Ashraya Ravikumar, Chandrasekharan Ramakrishnan, Narayanaswamy Srinivasan. Structure 2019
Times Cited: 7
Times Cited: 7
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Stereochemistry of polypeptide chain configurations.
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Conformational Strain Indicated by Ramachandran Angles for the Protein Backbone Is Only Weakly Related to the Flexibility.
Ashraya Ravikumar, Alexandre G de Brevern, Narayanaswamy Srinivasan. J Phys Chem B 2021
Ashraya Ravikumar, Alexandre G de Brevern, Narayanaswamy Srinivasan. J Phys Chem B 2021
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Investigations of Ramachandran disallowed conformations in protein domain families.
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28
Protein flexibility and rigidity predicted from sequence.
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A Src-like inactive conformation in the abl tyrosine kinase domain.
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Identification of a hidden strain switch provides clues to an ancient structural mechanism in protein kinases.
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Structural modes of stabilization of permissive phosphorylation sites in protein kinases: distinct strategies in Ser/Thr and Tyr kinases.
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28
Structural compromise of disallowed conformations in peptide and protein structures.
C Ramakrishnan, B Lakshmi, A Kurien, D Devipriya, N Srinivasan. Protein Pept Lett 2007
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28
On residues in the disallowed region of the Ramachandran map.
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Hypervariability of accessible and inaccessible conformational space of proteins.
Ashraya Ravikumar, Narayanaswamy Srinivasan. Curr Res Struct Biol 2021
Ashraya Ravikumar, Narayanaswamy Srinivasan. Curr Res Struct Biol 2021
100
Bioinformatic and mutational studies of related toxin-antitoxin pairs in Mycobacterium tuberculosis predict and identify key functional residues.
Himani Tandon, Arun Sharma, Saruchi Wadhwa, Raghavan Varadarajan, Ramandeep Singh, Narayanaswamy Srinivasan, Sankaran Sandhya. J Biol Chem 2019
Himani Tandon, Arun Sharma, Saruchi Wadhwa, Raghavan Varadarajan, Ramandeep Singh, Narayanaswamy Srinivasan, Sankaran Sandhya. J Biol Chem 2019
28
SInCRe-structural interactome computational resource for Mycobacterium tuberculosis.
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Reliability of atomic displacement parameters in protein crystal structures.
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On the correlation between the main-chain and side-chain atomic displacement parameters (B values) in high-resolution protein structures.
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The Pfam protein families database in 2019.
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Protein allostery, signal transmission and dynamics: a classification scheme of allosteric mechanisms.
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Analysis of temperature factor distribution in high-resolution protein structures.
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A helix scaffold for the assembly of active protein kinases.
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A Gaussian network model study suggests that structural fluctuations are higher for inactive states than active states of protein kinases.
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14
Localizing frustration in native proteins and protein assemblies.
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Dynamic coupling between the SH2 and SH3 domains of c-Src and Hck underlies their inactivation by C-terminal tyrosine phosphorylation.
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Factors Stabilizing β-Sheets in Protein Structures from a Quantum-Chemical Perspective.
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