A citation-based method for searching scientific literature

Kathrin Wolf, Dominic O'Neil, Stefanie Schroeer, Nan Fang. Curr Protoc Mol Biol 2016
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Review of current methods, applications, and data management for the bioinformatics analysis of whole exome sequencing.
Riyue Bao, Lei Huang, Jorge Andrade, Wei Tan, Warren A Kibbe, Hongmei Jiang, Gang Feng. Cancer Inform 2014
74
100

Accurate multiplex polony sequencing of an evolved bacterial genome.
Jay Shendure, Gregory J Porreca, Nikos B Reppas, Xiaoxia Lin, John P McCutcheon, Abraham M Rosenbaum, Michael D Wang, Kun Zhang, Robi D Mitra, George M Church. Science 2005
690
100

Roadmap for harmonization of clinical laboratory measurement procedures.
W Greg Miller, Gary L Myers, Mary Lou Gantzer, Stephen E Kahn, E Ralf Schönbrunner, Linda M Thienpont, David M Bunk, Robert H Christenson, John H Eckfeldt, Stanley F Lo,[...]. Clin Chem 2011
132
100

Guidelines on good clinical laboratory practice: bridging operations between research and clinical research laboratories.
J Ezzelle, I R Rodriguez-Chavez, J M Darden, M Stirewalt, N Kunwar, R Hitchcock, T Walter, M P D'Souza. J Pharm Biomed Anal 2008
67
100




Massively parallel sequencing: the next big thing in genetic medicine.
Tracy Tucker, Marco Marra, Jan M Friedman. Am J Hum Genet 2009
176
100


Pre-Analytical Considerations for Successful Next-Generation Sequencing (NGS): Challenges and Opportunities for Formalin-Fixed and Paraffin-Embedded Tumor Tissue (FFPE) Samples.
Gladys Arreaza, Ping Qiu, Ling Pang, Andrew Albright, Lewis Z Hong, Matthew J Marton, Diane Levitan. Int J Mol Sci 2016
27
100

Integrated Systems for NGS Data Management and Analysis: Open Issues and Available Solutions.
Valerio Bianchi, Arnaud Ceol, Alessandro G E Ogier, Stefano de Pretis, Eugenia Galeota, Kamal Kishore, Pranami Bora, Ottavio Croci, Stefano Campaner, Bruno Amati,[...]. Front Genet 2016
20
100

Next-generation sequencing of RNA and DNA isolated from paired fresh-frozen and formalin-fixed paraffin-embedded samples of human cancer and normal tissue.
Jakob Hedegaard, Kasper Thorsen, Mette Katrine Lund, Anne-Mette K Hein, Stephen Jacques Hamilton-Dutoit, Søren Vang, Iver Nordentoft, Karin Birkenkamp-Demtröder, Mogens Kruhøffer, Henrik Hager,[...]. PLoS One 2014
183
100

Systematic analysis of genotype-specific drug responses in cancer.
Nayoung Kim, Ningning He, Changsik Kim, Fan Zhang, Yiling Lu, Qinghua Yu, Katherine Stemke-Hale, Joel Greshock, Richard Wooster, Sukjoon Yoon,[...]. Int J Cancer 2012
25
100



Tissue recommendations for precision cancer therapy using next generation sequencing: a comprehensive single cancer center's experiences.
Minho Cho, Soomin Ahn, Mineui Hong, Heejin Bang, Michael Van Vrancken, Seungtae Kim, Jeeyun Lee, Se Hoon Park, Joon Oh Park, Young Suk Park,[...]. Oncotarget 2017
13
100

Genome sequencing in microfabricated high-density picolitre reactors.
Marcel Margulies, Michael Egholm, William E Altman, Said Attiya, Joel S Bader, Lisa A Bemben, Jan Berka, Michael S Braverman, Yi-Ju Chen, Zhoutao Chen,[...]. Nature 2005
100

Good laboratory practice for clinical next-generation sequencing informatics pipelines.
Amy S Gargis, Lisa Kalman, David P Bick, Cristina da Silva, David P Dimmock, Birgit H Funke, Sivakumar Gowrisankar, Madhuri R Hegde, Shashikant Kulkarni, Christopher E Mason,[...]. Nat Biotechnol 2015
80
100


Guidelines for Validation of Next-Generation Sequencing-Based Oncology Panels: A Joint Consensus Recommendation of the Association for Molecular Pathology and College of American Pathologists.
Lawrence J Jennings, Maria E Arcila, Christopher Corless, Suzanne Kamel-Reid, Ira M Lubin, John Pfeifer, Robyn L Temple-Smolkin, Karl V Voelkerding, Marina N Nikiforova. J Mol Diagn 2017
210
100


Next generation sequencing of SNPs for non-invasive prenatal diagnosis: challenges and feasibility as illustrated by an application to β-thalassaemia.
Thessalia Papasavva, Wilfred F J van Ijcken, Christel E M Kockx, Mirjam C G N van den Hout, Petros Kountouris, Loukas Kythreotis, Eleni Kalogirou, Frank G Grosveld, Marina Kleanthous. Eur J Hum Genet 2013
29
100

Assuring the quality of next-generation sequencing in clinical laboratory practice.
Amy S Gargis, Lisa Kalman, Meredith W Berry, David P Bick, David P Dimmock, Tina Hambuch, Fei Lu, Elaine Lyon, Karl V Voelkerding, Barbara A Zehnbauer,[...]. Nat Biotechnol 2012
295
100

Clinical Next Generation Sequencing for Precision Medicine in Cancer.
Ling Dong, Wanheng Wang, Alvin Li, Rina Kansal, Yuhan Chen, Hong Chen, Xinmin Li. Curr Genomics 2015
37
100


Bioinformatics for next generation sequencing data.
Alberto Magi, Matteo Benelli, Alessia Gozzini, Francesca Girolami, Francesca Torricelli, Maria Luisa Brandi. Genes (Basel) 2010
32
100

Reference standards for next-generation sequencing.
Simon A Hardwick, Ira W Deveson, Tim R Mercer. Nat Rev Genet 2017
88
100

Sequencing technologies - the next generation.
Michael L Metzker. Nat Rev Genet 2010
100

Guidelines for diagnostic next-generation sequencing.
Gert Matthijs, Erika Souche, Mariëlle Alders, Anniek Corveleyn, Sebastian Eck, Ilse Feenstra, Valérie Race, Erik Sistermans, Marc Sturm, Marjan Weiss,[...]. Eur J Hum Genet 2016
212
100


Standards and Guidelines for the Interpretation and Reporting of Sequence Variants in Cancer: A Joint Consensus Recommendation of the Association for Molecular Pathology, American Society of Clinical Oncology, and College of American Pathologists.
Marilyn M Li, Michael Datto, Eric J Duncavage, Shashikant Kulkarni, Neal I Lindeman, Somak Roy, Apostolia M Tsimberidou, Cindy L Vnencak-Jones, Daynna J Wolff, Anas Younes,[...]. J Mol Diagn 2017
468
100

Exploring the Link between the Germline and Somatic Genome in Cancer.
Paul Geeleher, R Stephanie Huang. Cancer Discov 2017
5
100

Non-Small Cell Lung Cancer, Version 5.2017, NCCN Clinical Practice Guidelines in Oncology.
David S Ettinger, Douglas E Wood, Dara L Aisner, Wallace Akerley, Jessica Bauman, Lucian R Chirieac, Thomas A D'Amico, Malcolm M DeCamp, Thomas J Dilling, Michael Dobelbower,[...]. J Natl Compr Canc Netw 2017
630
100

Clinical application of next-generation sequencing for Mendelian diseases.
Saumya Shekhar Jamuar, Ene-Choo Tan. Hum Genomics 2015
51
100

Recommended practice for laboratory reporting of non-invasive prenatal testing of trisomies 13, 18 and 21: a consensus opinion.
Zandra C Deans, Stephanie Allen, Lucy Jenkins, Farrah Khawaja, Ros J Hastings, Kathy Mann, Simon J Patton, Erik A Sistermans, Lyn S Chitty. Prenat Diagn 2017
10
100

A standardized framework for the validation and verification of clinical molecular genetic tests.
Christopher J Mattocks, Michael A Morris, Gert Matthijs, Elfriede Swinnen, Anniek Corveleyn, Els Dequeker, Clemens R Müller, Victoria Pratt, Andrew Wallace. Eur J Hum Genet 2010
104
100

Library construction for next-generation sequencing: overviews and challenges.
Steven R Head, H Kiyomi Komori, Sarah A LaMere, Thomas Whisenant, Filip Van Nieuwerburgh, Daniel R Salomon, Phillip Ordoukhanian. Biotechniques 2014
228
100

ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing.
Robert C Green, Jonathan S Berg, Wayne W Grody, Sarah S Kalia, Bruce R Korf, Christa L Martin, Amy L McGuire, Robert L Nussbaum, Julianne M O'Daniel, Kelly E Ormond,[...]. Genet Med 2013
100

Guidance for laboratories performing molecular pathology for cancer patients.
Ian A Cree, Zandra Deans, Marjolijn J L Ligtenberg, Nicola Normanno, Anders Edsjö, Etienne Rouleau, Francesc Solé, Erik Thunnissen, Wim Timens, Ed Schuuring,[...]. J Clin Pathol 2014
95
100

Genome-wide methylation analysis identifies a core set of hypermethylated genes in CIMP-H colorectal cancer.
Tyler McInnes, Donghui Zou, Dasari S Rao, Francesca M Munro, Vicky L Phillips, John L McCall, Michael A Black, Anthony E Reeve, Parry J Guilford. BMC Cancer 2017
15
100

Good laboratory practices for molecular genetic testing for heritable diseases and conditions.
Bin Chen, MariBeth Gagnon, Shahram Shahangian, Nancy L Anderson, Devery A Howerton, Joe D Boone. MMWR Recomm Rep 2009
55
100

Distinguishing between driver and passenger mutations in individual cancer genomes by network enrichment analysis.
Simon Kebede Merid, Daria Goranskaya, Andrey Alexeyenko. BMC Bioinformatics 2014
41
100


Identification of Potential Key Genes Associated With the Pathogenesis and Prognosis of Gastric Cancer Based on Integrated Bioinformatics Analysis.
Xinkui Liu, Jiarui Wu, Dan Zhang, Zhitong Bing, Jinhui Tian, Mengwei Ni, Xiaomeng Zhang, Ziqi Meng, Shuyu Liu. Front Genet 2018
56
100

Building the foundation for genomics in precision medicine.
Samuel J Aronson, Heidi L Rehm. Nature 2015
188
100

Identification of driver genes in hepatocellular carcinoma by exome sequencing.
Sean P Cleary, William R Jeck, Xiaobei Zhao, Kui Chen, Sara R Selitsky, Gleb L Savich, Ting-Xu Tan, Michael C Wu, Gad Getz, Michael S Lawrence,[...]. Hepatology 2013
183
100

The Role of Next-Generation Sequencing in Enabling Personalized Oncology Therapy.
C A Cummings, E Peters, L Lacroix, F Andre, M R Lackner. Clin Transl Sci 2016
23
100

Standardization and quality management in next-generation sequencing.
Christoph Endrullat, Jörn Glökler, Philipp Franke, Marcus Frohme. Appl Transl Genom 2016
80
100

Standardized decision support in next generation sequencing reports of somatic cancer variants.
Rodrigo Dienstmann, Fei Dong, Darrell Borger, Dora Dias-Santagata, Leif W Ellisen, Long P Le, A John Iafrate. Mol Oncol 2014
54
100

Comprehensive identification of mutational cancer driver genes across 12 tumor types.
David Tamborero, Abel Gonzalez-Perez, Christian Perez-Llamas, Jordi Deu-Pons, Cyriac Kandoth, Jüri Reimand, Michael S Lawrence, Gad Getz, Gary D Bader, Li Ding,[...]. Sci Rep 2013
308
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.