A citation-based method for searching scientific literature

Vladimir Kirkin, Vladimir V Rogov. Mol Cell 2019
Times Cited: 184







List of co-cited articles
1134 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Cargo recognition and degradation by selective autophagy.
Damián Gatica, Vikramjit Lahiri, Daniel J Klionsky. Nat Cell Biol 2018
487
23

Mechanism and medical implications of mammalian autophagy.
Ivan Dikic, Zvulun Elazar. Nat Rev Mol Cell Biol 2018
21


Mechanisms governing autophagosome biogenesis.
Hitoshi Nakatogawa. Nat Rev Mol Cell Biol 2020
185
21

Spatiotemporal Control of ULK1 Activation by NDP52 and TBK1 during Selective Autophagy.
Jose Norberto S Vargas, Chunxin Wang, Eric Bunker, Ling Hao, Dragan Maric, Giampietro Schiavo, Felix Randow, Richard J Youle. Mol Cell 2019
185
19

The Cargo Receptor NDP52 Initiates Selective Autophagy by Recruiting the ULK Complex to Cytosol-Invading Bacteria.
Benjamin J Ravenhill, Keith B Boyle, Natalia von Muhlinen, Cara J Ellison, Glenn R Masson, Elsje G Otten, Agnes Foeglein, Roger Williams, Felix Randow. Mol Cell 2019
138
17

The role of Atg proteins in autophagosome formation.
Noboru Mizushima, Tamotsu Yoshimori, Yoshinori Ohsumi. Annu Rev Cell Dev Biol 2011
17

p62/SQSTM1 forms protein aggregates degraded by autophagy and has a protective effect on huntingtin-induced cell death.
Geir Bjørkøy, Trond Lamark, Andreas Brech, Heidi Outzen, Maria Perander, Aud Overvatn, Harald Stenmark, Terje Johansen. J Cell Biol 2005
16

FIP200 Claw Domain Binding to p62 Promotes Autophagosome Formation at Ubiquitin Condensates.
Eleonora Turco, Marie Witt, Christine Abert, Tobias Bock-Bierbaum, Ming-Yuan Su, Riccardo Trapannone, Martin Sztacho, Alberto Danieli, Xiaoshan Shi, Gabriele Zaffagnini,[...]. Mol Cell 2019
133
15

Regulation of endoplasmic reticulum turnover by selective autophagy.
Aliaksandr Khaminets, Theresa Heinrich, Muriel Mari, Paolo Grumati, Antje K Huebner, Masato Akutsu, Lutz Liebmann, Alexandra Stolz, Sandor Nietzsche, Nicole Koch,[...]. Nature 2015
492
15

p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagy.
Serhiy Pankiv, Terje Høyvarde Clausen, Trond Lamark, Andreas Brech, Jack-Ansgar Bruun, Heidi Outzen, Aud Øvervatn, Geir Bjørkøy, Terje Johansen. J Biol Chem 2007
14

Mechanisms of Selective Autophagy.
Gabriele Zaffagnini, Sascha Martens. J Mol Biol 2016
315
14

The ubiquitin kinase PINK1 recruits autophagy receptors to induce mitophagy.
Michael Lazarou, Danielle A Sliter, Lesley A Kane, Shireen A Sarraf, Chunxin Wang, Jonathon L Burman, Dionisia P Sideris, Adam I Fogel, Richard J Youle. Nature 2015
14

Ubiquitin-Dependent And Independent Signals In Selective Autophagy.
Aliaksandr Khaminets, Christian Behl, Ivan Dikic. Trends Cell Biol 2016
421
13

Cargo recognition and trafficking in selective autophagy.
Alexandra Stolz, Andreas Ernst, Ivan Dikic. Nat Cell Biol 2014
737
13

CCPG1 Is a Non-canonical Autophagy Cargo Receptor Essential for ER-Phagy and Pancreatic ER Proteostasis.
Matthew D Smith, Margaret E Harley, Alain J Kemp, Jimi Wills, Martin Lee, Mark Arends, Alex von Kriegsheim, Christian Behrends, Simon Wilkinson. Dev Cell 2018
199
13


Polyubiquitin chain-induced p62 phase separation drives autophagic cargo segregation.
Daxiao Sun, Rongbo Wu, Jingxiang Zheng, Pilong Li, Li Yu. Cell Res 2018
178
12

Phase separation organizes the site of autophagosome formation.
Yuko Fujioka, Jahangir Md Alam, Daisuke Noshiro, Kazunari Mouri, Toshio Ando, Yasushi Okada, Alexander I May, Roland L Knorr, Kuninori Suzuki, Yoshinori Ohsumi,[...]. Nature 2020
124
12

AMPK and mTOR regulate autophagy through direct phosphorylation of Ulk1.
Joungmok Kim, Mondira Kundu, Benoit Viollet, Kun-Liang Guan. Nat Cell Biol 2011
12


Intrinsically Disordered Protein TEX264 Mediates ER-phagy.
Haruka Chino, Tomohisa Hatta, Tohru Natsume, Noboru Mizushima. Mol Cell 2019
131
12

Full length RTN3 regulates turnover of tubular endoplasmic reticulum via selective autophagy.
Paolo Grumati, Giulio Morozzi, Soraya Hölper, Muriel Mari, Marie-Lena Ie Harwardt, Riqiang Yan, Stefan Müller, Fulvio Reggiori, Mike Heilemann, Ivan Dikic. Elife 2017
201
12

ATL3 Is a Tubular ER-Phagy Receptor for GABARAP-Mediated Selective Autophagy.
Qingzhou Chen, Ya Xiao, Peiyuan Chai, Pengli Zheng, Junlin Teng, Jianguo Chen. Curr Biol 2019
119
12

Receptor-mediated selective autophagy degrades the endoplasmic reticulum and the nucleus.
Keisuke Mochida, Yu Oikawa, Yayoi Kimura, Hiromi Kirisako, Hisashi Hirano, Yoshinori Ohsumi, Hitoshi Nakatogawa. Nature 2015
375
12

Mechanistic insights into selective autophagy pathways: lessons from yeast.
Jean-Claude Farré, Suresh Subramani. Nat Rev Mol Cell Biol 2016
216
12

The LIR motif - crucial for selective autophagy.
Åsa Birna Birgisdottir, Trond Lamark, Terje Johansen. J Cell Sci 2013
506
12

Phosphorylation of OPTN by TBK1 enhances its binding to Ub chains and promotes selective autophagy of damaged mitochondria.
Benjamin Richter, Danielle A Sliter, Lina Herhaus, Alexandra Stolz, Chunxin Wang, Petra Beli, Gabriele Zaffagnini, Philipp Wild, Sascha Martens, Sebastian A Wagner,[...]. Proc Natl Acad Sci U S A 2016
399
11

Selective autophagy mediated by autophagic adapter proteins.
Terje Johansen, Trond Lamark. Autophagy 2011
11

Autophagy in Human Diseases.
Noboru Mizushima, Beth Levine. N Engl J Med 2020
220
11


Translocon component Sec62 acts in endoplasmic reticulum turnover during stress recovery.
Fiorenza Fumagalli, Julia Noack, Timothy J Bergmann, Eduardo Cebollero, Giorgia Brambilla Pisoni, Elisa Fasana, Ilaria Fregno, Carmela Galli, Marisa Loi, Tatiana Soldà,[...]. Nat Cell Biol 2016
216
10

TEX264 Is an Endoplasmic Reticulum-Resident ATG8-Interacting Protein Critical for ER Remodeling during Nutrient Stress.
Heeseon An, Alban Ordureau, Joao A Paulo, Christopher J Shoemaker, Vladimir Denic, J Wade Harper. Mol Cell 2019
117
10

Atg9 is a lipid scramblase that mediates autophagosomal membrane expansion.
Kazuaki Matoba, Tetsuya Kotani, Akihisa Tsutsumi, Takuma Tsuji, Takaharu Mori, Daisuke Noshiro, Yuji Sugita, Norimichi Nomura, So Iwata, Yoshinori Ohsumi,[...]. Nat Struct Mol Biol 2020
102
10

p62 filaments capture and present ubiquitinated cargos for autophagy.
Gabriele Zaffagnini, Adriana Savova, Alberto Danieli, Julia Romanov, Shirley Tremel, Michael Ebner, Thomas Peterbauer, Martin Sztacho, Riccardo Trapannone, Abul K Tarafder,[...]. EMBO J 2018
156
9

ULK1 induces autophagy by phosphorylating Beclin-1 and activating VPS34 lipid kinase.
Ryan C Russell, Ye Tian, Haixin Yuan, Hyun Woo Park, Yu-Yun Chang, Joungmok Kim, Haerin Kim, Thomas P Neufeld, Andrew Dillin, Kun-Liang Guan. Nat Cell Biol 2013
941
9

Receptor-Bound Targets of Selective Autophagy Use a Scaffold Protein to Activate the Atg1 Kinase.
Roarke A Kamber, Christopher J Shoemaker, Vladimir Denic. Mol Cell 2015
82
10

Atg9 vesicles are an important membrane source during early steps of autophagosome formation.
Hayashi Yamamoto, Soichiro Kakuta, Tomonobu M Watanabe, Akira Kitamura, Takayuki Sekito, Chika Kondo-Kakuta, Rie Ichikawa, Masataka Kinjo, Yoshinori Ohsumi. J Cell Biol 2012
379
9

Phosphorylation of the autophagy receptor optineurin restricts Salmonella growth.
Philipp Wild, Hesso Farhan, David G McEwan, Sebastian Wagner, Vladimir V Rogov, Nathan R Brady, Benjamin Richter, Jelena Korac, Oliver Waidmann, Chunaram Choudhary,[...]. Science 2011
881
9


CALCOCO1 acts with VAMP-associated proteins to mediate ER-phagy.
Thaddaeus Mutugi Nthiga, Birendra Kumar Shrestha, Eva Sjøttem, Jack-Ansgar Bruun, Kenneth Bowitz Larsen, Zambarlal Bhujabal, Trond Lamark, Terje Johansen. EMBO J 2020
48
18

Molecular definitions of autophagy and related processes.
Lorenzo Galluzzi, Eric H Baehrecke, Andrea Ballabio, Patricia Boya, José Manuel Bravo-San Pedro, Francesco Cecconi, Augustine M Choi, Charleen T Chu, Patrice Codogno, Maria Isabel Colombo,[...]. EMBO J 2017
820
9


WIPI2 links LC3 conjugation with PI3P, autophagosome formation, and pathogen clearance by recruiting Atg12-5-16L1.
Hannah C Dooley, Minoo Razi, Hannah E J Polson, Stephen E Girardin, Michael I Wilson, Sharon A Tooze. Mol Cell 2014
437
9

The coming of age of chaperone-mediated autophagy.
Susmita Kaushik, Ana Maria Cuervo. Nat Rev Mol Cell Biol 2018
467
9

Structure, lipid scrambling activity and role in autophagosome formation of ATG9A.
Shintaro Maeda, Hayashi Yamamoto, Lisa N Kinch, Christina M Garza, Satoru Takahashi, Chinatsu Otomo, Nick V Grishin, Stefano Forli, Noboru Mizushima, Takanori Otomo. Nat Struct Mol Biol 2020
78
11

Diverse Cellular Roles of Autophagy.
Hideaki Morishita, Noboru Mizushima. Annu Rev Cell Dev Biol 2019
126
9

ER-Phagy: Quality Control and Turnover of Endoplasmic Reticulum.
Haruka Chino, Noboru Mizushima. Trends Cell Biol 2020
77
11

LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing.
Y Kabeya, N Mizushima, T Ueno, A Yamamoto, T Kirisako, T Noda, E Kominami, Y Ohsumi, T Yoshimori. EMBO J 2000
9



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.