A citation-based method for searching scientific literature

John F Cryan, Kenneth J O'Riordan, Caitlin S M Cowan, Kiran V Sandhu, Thomaz F S Bastiaanssen, Marcus Boehme, Martin G Codagnone, Sofia Cussotto, Christine Fulling, Anna V Golubeva, Katherine E Guzzetta, Minal Jaggar, Caitriona M Long-Smith, Joshua M Lyte, Jason A Martin, Alicia Molinero-Perez, Gerard Moloney, Emanuela Morelli, Enrique Morillas, Rory O'Connor, Joana S Cruz-Pereira, Veronica L Peterson, Kieran Rea, Nathaniel L Ritz, Eoin Sherwin, Simon Spichak, Emily M Teichman, Marcel van de Wouw, Ana Paula Ventura-Silva, Shauna E Wallace-Fitzsimons, Niall Hyland, Gerard Clarke, Timothy G Dinan. Physiol Rev 2019
Times Cited: 756







List of co-cited articles
940 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Altered fecal microbiota composition in patients with major depressive disorder.
Haiyin Jiang, Zongxin Ling, Yonghua Zhang, Hongjin Mao, Zhanping Ma, Yan Yin, Weihong Wang, Wenxin Tang, Zhonglin Tan, Jianfei Shi,[...]. Brain Behav Immun 2015
887
18

Ingestion of Lactobacillus strain regulates emotional behavior and central GABA receptor expression in a mouse via the vagus nerve.
Javier A Bravo, Paul Forsythe, Marianne V Chew, Emily Escaravage, Hélène M Savignac, Timothy G Dinan, John Bienenstock, John F Cryan. Proc Natl Acad Sci U S A 2011
17

Postnatal microbial colonization programs the hypothalamic-pituitary-adrenal system for stress response in mice.
Nobuyuki Sudo, Yoichi Chida, Yuji Aiba, Junko Sonoda, Naomi Oyama, Xiao-Nian Yu, Chiharu Kubo, Yasuhiro Koga. J Physiol 2004
14

Gut microbiome remodeling induces depressive-like behaviors through a pathway mediated by the host's metabolism.
P Zheng, B Zeng, C Zhou, M Liu, Z Fang, X Xu, L Zeng, J Chen, S Fan, X Du,[...]. Mol Psychiatry 2016
776
13

Host microbiota constantly control maturation and function of microglia in the CNS.
Daniel Erny, Anna Lena Hrabě de Angelis, Diego Jaitin, Peter Wieghofer, Ori Staszewski, Eyal David, Hadas Keren-Shaul, Tanel Mahlakoiv, Kristin Jakobshagen, Thorsten Buch,[...]. Nat Neurosci 2015
12

The role of short-chain fatty acids in microbiota-gut-brain communication.
Boushra Dalile, Lukas Van Oudenhove, Bram Vervliet, Kristin Verbeke. Nat Rev Gastroenterol Hepatol 2019
508
12

Normal gut microbiota modulates brain development and behavior.
Rochellys Diaz Heijtz, Shugui Wang, Farhana Anuar, Yu Qian, Britta Björkholm, Annika Samuelsson, Martin L Hibberd, Hans Forssberg, Sven Pettersson. Proc Natl Acad Sci U S A 2011
12

Short-chain fatty acids: microbial metabolites that alleviate stress-induced brain-gut axis alterations.
Marcel van de Wouw, Marcus Boehme, Joshua M Lyte, Niamh Wiley, Conall Strain, Orla O'Sullivan, Gerard Clarke, Catherine Stanton, Timothy G Dinan, John F Cryan. J Physiol 2018
210
11

Psychobiotics: a novel class of psychotropic.
Timothy G Dinan, Catherine Stanton, John F Cryan. Biol Psychiatry 2013
506
10

Correlation between the human fecal microbiota and depression.
A Naseribafrouei, K Hestad, E Avershina, M Sekelja, A Linløkken, R Wilson, K Rudi. Neurogastroenterol Motil 2014
503
10

Gut Microbiota Regulation of Tryptophan Metabolism in Health and Disease.
Allison Agus, Julien Planchais, Harry Sokol. Cell Host Microbe 2018
592
10

The Role of Short-Chain Fatty Acids From Gut Microbiota in Gut-Brain Communication.
Ygor Parladore Silva, Andressa Bernardi, Rudimar Luiz Frozza. Front Endocrinol (Lausanne) 2020
312
10

An obesity-associated gut microbiome with increased capacity for energy harvest.
Peter J Turnbaugh, Ruth E Ley, Michael A Mahowald, Vincent Magrini, Elaine R Mardis, Jeffrey I Gordon. Nature 2006
9

The microbiome-gut-brain axis during early life regulates the hippocampal serotonergic system in a sex-dependent manner.
G Clarke, S Grenham, P Scully, P Fitzgerald, R D Moloney, F Shanahan, T G Dinan, J F Cryan. Mol Psychiatry 2013
884
9


Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson's Disease.
Timothy R Sampson, Justine W Debelius, Taren Thron, Stefan Janssen, Gauri G Shastri, Zehra Esra Ilhan, Collin Challis, Catherine E Schretter, Sandra Rocha, Viviana Gradinaru,[...]. Cell 2016
9

Expert consensus document. The International Scientific Association for Probiotics and Prebiotics consensus statement on the scope and appropriate use of the term probiotic.
Colin Hill, Francisco Guarner, Gregor Reid, Glenn R Gibson, Daniel J Merenstein, Bruno Pot, Lorenzo Morelli, Roberto Berni Canani, Harry J Flint, Seppo Salminen,[...]. Nat Rev Gastroenterol Hepatol 2014
9

The neuroactive potential of the human gut microbiota in quality of life and depression.
Mireia Valles-Colomer, Gwen Falony, Youssef Darzi, Ettje F Tigchelaar, Jun Wang, Raul Y Tito, Carmen Schiweck, Alexander Kurilshikov, Marie Joossens, Cisca Wijmenga,[...]. Nat Microbiol 2019
542
9

The gut microbiota influences blood-brain barrier permeability in mice.
Viorica Braniste, Maha Al-Asmakh, Czeslawa Kowal, Farhana Anuar, Afrouz Abbaspour, Miklós Tóth, Agata Korecka, Nadja Bakocevic, Lai Guan Ng, Parag Kundu,[...]. Sci Transl Med 2014
916
9

The gut-brain axis: interactions between enteric microbiota, central and enteric nervous systems.
Marilia Carabotti, Annunziata Scirocco, Maria Antonietta Maselli, Carola Severi. Ann Gastroenterol 2015
802
9

Anxiety, Depression, and the Microbiome: A Role for Gut Peptides.
Gilliard Lach, Harriet Schellekens, Timothy G Dinan, John F Cryan. Neurotherapeutics 2018
199
8

Transferring the blues: Depression-associated gut microbiota induces neurobehavioural changes in the rat.
John R Kelly, Yuliya Borre, Ciaran O' Brien, Elaine Patterson, Sahar El Aidy, Jennifer Deane, Paul J Kennedy, Sasja Beers, Karen Scott, Gerard Moloney,[...]. J Psychiatr Res 2016
607
8

Association of brain amyloidosis with pro-inflammatory gut bacterial taxa and peripheral inflammation markers in cognitively impaired elderly.
Annamaria Cattaneo, Nadia Cattane, Samantha Galluzzi, Stefania Provasi, Nicola Lopizzo, Cristina Festari, Clarissa Ferrari, Ugo Paolo Guerra, Barbara Paghera, Cristina Muscio,[...]. Neurobiol Aging 2017
422
8

Bacterial infection causes stress-induced memory dysfunction in mice.
Mélanie G Gareau, Eytan Wine, David M Rodrigues, Joon Ho Cho, Mark T Whary, Dana J Philpott, Glenda Macqueen, Philip M Sherman. Gut 2011
486
8

Gut-brain axis: how the microbiome influences anxiety and depression.
Jane A Foster, Karen-Anne McVey Neufeld. Trends Neurosci 2013
8

Interactions between the microbiota, immune and nervous systems in health and disease.
Thomas C Fung, Christine A Olson, Elaine Y Hsiao. Nat Neurosci 2017
701
7

The intestinal microbiota affect central levels of brain-derived neurotropic factor and behavior in mice.
Premysl Bercik, Emmanuel Denou, Josh Collins, Wendy Jackson, Jun Lu, Jennifer Jury, Yikang Deng, Patricia Blennerhassett, Joseph Macri, Kathy D McCoy,[...]. Gastroenterology 2011
884
7

Absence of the gut microbiota enhances anxiety-like behavior and neuroendocrine response to acute stress in rats.
Michèle Crumeyrolle-Arias, Mathilde Jaglin, Aurélia Bruneau, Sylvie Vancassel, Ana Cardona, Valérie Daugé, Laurent Naudon, Sylvie Rabot. Psychoneuroendocrinology 2014
282
7

Indigenous bacteria from the gut microbiota regulate host serotonin biosynthesis.
Jessica M Yano, Kristie Yu, Gregory P Donaldson, Gauri G Shastri, Phoebe Ann, Liang Ma, Cathryn R Nagler, Rustem F Ismagilov, Sarkis K Mazmanian, Elaine Y Hsiao. Cell 2015
7

The Central Nervous System and the Gut Microbiome.
Gil Sharon, Timothy R Sampson, Daniel H Geschwind, Sarkis K Mazmanian. Cell 2016
540
7

Human Gut Microbiota from Autism Spectrum Disorder Promote Behavioral Symptoms in Mice.
Gil Sharon, Nikki Jamie Cruz, Dae-Wook Kang, Michael J Gandal, Bo Wang, Young-Mo Kim, Erika M Zink, Cameron P Casey, Bryn C Taylor, Christianne J Lane,[...]. Cell 2019
327
7

QIIME allows analysis of high-throughput community sequencing data.
J Gregory Caporaso, Justin Kuczynski, Jesse Stombaugh, Kyle Bittinger, Frederic D Bushman, Elizabeth K Costello, Noah Fierer, Antonio Gonzalez Peña, Julia K Goodrich, Jeffrey I Gordon,[...]. Nat Methods 2010
6

Disturbance of the gut microbiota in early-life selectively affects visceral pain in adulthood without impacting cognitive or anxiety-related behaviors in male rats.
S M O'Mahony, V D Felice, K Nally, H M Savignac, M J Claesson, P Scully, J Woznicki, N P Hyland, F Shanahan, E M Quigley,[...]. Neuroscience 2014
156
6

Short chain fatty acids and gut microbiota differ between patients with Parkinson's disease and age-matched controls.
Marcus M Unger, Jörg Spiegel, Klaus-Ulrich Dillmann, David Grundmann, Hannah Philippeit, Jan Bürmann, Klaus Faßbender, Andreas Schwiertz, Karl-Herbert Schäfer. Parkinsonism Relat Disord 2016
460
6

Sodium oligomannate therapeutically remodels gut microbiota and suppresses gut bacterial amino acids-shaped neuroinflammation to inhibit Alzheimer's disease progression.
Xinyi Wang, Guangqiang Sun, Teng Feng, Jing Zhang, Xun Huang, Tao Wang, Zuoquan Xie, Xingkun Chu, Jun Yang, Huan Wang,[...]. Cell Res 2019
294
6

Chronic gastrointestinal inflammation induces anxiety-like behavior and alters central nervous system biochemistry in mice.
Premysl Bercik, Elena F Verdu, Jane A Foster, Joseph Macri, Murray Potter, Xiaxing Huang, Paul Malinowski, Wendy Jackson, Patricia Blennerhassett, Karen A Neufeld,[...]. Gastroenterology 2010
355
6

Consumption of fermented milk product with probiotic modulates brain activity.
Kirsten Tillisch, Jennifer Labus, Lisa Kilpatrick, Zhiguo Jiang, Jean Stains, Bahar Ebrat, Denis Guyonnet, Sophie Legrain-Raspaud, Beatrice Trotin, Bruce Naliboff,[...]. Gastroenterology 2013
572
6


The interplay between the intestinal microbiota and the brain.
Stephen M Collins, Michael Surette, Premysl Bercik. Nat Rev Microbiol 2012
813
6

The neuropharmacology of butyrate: The bread and butter of the microbiota-gut-brain axis?
Roman M Stilling, Marcel van de Wouw, Gerard Clarke, Catherine Stanton, Timothy G Dinan, John F Cryan. Neurochem Int 2016
299
6


Microbiota-Gut-Brain Axis: New Therapeutic Opportunities.
Caitríona Long-Smith, Kenneth J O'Riordan, Gerard Clarke, Catherine Stanton, Timothy G Dinan, John F Cryan. Annu Rev Pharmacol Toxicol 2020
97
6

Metabolomics analysis reveals large effects of gut microflora on mammalian blood metabolites.
William R Wikoff, Andrew T Anfora, Jun Liu, Peter G Schultz, Scott A Lesley, Eric C Peters, Gary Siuzdak. Proc Natl Acad Sci U S A 2009
6

Gut microbiota in human metabolic health and disease.
Yong Fan, Oluf Pedersen. Nat Rev Microbiol 2021
372
6

Serotonin, tryptophan metabolism and the brain-gut-microbiome axis.
S M O'Mahony, G Clarke, Y E Borre, T G Dinan, J F Cryan. Behav Brain Res 2015
766
6

Psychobiotics and the Manipulation of Bacteria-Gut-Brain Signals.
Amar Sarkar, Soili M Lehto, Siobhán Harty, Timothy G Dinan, John F Cryan, Philip W J Burnet. Trends Neurosci 2016
326
6

The gut microbiota-brain axis in behaviour and brain disorders.
Livia H Morais, Henry L Schreiber, Sarkis K Mazmanian. Nat Rev Microbiol 2021
161
6

Microbiota modulate behavioral and physiological abnormalities associated with neurodevelopmental disorders.
Elaine Y Hsiao, Sara W McBride, Sophia Hsien, Gil Sharon, Embriette R Hyde, Tyler McCue, Julian A Codelli, Janet Chow, Sarah E Reisman, Joseph F Petrosino,[...]. Cell 2013
6

Stress & the gut-brain axis: Regulation by the microbiome.
Jane A Foster, Linda Rinaman, John F Cryan. Neurobiol Stress 2017
355
6

The gut microbiota in anxiety and depression - A systematic review.
Carra A Simpson, Carmela Diaz-Arteche, Djamila Eliby, Orli S Schwartz, Julian G Simmons, Caitlin S M Cowan. Clin Psychol Rev 2021
60
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.