A citation-based method for searching scientific literature

Matthew Ravalin, Koli Basu, Jason E Gestwicki, Charles S Craik. ACS Chem Biol 2021
Times Cited: 4







List of co-cited articles
4 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


N-degron and C-degron pathways of protein degradation.
Alexander Varshavsky. Proc Natl Acad Sci U S A 2019
221
50

The Eukaryotic Proteome Is Shaped by E3 Ubiquitin Ligases Targeting C-Terminal Degrons.
Itay Koren, Richard T Timms, Tomasz Kula, Qikai Xu, Mamie Z Li, Stephen J Elledge. Cell 2018
102
50

Specificity for latent C termini links the E3 ubiquitin ligase CHIP to caspases.
Matthew Ravalin, Panagiotis Theofilas, Koli Basu, Kwadwo A Opoku-Nsiah, Victoria A Assimon, Daniel Medina-Cleghorn, Yi-Fan Chen, Markus F Bohn, Michelle Arkin, Lea T Grinberg,[...]. Nat Chem Biol 2019
29
50

A glycine-specific N-degron pathway mediates the quality control of protein N-myristoylation.
Richard T Timms, Zhiqian Zhang, David Y Rhee, J Wade Harper, Itay Koren, Stephen J Elledge. Science 2019
66
50

Chemical library screening using a SPR-based inhibition in solution assay: simulations and experimental validation.
Laurence Choulier, Yves Nominé, Gabrielle Zeder-Lutz, Sebastian Charbonnier, Bruno Didier, Marie-Louise Jung, Danièle Altschuh. Anal Chem 2013
10
25



Emergent properties of proteostasis in managing cystic fibrosis.
William E Balch, Daniela M Roth, Darren M Hutt. Cold Spring Harb Perspect Biol 2011
66
25

The Ubiquitin Ligase CHIP Integrates Proteostasis and Aging by Regulation of Insulin Receptor Turnover.
Riga Tawo, Wojciech Pokrzywa, Éva Kevei, Melek E Akyuz, Vishnu Balaji, Svenja Adrian, Jörg Höhfeld, Thorsten Hoppe. Cell 2017
74
25

Direct and Propagated Effects of Small Molecules on Protein-Protein Interaction Networks.
Laura C Cesa, Anna K Mapp, Jason E Gestwicki. Front Bioeng Biotechnol 2015
39
25

CHIP is a chaperone-dependent E3 ligase that ubiquitylates unfolded protein.
S Murata, Y Minami, M Minami, T Chiba, K Tanaka. EMBO Rep 2001
427
25

Anatomy of β-strands at protein-protein interfaces.
Andrew M Watkins, Paramjit S Arora. ACS Chem Biol 2014
70
25

Unexpected modes of PDZ domain scaffolding revealed by structure of nNOS-syntrophin complex.
B J Hillier, K S Christopherson, K E Prehoda, D S Bredt, W A Lim. Science 1999
426
25

Using fragment-based technologies to target protein-protein interactions.
Justin F Bower, Andrew Pannifer. Curr Pharm Des 2012
21
25

Phase I trial of 17-dimethylaminoethylamino-17-demethoxygeldanamycin (17-DMAG), a heat shock protein inhibitor, administered twice weekly in patients with advanced malignancies.
Shivaani Kummar, Martin E Gutierrez, Erin R Gardner, Xiaohong Chen, William D Figg, Maria Zajac-Kaye, Min Chen, Seth M Steinberg, Christine A Muir, Mary Ann Yancey,[...]. Eur J Cancer 2010
96
25

Validation of the Hsp70-Bag3 protein-protein interaction as a potential therapeutic target in cancer.
Xiaokai Li, Teresa Colvin, Jennifer N Rauch, Diego Acosta-Alvear, Martin Kampmann, Bryan Dunyak, Byron Hann, Blake T Aftab, Megan Murnane, Min Cho,[...]. Mol Cancer Ther 2015
77
25


Structure of TPR domain-peptide complexes: critical elements in the assembly of the Hsp70-Hsp90 multichaperone machine.
C Scheufler, A Brinker, G Bourenkov, S Pegoraro, L Moroder, H Bartunik, F U Hartl, I Moarefi. Cell 2000
949
25

An Effective Strategy for Stabilizing Minimal Coiled Coil Mimetics.
Michael G Wuo, Andrew B Mahon, Paramjit S Arora. J Am Chem Soc 2015
46
25

Macrocycles that inhibit the binding between heat shock protein 90 and TPR-containing proteins.
Veronica C Ardi, Leslie D Alexander, Victoria A Johnson, Shelli R McAlpine. ACS Chem Biol 2011
51
25

Enzymatic assembly of DNA molecules up to several hundred kilobases.
Daniel G Gibson, Lei Young, Ray-Yuan Chuang, J Craig Venter, Clyde A Hutchison, Hamilton O Smith. Nat Methods 2009
25

Hsp70 and DNAJA2 limit CFTR levels through degradation.
Patrick Kim Chiaw, Christine Hantouche, Michael J H Wong, Elizabeth Matthes, Renaud Robert, John W Hanrahan, Alvin Shrier, Jason C Young. PLoS One 2019
12
25

Rational design and screening of peptide-based inhibitors of heat shock factor 1 (HSF1).
Xu Ran, Eileen T Burchfiel, Bushu Dong, Nicholas J Rettko, Bryan M Dunyak, Hao Shao, Dennis J Thiele, Jason E Gestwicki. Bioorg Med Chem 2018
8
25

Proteostasis by STUB1/HSP70 complex controls sensitivity to androgen receptor targeted therapy in advanced prostate cancer.
Chengfei Liu, Wei Lou, Joy C Yang, Liangren Liu, Cameron M Armstrong, Alan P Lombard, Ruining Zhao, Onika D V Noel, Clifford G Tepper, Hong-Wu Chen,[...]. Nat Commun 2018
45
25


Modulating protein-protein interaction networks in protein homeostasis.
Mengqi Zhong, Gregory M Lee, Eline Sijbesma, Christian Ottmann, Michelle R Arkin. Curr Opin Chem Biol 2019
25
25

Exploration of Benzothiazole Rhodacyanines as Allosteric Inhibitors of Protein-Protein Interactions with Heat Shock Protein 70 (Hsp70).
Hao Shao, Xiaokai Li, Michael A Moses, Luke A Gilbert, Chakrapani Kalyanaraman, Zapporah T Young, Margarita Chernova, Sara N Journey, Jonathan S Weissman, Byron Hann,[...]. J Med Chem 2018
54
25

Protein-Protein Interactions Mediated by Helical Tertiary Structure Motifs.
Andrew M Watkins, Michael G Wuo, Paramjit S Arora. J Am Chem Soc 2015
45
25

Hsp90 and Hsp70 chaperones: Collaborators in protein remodeling.
Olivier Genest, Sue Wickner, Shannon M Doyle. J Biol Chem 2019
128
25

Ligand binding by TPR domains.
Aitziber L Cortajarena, Lynne Regan. Protein Sci 2006
71
25

Chaperoned ubiquitylation--crystal structures of the CHIP U box E3 ubiquitin ligase and a CHIP-Ubc13-Uev1a complex.
Minghao Zhang, Mark Windheim, S Mark Roe, Mark Peggie, Philip Cohen, Chrisostomos Prodromou, Laurence H Pearl. Mol Cell 2005
326
25

Modulators of 14-3-3 Protein-Protein Interactions.
Loes M Stevers, Eline Sijbesma, Maurizio Botta, Carol MacKintosh, Tomas Obsil, Isabelle Landrieu, Ylenia Cau, Andrew J Wilson, Anna Karawajczyk, Jan Eickhoff,[...]. J Med Chem 2018
124
25

Chemical manipulation of hsp70 ATPase activity regulates tau stability.
Umesh K Jinwal, Yoshinari Miyata, John Koren, Jeffrey R Jones, Justin H Trotter, Lyra Chang, John O'Leary, David Morgan, Daniel C Lee, Cody L Shults,[...]. J Neurosci 2009
175
25

CHIP is a U-box-dependent E3 ubiquitin ligase: identification of Hsc70 as a target for ubiquitylation.
J Jiang, C A Ballinger, Y Wu, Q Dai, D M Cyr, J Höhfeld, C Patterson. J Biol Chem 2001
460
25

NanoLuc Complementation Reporter Optimized for Accurate Measurement of Protein Interactions in Cells.
Andrew S Dixon, Marie K Schwinn, Mary P Hall, Kris Zimmerman, Paul Otto, Thomas H Lubben, Braeden L Butler, Brock F Binkowski, Thomas Machleidt, Thomas A Kirkland,[...]. ACS Chem Biol 2016
511
25

A Decade of Boon or Burden: What Has the CHIP Ever Done for Cellular Protein Quality Control Mechanism Implicated in Neurodegeneration and Aging?
Vibhuti Joshi, Ayeman Amanullah, Arun Upadhyay, Ribhav Mishra, Amit Kumar, Amit Mishra. Front Mol Neurosci 2016
40
25

Engineering a ubiquitin ligase reveals conformational flexibility required for ubiquitin transfer.
Shu-Bing Qian, Lauren Waldron, Neelima Choudhary, Rachel E Klevit, Walter J Chazin, Cam Patterson. J Biol Chem 2009
28
25

TRIM28 regulates the nuclear accumulation and toxicity of both alpha-synuclein and tau.
Maxime Wc Rousseaux, Maria de Haro, Cristian A Lasagna-Reeves, Antonia De Maio, Jeehye Park, Paymaan Jafar-Nejad, Ismael Al-Ramahi, Ajay Sharma, Lauren See, Nan Lu,[...]. Elife 2016
54
25

Imbalance of Hsp70 family variants fosters tau accumulation.
Umesh K Jinwal, Elias Akoury, Jose F Abisambra, John C O'Leary, Andrea D Thompson, Laura J Blair, Ying Jin, Justin Bacon, Bryce A Nordhues, Matthew Cockman,[...]. FASEB J 2013
84
25



A Multireporter Bacterial 2-Hybrid Assay for the High-Throughput and Dynamic Assay of PDZ Domain-Peptide Interactions.
David M Ichikawa, Carles Corbi-Verge, Michael J Shen, Jamie Snider, Victoria Wong, Igor Stagljar, Philip M Kim, Marcus B Noyes. ACS Synth Biol 2019
5
25


Hsp70:CHIP Ubiquitinates Dysfunctional but Not Native Neuronal NO Synthase.
Amanda K Davis, Natalie F McMyn, Miranda Lau, Yoshihiro Morishima, Yoichi Osawa. Mol Pharmacol 2020
3
33

Development and optimization of a binding assay for the XIAP BIR3 domain using fluorescence polarization.
Zaneta Nikolovska-Coleska, Renxiao Wang, Xueliang Fang, Hongguang Pan, York Tomita, Peng Li, Peter P Roller, Krzysztof Krajewski, Naoyuki G Saito, Jeanne A Stuckey,[...]. Anal Biochem 2004
387
25


Synthesis and evaluation of biotinylated sansalvamide A analogs and their modulation of Hsp90.
Joseph B Kunicki, Mark N Petersen, Leslie D Alexander, Veronica C Ardi, Jeanette R McConnell, Shelli R McAlpine. Bioorg Med Chem Lett 2011
26
25

Role of electrostatic interactions in PDZ domain ligand recognition.
Baruch Z Harris, Francis W Lau, Naoaki Fujii, R Kiplin Guy, Wendell A Lim. Biochemistry 2003
40
25

A High-Throughput Screening Strategy to Identify Inhibitors of SSB Protein-Protein Interactions in an Academic Screening Facility.
Andrew F Voter, Michael P Killoran, Gene E Ananiev, Scott A Wildman, F Michael Hoffmann, James L Keck. SLAS Discov 2018
13
25



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.