J Obstet Gynecol 2012
274
22

Factors affecting cell-free DNA fetal fraction: statistical analysis of 13,661 maternal plasmas for non-invasive prenatal screening.
Yaping Hou, Jiexia Yang, Yiming Qi, Fangfang Guo, Haishan Peng, Dongmei Wang, Yixia Wang, Xiaohui Luo, Yi Li, Aihua Yin. Hum Genomics 2019
23
22

Cost-effective and accurate method of measuring fetal fraction using SNP imputation.
Minjeong Kim, Jai-Hoon Kim, Kangseok Kim, Sunshin Kim. Bioinformatics 2018
5
40

First-trimester screening for trisomies by cfDNA testing of maternal blood in singleton and twin pregnancies: factors affecting test failure.
S Galeva, M M Gil, L Konstantinidou, R Akolekar, K H Nicolaides. Ultrasound Obstet Gynecol 2019
31
22

Quantification of fetal DNA by use of methylation-based DNA discrimination.
Anders O H Nygren, Jarrod Dean, Taylor J Jensen, Selena Kruse, William Kwong, Dirk van den Boom, Mathias Ehrich. Clin Chem 2010
93
22

Sequencing of short cfDNA fragments in NIPT improves fetal fraction with higher maternal BMI and early gestational age.
Longwei Qiao, Qin Zhang, Yuting Liang, Ang Gao, Yang Ding, Nannan Zhao, Wei Zhang, Hong Li, Yaojuan Lu, Ting Wang. Am J Transl Res 2019
9
22


Contingent first-trimester screening for aneuploidies with cell-free DNA in a Danish clinical setting.
C B Miltoft, L Rode, C K Ekelund, K Sundberg, S Kjaergaard, H Zingenberg, A Tabor. Ultrasound Obstet Gynecol 2018
22
22

Factors Associated With Informative Redraw After an Initial No Result in Noninvasive Prenatal Testing.
Peter Benn, Elizabeth Valenti, Shailen Shah, Kimberly Martin, Zachary Demko. Obstet Gynecol 2018
25
22


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.