A citation-based method for searching scientific literature

Michal Zalzman, W Alex Meltzer, Benjamin A Portney, Robert A Brown, Aditi Gupta. Curr Issues Mol Biol 2020
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



RNF4 negatively regulates NF-κB signaling by down-regulating TAB2.
Bo Tan, Rui Mu, Yan Chang, Yu-Bo Wang, Min Wu, Hai-Qing Tu, Yu-Cheng Zhang, Sai-Sai Guo, Xuan-He Qin, Tao Li,[...]. FEBS Lett 2015
16
100

Functional targeting of DNA damage to a nuclear pore-associated SUMO-dependent ubiquitin ligase.
Shigeki Nagai, Karine Dubrana, Monika Tsai-Pflugfelder, Marta B Davidson, Tania M Roberts, Grant W Brown, Elisa Varela, Florence Hediger, Susan M Gasser, Nevan J Krogan. Science 2008
310
100

RING tetramerization is required for nuclear body biogenesis and PML sumoylation.
Pengran Wang, Shirine Benhenda, Haiyan Wu, Valérie Lallemand-Breitenbach, Tao Zhen, Florence Jollivet, Laurent Peres, Yuwen Li, Sai-Juan Chen, Zhu Chen,[...]. Nat Commun 2018
31
100

Pds5 prevents the PolySUMO-dependent separation of sister chromatids.
Lisa M D'Ambrosio, Brigitte D Lavoie. Curr Biol 2014
29
100

PML body meets telomere: the beginning of an ALTernate ending?
Inn Chung, Sarah Osterwald, Katharina I Deeg, Karsten Rippe. Nucleus 2012
51
100

Chromatin organization and dynamics in double-strand break repair.
Andrew Seeber, Susan M Gasser. Curr Opin Genet Dev 2017
40
100



Transcriptional coregulator SNURF (RNF4) possesses ubiquitin E3 ligase activity.
M Häkli, K L Lorick, A M Weissman, O A Jänne, J J Palvimo. FEBS Lett 2004
39
100

Ubiquitin-like Protein Conjugation: Structures, Chemistry, and Mechanism.
Laurent Cappadocia, Christopher D Lima. Chem Rev 2018
154
100


Genetic analysis connects SLX5 and SLX8 to the SUMO pathway in Saccharomyces cerevisiae.
Zheng Wang, Grace Marie Jones, Gregory Prelich. Genetics 2006
64
100

Ataxin-3 consolidates the MDC1-dependent DNA double-strand break response by counteracting the SUMO-targeted ubiquitin ligase RNF4.
Annika Pfeiffer, Martijn S Luijsterburg, Klara Acs, Wouter W Wiegant, Angela Helfricht, Laura K Herzog, Melania Minoia, Claudia Böttcher, Florian A Salomons, Haico van Attikum,[...]. EMBO J 2017
37
100

Systematic study of protein sumoylation: Development of a site-specific predictor of SUMOsp 2.0.
Jian Ren, Xinjiao Gao, Changjiang Jin, Mei Zhu, Xiwei Wang, Andrew Shaw, Longping Wen, Xuebiao Yao, Yu Xue. Proteomics 2009
177
100

Enhancement of TGF-β signaling responses by the E3 ubiquitin ligase Arkadia provides tumor suppression in colorectal cancer.
Vikas Sharma, Anna G Antonacopoulou, Shinya Tanaka, Alexios A Panoutsopoulos, Vasiliki Bravou, Haralabos P Kalofonos, Vasso Episkopou. Cancer Res 2011
26
100

PML nuclear bodies: from architecture to function.
Valérie Lallemand-Breitenbach, Hugues de Thé. Curr Opin Cell Biol 2018
67
100

SUMO-Dependent Relocalization of Eroded Telomeres to Nuclear Pore Complexes Controls Telomere Recombination.
Dmitri Churikov, Ferose Charifi, Nadine Eckert-Boulet, Sonia Silva, Marie-Noelle Simon, Michael Lisby, Vincent Géli. Cell Rep 2016
44
100

Proteome-wide analysis of SUMO2 targets in response to pathological DNA replication stress in human cells.
Sara Bursomanno, Petra Beli, Asif M Khan, Sheroy Minocherhomji, Sebastian A Wagner, Simon Bekker-Jensen, Niels Mailand, Chunaram Choudhary, Ian D Hickson, Ying Liu. DNA Repair (Amst) 2015
25
100

The Swi2-Snf2-like protein Uls1 is involved in replication stress response.
Magdalena Cal-Bakowska, Ireneusz Litwin, Tomasz Bocer, Robert Wysocki, Dorota Dziadkowiec. Nucleic Acids Res 2011
22
100

c-Myc is targeted to the proteasome for degradation in a SUMOylation-dependent manner, regulated by PIAS1, SENP7 and RNF4.
Román González-Prieto, Sabine Ag Cuijpers, Ramesh Kumar, Ivo A Hendriks, Alfred Co Vertegaal. Cell Cycle 2015
50
100

Nuclear envelopathies: a complex LINC between nuclear envelope and pathology.
Alexandre Janin, Delphine Bauer, Francesca Ratti, Gilles Millat, Alexandre Méjat. Orphanet J Rare Dis 2017
49
100


Factor inhibiting HIF1-A novel target of SUMOylation in the human placenta.
Julien Sallais, Sruthi Alahari, Andrea Tagliaferro, Jayonta Bhattacharjee, Martin Post, Isabella Caniggia. Oncotarget 2017
3
100


USP7 is a SUMO deubiquitinase essential for DNA replication.
Emilio Lecona, Sara Rodriguez-Acebes, Julia Specks, Andres J Lopez-Contreras, Isabel Ruppen, Matilde Murga, Javier Muñoz, Juan Mendez, Oscar Fernandez-Capetillo. Nat Struct Mol Biol 2016
72
100


Exploring the RING-catalyzed ubiquitin transfer mechanism by MD and QM/MM calculations.
Yunmei Zhen, Guangrong Qin, Cheng Luo, Hualiang Jiang, Kunqian Yu, Guanghui Chen. PLoS One 2014
6
100

Slx5-Slx8 ubiquitin ligase targets active pools of the Yen1 nuclease to limit crossover formation.
Ibtissam Talhaoui, Manuel Bernal, Janet R Mullen, Hugo Dorison, Benoit Palancade, Steven J Brill, Gerard Mazón. Nat Commun 2018
10
100

ATL response to arsenic/interferon therapy is triggered by SUMO/PML/RNF4-dependent Tax degradation.
Zeina Dassouki, Umut Sahin, Hiba El Hajj, Florence Jollivet, Youmna Kfoury, Valérie Lallemand-Breitenbach, Olivier Hermine, Hugues de Thé, Ali Bazarbachi. Blood 2015
41
100

Ubiquitin-dependent proteolytic control of SUMO conjugates.
Kristina Uzunova, Kerstin Göttsche, Maria Miteva, Stefan R Weisshaar, Christoph Glanemann, Marion Schnellhardt, Michaela Niessen, Hartmut Scheel, Kay Hofmann, Erica S Johnson,[...]. J Biol Chem 2007
236
100

The DNA damage response at eroded telomeres and tethering to the nuclear pore complex.
Basheer Khadaroo, M Teresa Teixeira, Pierre Luciano, Nadine Eckert-Boulet, Susanne M Germann, Marie Noelle Simon, Irene Gallina, Pauline Abdallah, Eric Gilson, Vincent Géli,[...]. Nat Cell Biol 2009
139
100

ATM controls the extent of DNA end resection by eliciting sequential posttranslational modifications of CtIP.
Jinhua Han, Li Wan, Guixing Jiang, Liping Cao, Feiyu Xia, Tian Tian, Xiaomei Zhu, Mingjie Wu, Michael S Y Huen, Yi Wang,[...]. Proc Natl Acad Sci U S A 2021
2
100

Dynamic PML protein nucleolar associations with persistent DNA damage lesions in response to nucleolar stress and senescence-inducing stimuli.
Terezie Imrichova, Sona Hubackova, Alena Kucerova, Jan Kosla, Jiri Bartek, Zdenek Hodny, Pavla Vasicova. Aging (Albany NY) 2019
3
100

The yeast Slx5-Slx8 DNA integrity complex displays ubiquitin ligase activity.
Tatsuya Ii, Jacqueline Fung, Janet R Mullen, Steven J Brill. Cell Cycle 2007
34
100

RNF111/Arkadia is a SUMO-targeted ubiquitin ligase that facilitates the DNA damage response.
Sara L Poulsen, Rebecca K Hansen, Sebastian A Wagner, Loes van Cuijk, Gijsbert J van Belle, Werner Streicher, Mats Wikström, Chunaram Choudhary, Adriaan B Houtsmuller, Jurgen A Marteijn,[...]. J Cell Biol 2013
99
100

RNF4 and PLK1 are required for replication fork collapse in ATR-deficient cells.
Ryan L Ragland, Sima Patel, Rebecca S Rivard, Kevin Smith, Ashley A Peters, Anja-Katrin Bielinsky, Eric J Brown. Genes Dev 2013
65
100

SUMO-Targeted Ubiquitin Ligase (STUbL) Slx5 regulates proteolysis of centromeric histone H3 variant Cse4 and prevents its mislocalization to euchromatin.
Kentaro Ohkuni, Yoshimitsu Takahashi, Alyona Fulp, Josh Lawrimore, Wei-Chun Au, Nagesh Pasupala, Reuben Levy-Myers, Jack Warren, Alexander Strunnikov, Richard E Baker,[...]. Mol Biol Cell 2016
40
100

Assembly of a polymeric chain of SUMO1 on human topoisomerase I in vitro.
Meiluen Yang, Chia-Tse Hsu, Chun-Yuan Ting, Leroy F Liu, Jaulang Hwang. J Biol Chem 2006
54
100

System-wide Analysis of SUMOylation Dynamics in Response to Replication Stress Reveals Novel Small Ubiquitin-like Modified Target Proteins and Acceptor Lysines Relevant for Genome Stability.
Zhenyu Xiao, Jer-Gung Chang, Ivo A Hendriks, Jón Otti Sigurðsson, Jesper V Olsen, Alfred C O Vertegaal. Mol Cell Proteomics 2015
52
100

RNF4 is required for DNA double-strand break repair in vivo.
R Vyas, R Kumar, F Clermont, A Helfricht, P Kalev, P Sotiropoulou, I A Hendriks, E Radaelli, T Hochepied, C Blanpain,[...]. Cell Death Differ 2013
69
100


RNF4-mediated SUMOylation is essential for NDRG2 suppression of lung adenocarcinoma.
Jicheng Tantai, Xufeng Pan, Dingzhong Hu. Oncotarget 2016
5
100

Functional 3D architecture in an intrinsically disordered E3 ligase domain facilitates ubiquitin transfer.
Paul Murphy, Yingqi Xu, Sarah L Rouse, Ellis G Jaffray, Anna Plechanovová, Steve J Matthews, J Carlos Penedo, Ronald T Hay. Nat Commun 2020
3
100

Multivalent interactions of the SUMO-interaction motifs in RING finger protein 4 determine the specificity for chains of the SUMO.
Kirstin Keusekotten, Veronika N Bade, Katrin Meyer-Teschendorf, Annie Miriam Sriramachandran, Katrin Fischer-Schrader, Anke Krause, Christiane Horst, Günter Schwarz, Kay Hofmann, R Jürgen Dohmen,[...]. Biochem J 2014
27
100

Historical Perspective of Eukaryotic DNA Replication.
Thomas Kelly. Adv Exp Med Biol 2017
3
100


SUMOylation of HNF4α regulates protein stability and hepatocyte function.
Wenli Zhou, Zara Hannoun, Ellis Jaffray, Claire N Medine, James R Black, Sebastian Greenhough, Liang Zhu, James A Ross, Stuart Forbes, Ian Wilmut,[...]. J Cell Sci 2012
33
100

End-joining inhibition at telomeres requires the translocase and polySUMO-dependent ubiquitin ligase Uls1.
Rachel Lescasse, Sabrina Pobiega, Isabelle Callebaut, Stéphane Marcand. EMBO J 2013
38
100

RNA interference demonstrates a novel role for H2A.Z in chromosome segregation.
Danny Rangasamy, Ian Greaves, David J Tremethick. Nat Struct Mol Biol 2004
158
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.