A citation-based method for searching scientific literature

Cemalettin Bekpen, Diethard Tautz. Brief Funct Genomics 2019
Times Cited: 2







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A majority of the cancer/testis antigens are intrinsically disordered proteins.
Krithika Rajagopalan, Steven M Mooney, Nehal Parekh, Robert H Getzenberg, Prakash Kulkarni. J Cell Biochem 2011
99
50

The evolution of human segmental duplications and the core duplicon hypothesis.
T Marques-Bonet, E E Eichler. Cold Spring Harb Symp Quant Biol 2009
35
50

Intrinsically disordered proteins in human diseases: introducing the D2 concept.
Vladimir N Uversky, Christopher J Oldfield, A Keith Dunker. Annu Rev Biophys 2008
874
50

Length-dependent prediction of protein intrinsic disorder.
Kang Peng, Predrag Radivojac, Slobodan Vucetic, A Keith Dunker, Zoran Obradovic. BMC Bioinformatics 2006
565
50

Intrinsically unstructured proteins and their functions.
H Jane Dyson, Peter E Wright. Nat Rev Mol Cell Biol 2005
50

PONDR-FIT: a meta-predictor of intrinsically disordered amino acids.
Bin Xue, Roland L Dunbrack, Robert W Williams, A Keith Dunker, Vladimir N Uversky. Biochim Biophys Acta 2010
668
50

Proteoform: a single term describing protein complexity.
Lloyd M Smith, Neil L Kelleher. Nat Methods 2013
682
50

Intrinsic disorder in pathogenic and non-pathogenic microbes: discovering and analyzing the unfoldomes of early-branching eukaryotes.
Amrita Mohan, William J Sullivan, Predrag Radivojac, A Keith Dunker, Vladimir N Uversky. Mol Biosyst 2008
93
50



SCOP2 prototype: a new approach to protein structure mining.
Antonina Andreeva, Dave Howorth, Cyrus Chothia, Eugene Kulesha, Alexey G Murzin. Nucleic Acids Res 2014
144
50

Improving protein order-disorder classification using charge-hydropathy plots.
Fei Huang, Christopher J Oldfield, Bin Xue, Wei-Lun Hsu, Jingwei Meng, Xiaowen Liu, Li Shen, Pedro Romero, Vladimir N Uversky, A Dunker. BMC Bioinformatics 2014
35
50


Abundance of intrinsic disorder in protein associated with cardiovascular disease.
Yugong Cheng, Tanguy LeGall, Christopher J Oldfield, A Keith Dunker, Vladimir N Uversky. Biochemistry 2006
129
50

D²P²: database of disordered protein predictions.
Matt E Oates, Pedro Romero, Takashi Ishida, Mohamed Ghalwash, Marcin J Mizianty, Bin Xue, Zsuzsanna Dosztányi, Vladimir N Uversky, Zoran Obradovic, Lukasz Kurgan,[...]. Nucleic Acids Res 2013
340
50

The protein non-folding problem: amino acid determinants of intrinsic order and disorder.
R M Williams, Z Obradovi, V Mathura, W Braun, E C Garner, J Young, S Takayama, C J Brown, A K Dunker. Pac Symp Biocomput 2001
149
50

IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content.
Zsuzsanna Dosztányi, Veronika Csizmok, Peter Tompa, István Simon. Bioinformatics 2005
50

Structure of chromosomal duplicons and their role in mediating human genomic disorders.
Y Ji, E E Eichler, S Schwartz, R D Nicholls. Genome Res 2000
177
50

Archaic chaos: intrinsically disordered proteins in Archaea.
Bin Xue, Robert W Williams, Christopher J Oldfield, A Keith Dunker, Vladimir N Uversky. BMC Syst Biol 2010
93
50

Unusual biophysics of intrinsically disordered proteins.
Vladimir N Uversky. Biochim Biophys Acta 2013
328
50


Recent segmental duplications in the human genome.
Jeffrey A Bailey, Zhiping Gu, Royden A Clark, Knut Reinert, Rhea V Samonte, Stuart Schwartz, Mark D Adams, Eugene W Myers, Peter W Li, Evan E Eichler. Science 2002
931
50

Binding of intrinsically disordered proteins is not necessarily accompanied by a structural transition to a folded form.
Alexander B Sigalov, Anastasia V Zhuravleva, Vladislav Yu Orekhov. Biochimie 2007
97
50

Function and structure of inherently disordered proteins.
A Keith Dunker, Israel Silman, Vladimir N Uversky, Joel L Sussman. Curr Opin Struct Biol 2008
662
50



Composition Profiler: a tool for discovery and visualization of amino acid composition differences.
Vladimir Vacic, Vladimir N Uversky, A Keith Dunker, Stefano Lonardi. BMC Bioinformatics 2007
240
50


Human adaptation and evolution by segmental duplication.
Megan Y Dennis, Evan E Eichler. Curr Opin Genet Dev 2016
65
50


Structural studies of p21Waf1/Cip1/Sdi1 in the free and Cdk2-bound state: conformational disorder mediates binding diversity.
R W Kriwacki, L Hengst, L Tennant, S I Reed, P E Wright. Proc Natl Acad Sci U S A 1996
440
50


Exploring the binding diversity of intrinsically disordered proteins involved in one-to-many binding.
Wei-Lun Hsu, Christopher J Oldfield, Bin Xue, Jingwei Meng, Fei Huang, Pedro Romero, Vladimir N Uversky, A Keith Dunker. Protein Sci 2013
119
50

Intrinsic disorder is a common feature of hub proteins from four eukaryotic interactomes.
Chad Haynes, Christopher J Oldfield, Fei Ji, Niels Klitgord, Michael E Cusick, Predrag Radivojac, Vladimir N Uversky, Marc Vidal, Lilia M Iakoucheva. PLoS Comput Biol 2006
420
50

Understanding protein non-folding.
Vladimir N Uversky, A Keith Dunker. Biochim Biophys Acta 2010
801
50

Linking folding and binding.
Peter E Wright, H Jane Dyson. Curr Opin Struct Biol 2009
720
50

Intrinsic disorder in putative protein sequences.
Uros Midic, Zoran Obradovic. Proteome Sci 2012
14
50

The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored.
Damian Szklarczyk, Andrea Franceschini, Michael Kuhn, Milan Simonovic, Alexander Roth, Pablo Minguez, Tobias Doerks, Manuel Stark, Jean Muller, Peer Bork,[...]. Nucleic Acids Res 2011
50

Intrinsically disordered protein.
A K Dunker, J D Lawson, C J Brown, R M Williams, P Romero, J S Oh, C J Oldfield, A M Campen, C M Ratliff, K W Hipps,[...]. J Mol Graph Model 2001
50





Patterns of segmental duplication in the human genome.
Liqing Zhang, Henry H S Lu, Wen-yu Chung, Jing Yang, Wen-Hsiung Li. Mol Biol Evol 2005
90
50

Disorder and sequence repeats in hub proteins and their implications for network evolution.
Zsuzsanna Dosztányi, Jake Chen, A Keith Dunker, István Simon, Peter Tompa. J Proteome Res 2006
248
50

Fuzziness: linking regulation to protein dynamics.
Monika Fuxreiter. Mol Biosyst 2012
114
50

The protein trinity--linking function and disorder.
A K Dunker, Z Obradovic. Nat Biotechnol 2001
430
50

Intrinsic disorder in the human spliceosomal proteome.
Iga Korneta, Janusz M Bujnicki. PLoS Comput Biol 2012
61
50

Protein intrinsic disorder and structure-function continuum.
Vladimir N Uversky. Prog Mol Biol Transl Sci 2019
22
50

SUPERFAMILY 1.75 including a domain-centric gene ontology method.
David A de Lima Morais, Hai Fang, Owen J L Rackham, Derek Wilson, Ralph Pethica, Cyrus Chothia, Julian Gough. Nucleic Acids Res 2011
107
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.