A citation-based method for searching scientific literature

Ryan O'Hara, Enzo Tedone, Andrew Ludlow, Ejun Huang, Beatrice Arosio, Daniela Mari, Jerry W Shay. Genome Res 2019
Times Cited: 34







List of co-cited articles
263 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mitochondrial DNA copy number in peripheral blood cells declines with age and is associated with general health among elderly.
Jonas Mengel-From, Mikael Thinggaard, Christine Dalgård, Kirsten Ohm Kyvik, Kaare Christensen, Lene Christiansen. Hum Genet 2014
178
20

Evaluation of mitochondrial DNA copy number estimation techniques.
Ryan J Longchamps, Christina A Castellani, Stephanie Y Yang, Charles E Newcomb, Jason A Sumpter, John Lane, Megan L Grove, Eliseo Guallar, Nathan Pankratz, Kent D Taylor,[...]. PLoS One 2020
29
24

Age-Related and Heteroplasmy-Related Variation in Human mtDNA Copy Number.
Manja Wachsmuth, Alexander Hübner, Mingkun Li, Burkhard Madea, Mark Stoneking. PLoS Genet 2016
86
17

Comprehensive molecular characterization of mitochondrial genomes in human cancers.
Yuan Yuan, Young Seok Ju, Youngwook Kim, Jun Li, Yumeng Wang, Christopher J Yoon, Yang Yang, Inigo Martincorena, Chad J Creighton, John N Weinstein,[...]. Nat Genet 2020
91
17

DNA extraction procedures meaningfully influence qPCR-based mtDNA copy number determination.
Wen Guo, Lan Jiang, Shalender Bhasin, Shaharyar M Khan, Russell H Swerdlow. Mitochondrion 2009
111
17

Premature ageing in mice expressing defective mitochondrial DNA polymerase.
Aleksandra Trifunovic, Anna Wredenberg, Maria Falkenberg, Johannes N Spelbrink, Anja T Rovio, Carl E Bruder, Mohammad Bohlooly-Y, Sebastian Gidlöf, Anders Oldfors, Rolf Wibom,[...]. Nature 2004
14

Mitochondrial DNA copy number variation across human cancers.
Ed Reznik, Martin L Miller, Yasin Şenbabaoğlu, Nadeem Riaz, Judy Sarungbam, Satish K Tickoo, Hikmat A Al-Ahmadie, William Lee, Venkatraman E Seshan, A Ari Hakimi,[...]. Elife 2016
240
14

Plasmid-normalized quantification of relative mitochondrial DNA copy number.
Federica Fazzini, Bernd Schöpf, Michael Blatzer, Stefan Coassin, Andrew A Hicks, Florian Kronenberg, Liane Fendt. Sci Rep 2018
29
17

mtDNA heteroplasmy level and copy number indicate disease burden in m.3243A>G mitochondrial disease.
John P Grady, Sarah J Pickett, Yi Shiau Ng, Charlotte L Alston, Emma L Blakely, Steven A Hardy, Catherine L Feeney, Alexandra A Bright, Andrew M Schaefer, Gráinne S Gorman,[...]. EMBO Mol Med 2018
106
14

Progressive increase in mtDNA 3243A>G heteroplasmy causes abrupt transcriptional reprogramming.
Martin Picard, Jiangwen Zhang, Saege Hancock, Olga Derbeneva, Ryan Golhar, Pawel Golik, Sean O'Hearn, Shawn Levy, Prasanth Potluri, Maria Lvova,[...]. Proc Natl Acad Sci U S A 2014
167
14

Precise determination of mitochondrial DNA copy number in human skeletal and cardiac muscle by a PCR-based assay: lack of change of copy number with age.
Francis J Miller, Franklin L Rosenfeldt, Chunfang Zhang, Anthony W Linnane, Phillip Nagley. Nucleic Acids Res 2003
221
14

Association of Mitochondrial DNA Copy Number With Cardiovascular Disease.
Foram N Ashar, Yiyi Zhang, Ryan J Longchamps, John Lane, Anna Moes, Megan L Grove, Josyf C Mychaleckyj, Kent D Taylor, Josef Coresh, Jerome I Rotter,[...]. JAMA Cardiol 2017
99
14

DNA isolation protocol effects on nuclear DNA analysis by microarrays, droplet digital PCR, and whole genome sequencing, and on mitochondrial DNA copy number estimation.
Elizabeth Nacheva, Katya Mokretar, Aynur Soenmez, Alan M Pittman, Colin Grace, Roberto Valli, Ayesha Ejaz, Selina Vattathil, Emanuela Maserati, Henry Houlden,[...]. PLoS One 2017
19
26


In D-loop: 40 years of mitochondrial 7S DNA.
Thomas J Nicholls, Michal Minczuk. Exp Gerontol 2014
128
11

Absolute quantification by droplet digital PCR versus analog real-time PCR.
Christopher M Hindson, John R Chevillet, Hilary A Briggs, Emily N Gallichotte, Ingrid K Ruf, Benjamin J Hindson, Robert L Vessella, Muneesh Tewari. Nat Methods 2013
745
11

Quantification of mitochondrial DNA copy number: pre-analytical factors.
Antonio L Andreu, Ramiro Martinez, Ramon Marti, Elena García-Arumí. Mitochondrion 2009
94
11


Quantification of mitochondrial DNA copy number in suspected cancer patients by a well optimized ddPCR method.
Ashfaque A Memon, Bengt Zöller, Anna Hedelius, Xiao Wang, Emelie Stenman, Jan Sundquist, Kristina Sundquist. Biomol Detect Quantif 2017
32
12

Association of mitochondrial DNA levels with frailty and all-cause mortality.
Foram N Ashar, Anna Moes, Ann Z Moore, Megan L Grove, Paulo H M Chaves, Josef Coresh, Anne B Newman, Amy M Matteini, Karen Bandeen-Roche, Eric Boerwinkle,[...]. J Mol Med (Berl) 2015
101
11

Mitochondrial transcription factor A is necessary for mtDNA maintenance and embryogenesis in mice.
N G Larsson, J Wang, H Wilhelmsson, A Oldfors, P Rustin, M Lewandoski, G S Barsh, D A Clayton. Nat Genet 1998
11

Droplet digital PCR shows the D-Loop to be an error prone locus for mitochondrial DNA copy number determination.
Brian Li, Sonal Kaushik, Pola Kalinowski, BaRun Kim, Cynthia Gershome, Joyce Ching, Damon Poburko. Sci Rep 2018
10
40

Mitochondrial diseases.
Gráinne S Gorman, Patrick F Chinnery, Salvatore DiMauro, Michio Hirano, Yasutoshi Koga, Robert McFarland, Anu Suomalainen, David R Thorburn, Massimo Zeviani, Douglass M Turnbull. Nat Rev Dis Primers 2016
522
11

Mitochondrial DNA depletion, mitochondrial mutations and high TFAM expression in hepatocellular carcinoma.
Lihua Qiao, Guoqing Ru, Zhuochao Mao, Chenghui Wang, Zhipeng Nie, Qiang Li, Yiyi Huang-Yang, Ling Zhu, Xiaoyang Liang, Jialing Yu,[...]. Oncotarget 2017
13
30

Thinking outside the nucleus: Mitochondrial DNA copy number in health and disease.
Christina A Castellani, Ryan J Longchamps, Jing Sun, Eliseo Guallar, Dan E Arking. Mitochondrion 2020
42
11

ROS-generating mitochondrial DNA mutations can regulate tumor cell metastasis.
Kaori Ishikawa, Keizo Takenaga, Miho Akimoto, Nobuko Koshikawa, Aya Yamaguchi, Hirotake Imanishi, Kazuto Nakada, Yoshio Honma, Jun-Ichi Hayashi. Science 2008
922
8

Mitochondrial DNA-deletion mutations accumulate intracellularly to detrimental levels in aged human skeletal muscle fibers.
Entela Bua, Jody Johnson, Allen Herbst, Bridget Delong, Debbie McKenzie, Shahriar Salamat, Judd M Aiken. Am J Hum Genet 2006
284
8

DNA deletions and clonal mutations drive premature aging in mitochondrial mutator mice.
Marc Vermulst, Jonathan Wanagat, Gregory C Kujoth, Jason H Bielas, Peter S Rabinovitch, Tomas A Prolla, Lawrence A Loeb. Nat Genet 2008
275
8

Sequence and organization of the human mitochondrial genome.
S Anderson, A T Bankier, B G Barrell, M H de Bruijn, A R Coulson, J Drouin, I C Eperon, D P Nierlich, B A Roe, F Sanger,[...]. Nature 1981
8


Mammalian Mitochondria and Aging: An Update.
Timo E S Kauppila, Johanna H K Kauppila, Nils-Göran Larsson. Cell Metab 2017
267
8

Mitochondrial DNA: the overlooked oncogenome?
Payam A Gammage, Christian Frezza. BMC Biol 2019
54
8

The hallmarks of aging.
Carlos López-Otín, Maria A Blasco, Linda Partridge, Manuel Serrano, Guido Kroemer. Cell 2013
8

The Mitochondrial Basis of Aging.
Nuo Sun, Richard J Youle, Toren Finkel. Mol Cell 2016
577
8

Mitochondrial fission, fusion, and stress.
Richard J Youle, Alexander M van der Bliek. Science 2012
8

Mitochondrial DNA mutations, oxidative stress, and apoptosis in mammalian aging.
G C Kujoth, A Hiona, T D Pugh, S Someya, K Panzer, S E Wohlgemuth, T Hofer, A Y Seo, R Sullivan, W A Jobling,[...]. Science 2005
8

Mitochondrial DNA mutations in human disease.
Robert W Taylor, Doug M Turnbull. Nat Rev Genet 2005
8


Reference Intervals of Mitochondrial DNA Copy Number in Peripheral Blood for Chinese Minors and Adults.
Chang-Yu Xia, Yu Liu, Hui-Rong Yang, Hong-Yun Yang, Jing-Xia Liu, Yi-Nan Ma, Yu Qi. Chin Med J (Engl) 2017
16
18

High-throughput droplet digital PCR system for absolute quantitation of DNA copy number.
Benjamin J Hindson, Kevin D Ness, Donald A Masquelier, Phillip Belgrader, Nicholas J Heredia, Anthony J Makarewicz, Isaac J Bright, Michael Y Lucero, Amy L Hiddessen, Tina C Legler,[...]. Anal Chem 2011
8

Mitochondrial copy number is associated with colorectal cancer risk.
Bharat Thyagarajan, Renwei Wang, Helene Barcelo, Woon-Puay Koh, Jian-Min Yuan. Cancer Epidemiol Biomarkers Prev 2012
67
8

Mitochondrial threshold effects.
Rodrigue Rossignol, Benjamin Faustin, Christophe Rocher, Monique Malgat, Jean-Pierre Mazat, Thierry Letellier. Biochem J 2003
477
8


Generation of Rho Zero Cells: Visualization and Quantification of the mtDNA Depletion Process.
Susanna Schubert, Sandra Heller, Birgit Löffler, Ingo Schäfer, Martina Seibel, Gaetano Villani, Peter Seibel. Int J Mol Sci 2015
13
23

Super-resolution microscopy reveals that mammalian mitochondrial nucleoids have a uniform size and frequently contain a single copy of mtDNA.
Christian Kukat, Christian A Wurm, Henrik Spåhr, Maria Falkenberg, Nils-Göran Larsson, Stefan Jakobs. Proc Natl Acad Sci U S A 2011
312
8


Mitochondrial DNA copy number is associated with mortality and infections in a large cohort of patients with chronic kidney disease.
Federica Fazzini, Claudia Lamina, Liane Fendt, Ulla T Schultheiss, Fruzsina Kotsis, Andrew A Hicks, Heike Meiselbach, Hansi Weissensteiner, Lukas Forer, Vera Krane,[...]. Kidney Int 2019
29
10

Correlates of Peripheral Blood Mitochondrial DNA Content in a General Population.
Judita Knez, Ellen Winckelmans, Michelle Plusquin, Lutgarde Thijs, Nicholas Cauwenberghs, Yumei Gu, Jan A Staessen, Tim S Nawrot, Tatiana Kuznetsova. Am J Epidemiol 2016
59
8

Assessing Mitochondrial DNA Variation and Copy Number in Lymphocytes of ~2,000 Sardinians Using Tailored Sequencing Analysis Tools.
Jun Ding, Carlo Sidore, Thomas J Butler, Mary Kate Wing, Yong Qian, Osorio Meirelles, Fabio Busonero, Lam C Tsoi, Andrea Maschio, Andrea Angius,[...]. PLoS Genet 2015
65
8

The mitochondrial DNA 4,977-bp deletion and its implication in copy number alteration in colorectal cancer.
Tao Chen, Jing He, Lijun Shen, Hezhi Fang, Hezhongrong Nie, Tao Jin, Xiaosong Wei, Yijuan Xin, Yulin Jiang, Hongzhi Li,[...]. BMC Med Genet 2011
87
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.