A citation-based method for searching scientific literature

Mai Kanazawa, Yoko Ikeda, Ryuichi Nishihama, Shohei Yamaoka, Nam-Hee Lee, Katsuyuki T Yamato, Takayuki Kohchi, Takashi Hirayama. Plant Cell Physiol 2020
Times Cited: 2







List of co-cited articles
4 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Pentatricopeptide repeat proteins in plants.
Alice Barkan, Ian Small. Annu Rev Plant Biol 2014
476
100

Mapping of mitochondrial mRNA termini in Arabidopsis thaliana: t-elements contribute to 5' and 3' end formation.
Joachim Forner, Bärbel Weber, Sabine Thuss, Steffen Wildum, Stefan Binder. Nucleic Acids Res 2007
92
100

A poly(A)-specific ribonuclease directly regulates the poly(A) status of mitochondrial mRNA in Arabidopsis.
Takashi Hirayama, Takakazu Matsuura, Sho Ushiyama, Mari Narusaka, Yukio Kurihara, Michiko Yasuda, Misato Ohtani, Motoaki Seki, Taku Demura, Hideo Nakashita,[...]. Nat Commun 2013
26
100

mRNA deadenylation by PARN is essential for embryogenesis in higher plants.
Sergei V Reverdatto, James A Dutko, Julia A Chekanova, Douglas A Hamilton, Dmitry A Belostotsky. RNA 2004
65
100

mRNA decay in plants: both quantity and quality matter.
Xinyan Zhang, Hongwei Guo. Curr Opin Plant Biol 2017
24
50

Systematic analysis of plant mitochondrial and chloroplast small RNAs suggests organelle-specific mRNA stabilization mechanisms.
Hannes Ruwe, Gongwei Wang, Sandra Gusewski, Christian Schmitz-Linneweber. Nucleic Acids Res 2016
34
50


Cell growth and homeostasis are disrupted in arabidopsis rns2-2 mutants missing the main vacuolar RNase activity.
Stephanie C Morriss, Xiaoyi Liu, Brice E Floyd, Diane C Bassham, Gustavo C MacIntosh. Ann Bot 2017
6
50

Arabidopsis chloroplast quantitative editotype.
Hannes Ruwe, Benoit Castandet, Christian Schmitz-Linneweber, David B Stern. FEBS Lett 2013
57
50

AtPARN is an essential poly(A) ribonuclease in Arabidopsis.
Yukako Chiba, Mark A Johnson, Preetmoninder Lidder, Jonathan T Vogel, Harrie van Erp, Pamela J Green. Gene 2004
52
50

Integration of chloroplast nucleic acid metabolism into the phosphate deprivation response in Chlamydomonas reinhardtii.
Shlomit Yehudai-Resheff, Sara L Zimmer, Yutaka Komine, David B Stern. Plant Cell 2007
49
50

Eri1: a conserved enzyme at the crossroads of multiple RNA-processing pathways.
Molly F Thomas, Noelle D L'Etoile, K Mark Ansel. Trends Genet 2014
15
50



Arabidopsis mRNA decay landscape arises from specialized RNA decay substrates, decapping-mediated feedback, and redundancy.
Reed S Sorenson, Malia J Deshotel, Katrina Johnson, Frederick R Adler, Leslie E Sieburth. Proc Natl Acad Sci U S A 2018
23
50

Identification of stable, high copy number, medium-sized RNA degradation intermediates that accumulate in plants under non-stress conditions.
Martyna Nowacka, Pawel M Strozycki, Paulina Jackowiak, Anna Hojka-Osinska, Maciej Szymanski, Marek Figlerowicz. Plant Mol Biol 2013
27
50

Strand-specific RNA sequencing uncovers chloroplast ribonuclease functions.
Benoît Castandet, Amber M Hotto, Zhangjun Fei, David B Stern. FEBS Lett 2013
11
50


Chloroplast PNPase exists as a homo-multimer enzyme complex that is distinct from the Escherichia coli degradosome.
S Baginsky, A Shteiman-Kotler, V Liveanu, S Yehudai-Resheff, M Bellaoui, R E Settlage, J Shabanowitz, D F Hunt, G Schuster, W Gruissem. RNA 2001
68
50


Identification of genes required for embryo development in Arabidopsis.
Iris Tzafrir, Rosanna Pena-Muralla, Allan Dickerman, Michael Berg, Rebecca Rogers, Steven Hutchens, T Colleen Sweeney, John McElver, George Aux, David Patton,[...]. Plant Physiol 2004
318
50

Major 3'-5' Exoribonucleases in the Metabolism of Coding and Non-coding RNA.
Ricardo F Dos Santos, Ana P Quendera, Sofia Boavida, André F Seixas, Cecília M Arraiano, José M Andrade. Prog Mol Biol Transl Sci 2018
11
50


Zebrafish RNase T2 genes and the evolution of secretory ribonucleases in animals.
Melissa S Hillwig, Ludmila Rizhsky, Ying Wang, Alisa Umanskaya, Jeffrey J Essner, Gustavo C MacIntosh. BMC Evol Biol 2009
21
50



The conserved endoribonuclease YbeY is required for chloroplast ribosomal RNA processing in Arabidopsis.
Jinwen Liu, Wenbin Zhou, Guifeng Liu, Chuanping Yang, Yi Sun, Wenjuan Wu, Shenquan Cao, Chong Wang, Guanghui Hai, Zhifeng Wang,[...]. Plant Physiol 2015
31
50

RNase I regulates Escherichia coli 2',3'-cyclic nucleotide monophosphate levels and biofilm formation.
Benjamin M Fontaine, Kevin S Martin, Jennifer M Garcia-Rodriguez, Claire Jung, Laura Briggs, Jessica E Southwell, Xin Jia, Emily E Weinert. Biochem J 2018
13
50

RNS2: a senescence-associated RNase of Arabidopsis that diverged from the S-RNases before speciation.
C B Taylor, P A Bariola, S B delCardayré, R T Raines, P J Green. Proc Natl Acad Sci U S A 1993
176
50

Determination of protein-only RNase P interactome in Arabidopsis mitochondria and chloroplasts identifies a complex between PRORP1 and another NYN domain nuclease.
Ayoub Bouchoucha, Florent Waltz, Géraldine Bonnard, Mathilde Arrivé, Philippe Hammann, Lauriane Kuhn, Cédric Schelcher, Hélène Zuber, Anthony Gobert, Philippe Giegé. Plant J 2019
2
50

A 125 kDa RNase E/G-like protein is present in plastids and is essential for chloroplast development and autotrophic growth in Arabidopsis.
Elisabeth A Mudd, Stuart Sullivan, Martin F Gisby, Aleksandr Mironov, Chang Seob Kwon, Won-Il Chung, Anil Day. J Exp Bot 2008
28
50

Analysis of ABA hypersensitive germination2 revealed the pivotal functions of PARN in stress response in Arabidopsis.
Noriyuki Nishimura, Nobutaka Kitahata, Motoaki Seki, Yoshihiro Narusaka, Mari Narusaka, Takashi Kuromori, Tadao Asami, Kazuo Shinozaki, Takashi Hirayama. Plant J 2005
91
50

Tracking the elusive 5' exonuclease activity of Chlamydomonas reinhardtii RNase J.
Anna Liponska, Ailar Jamalli, Richard Kuras, Loreto Suay, Enrico Garbe, Francis-André Wollman, Soumaya Laalami, Harald Putzer. Plant Mol Biol 2018
6
50

The E domain of CRR2 participates in sequence-specific recognition of RNA in plastids.
Hannes Ruwe, Bernard Gutmann, Christian Schmitz-Linneweber, Ian Small, Peter Kindgren. New Phytol 2019
9
50


Plant microRNAs: Biogenesis, Homeostasis, and Degradation.
Junli Wang, Jun Mei, Guodong Ren. Front Plant Sci 2019
56
50

RNA-stabilization factors in chloroplasts of vascular plants.
Nikolay Manavski, Lisa-Marie Schmid, Jörg Meurer. Essays Biochem 2018
22
50

NnSR1, a class III non-S-RNase specifically induced in Nicotiana alata under phosphate deficiency, is localized in endoplasmic reticulum compartments.
Hernán Rojas, Brice Floyd, Stephanie C Morriss, Diane Bassham, Gustavo C MacIntosh, Ariel Goldraij. Plant Sci 2015
4
50

Evidence for autophagy-dependent pathways of rRNA turnover in Arabidopsis.
Brice E Floyd, Stephanie C Morriss, Gustavo C MacIntosh, Diane C Bassham. Autophagy 2015
45
50


Mechanism of RNA stabilization and translational activation by a pentatricopeptide repeat protein.
Jana Prikryl, Margarita Rojas, Gadi Schuster, Alice Barkan. Proc Natl Acad Sci U S A 2011
169
50


A tRNA half modulates translation as stress response in Trypanosoma brucei.
Roger Fricker, Rebecca Brogli, Hannes Luidalepp, Leander Wyss, Michel Fasnacht, Oliver Joss, Marek Zywicki, Mark Helm, André Schneider, Marina Cristodero,[...]. Nat Commun 2019
44
50

ERIL1, the plant homologue of ERI-1, is involved in the processing of chloroplastic rRNAs.
Glykeria Mermigka, Jutta Maria Helm, Ioannis Vlatakis, Heiko Tobias Schumacher, Evgenia Vamvaka, Kriton Kalantidis. Plant J 2016
3
50


rnaset2 mutant zebrafish model familial cystic leukoencephalopathy and reveal a role for RNase T2 in degrading ribosomal RNA.
Noémie Haud, Firat Kara, Simone Diekmann, Marco Henneke, Jason R Willer, Melissa S Hillwig, Ronald G Gregg, Gustavo C Macintosh, Jutta Gärtner, A Alia,[...]. Proc Natl Acad Sci U S A 2011
63
50

tRNA-derived small RNAs target transposable element transcripts.
German Martinez, Sarah G Choudury, R Keith Slotkin. Nucleic Acids Res 2017
113
50

A tobacco S-like RNase inhibits hyphal elongation of plant pathogens.
Karine Hugot, Michel Ponchet, Antoine Marais, Pierre Ricci, Eric Galiana. Mol Plant Microbe Interact 2002
41
50

Filtering of deep sequencing data reveals the existence of abundant Dicer-dependent small RNAs derived from tRNAs.
Christian Cole, Andrew Sobala, Cheng Lu, Shawn R Thatcher, Andrew Bowman, John W S Brown, Pamela J Green, Geoffrey J Barton, Gyorgy Hutvagner. RNA 2009
385
50

Knockout of the plastid RNase E leads to defective RNA processing and chloroplast ribosome deficiency.
Michael Walter, Katrin Piepenburg, Mark Aurel Schöttler, Kerstin Petersen, Sabine Kahlau, Nadine Tiller, Oliver Drechsel, Magdalena Weingartner, Jörg Kudla, Ralph Bock. Plant J 2010
54
50


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.