A citation-based method for searching scientific literature

Nicholas M Tran, Karthik Shekhar, Irene E Whitney, Anne Jacobi, Inbal Benhar, Guosong Hong, Wenjun Yan, Xian Adiconis, McKinzie E Arnold, Jung Min Lee, Joshua Z Levin, Dingchang Lin, Chen Wang, Charles M Lieber, Aviv Regev, Zhigang He, Joshua R Sanes. Neuron 2019
Times Cited: 100







List of co-cited articles
1187 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Single cell transcriptome profiling of retinal ganglion cells identifies cellular subtypes.
Bruce A Rheaume, Amyeo Jereen, Mohan Bolisetty, Muhammad S Sajid, Yue Yang, Kathleen Renna, Lili Sun, Paul Robson, Ephraim F Trakhtenberg. Nat Commun 2018
146
43


The functional diversity of retinal ganglion cells in the mouse.
Tom Baden, Philipp Berens, Katrin Franke, Miroslav Román Rosón, Matthias Bethge, Thomas Euler. Nature 2016
380
31

Subtype-specific regeneration of retinal ganglion cells following axotomy: effects of osteopontin and mTOR signaling.
Xin Duan, Mu Qiao, Fengfeng Bei, In-Jung Kim, Zhigang He, Joshua R Sanes. Neuron 2015
219
30

Molecular Classification and Comparative Taxonomics of Foveal and Peripheral Cells in Primate Retina.
Yi-Rong Peng, Karthik Shekhar, Wenjun Yan, Dustin Herrmann, Anna Sappington, Gregory S Bryman, Tavé van Zyl, Michael Tri H Do, Aviv Regev, Joshua R Sanes. Cell 2019
127
21

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets.
Evan Z Macosko, Anindita Basu, Rahul Satija, James Nemesh, Karthik Shekhar, Melissa Goldman, Itay Tirosh, Allison R Bialas, Nolan Kamitaki, Emily M Martersteck,[...]. Cell 2015
21

Promoting axon regeneration in the adult CNS by modulation of the PTEN/mTOR pathway.
Kevin Kyungsuk Park, Kai Liu, Yang Hu, Patrice D Smith, Chen Wang, Bin Cai, Bengang Xu, Lauren Connolly, Ioannis Kramvis, Mustafa Sahin,[...]. Science 2008
967
21

Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics.
Karthik Shekhar, Sylvain W Lapan, Irene E Whitney, Nicholas M Tran, Evan Z Macosko, Monika Kowalczyk, Xian Adiconis, Joshua Z Levin, James Nemesh, Melissa Goldman,[...]. Cell 2016
468
20

Sox11 Expression Promotes Regeneration of Some Retinal Ganglion Cell Types but Kills Others.
Michael W Norsworthy, Fengfeng Bei, Riki Kawaguchi, Qing Wang, Nicholas M Tran, Yi Li, Benedikt Brommer, Yiming Zhang, Chen Wang, Joshua R Sanes,[...]. Neuron 2017
72
27

The RNA binding protein RBPMS is a selective marker of ganglion cells in the mammalian retina.
Allen R Rodriguez, Luis Pérez de Sevilla Müller, Nicholas C Brecha. J Comp Neurol 2014
237
19

KLF family members regulate intrinsic axon regeneration ability.
Darcie L Moore, Murray G Blackmore, Ying Hu, Klaus H Kaestner, John L Bixby, Vance P Lemmon, Jeffrey L Goldberg. Science 2009
443
19

Sustained axon regeneration induced by co-deletion of PTEN and SOCS3.
Fang Sun, Kevin K Park, Stephane Belin, Dongqing Wang, Tao Lu, Gang Chen, Kang Zhang, Cecil Yeung, Guoping Feng, Bruce A Yankner,[...]. Nature 2011
435
17

Neural activity promotes long-distance, target-specific regeneration of adult retinal axons.
Jung-Hwan A Lim, Benjamin K Stafford, Phong L Nguyen, Brian V Lien, Chen Wang, Katherine Zukor, Zhigang He, Andrew D Huberman. Nat Neurosci 2016
120
17

Mouse Retinal Cell Atlas: Molecular Identification of over Sixty Amacrine Cell Types.
Wenjun Yan, Mallory A Laboulaye, Nicholas M Tran, Irene E Whitney, Inbal Benhar, Joshua R Sanes. J Neurosci 2020
37
45

The neuronal organization of the retina.
Richard H Masland. Neuron 2012
425
15

Single-Cell RNA-Seq Analysis of Retinal Development Identifies NFI Factors as Regulating Mitotic Exit and Late-Born Cell Specification.
Brian S Clark, Genevieve L Stein-O'Brien, Fion Shiau, Gabrielle H Cannon, Emily Davis-Marcisak, Thomas Sherman, Clayton P Santiago, Thanh V Hoang, Fatemeh Rajaii, Rebecca E James-Esposito,[...]. Neuron 2019
104
15

Diverse Central Projection Patterns of Retinal Ganglion Cells.
Emily M Martersteck, Karla E Hirokawa, Mariah Evarts, Amy Bernard, Xin Duan, Yang Li, Lydia Ng, Seung W Oh, Benjamin Ouellette, Joshua J Royall,[...]. Cell Rep 2017
82
18

Digital Museum of Retinal Ganglion Cells with Dense Anatomy and Physiology.
J Alexander Bae, Shang Mu, Jinseop S Kim, Nicholas L Turner, Ignacio Tartavull, Nico Kemnitz, Chris S Jordan, Alex D Norton, William M Silversmith, Rachel Prentki,[...]. Cell 2018
58
25

Four alpha ganglion cell types in mouse retina: Function, structure, and molecular signatures.
Brenna Krieger, Mu Qiao, David L Rousso, Joshua R Sanes, Markus Meister. PLoS One 2017
75
18

Thrombospondin-1 Mediates Axon Regeneration in Retinal Ganglion Cells.
Eric R Bray, Benjamin J Yungher, Konstantin Levay, Marcio Ribeiro, Gennady Dvoryanchikov, Ana C Ayupe, Kinjal Thakor, Victoria Marks, Michael Randolph, Matt C Danzi,[...]. Neuron 2019
26
50

Reaching the brain: Advances in optic nerve regeneration.
Larry I Benowitz, Zhigang He, Jeffrey L Goldberg. Exp Neurol 2017
107
13

SOCS3 deletion promotes optic nerve regeneration in vivo.
Patrice D Smith, Fang Sun, Kevin Kyungsuk Park, Bin Cai, Chen Wang, Kenichiro Kuwako, Irene Martinez-Carrasco, Lauren Connolly, Zhigang He. Neuron 2009
290
12

Full-length axon regeneration in the adult mouse optic nerve and partial recovery of simple visual behaviors.
Silmara de Lima, Yoshiki Koriyama, Takuji Kurimoto, Julia Teixeira Oliveira, Yuqin Yin, Yiqing Li, Hui-Ya Gilbert, Michela Fagiolini, Ana Maria Blanco Martinez, Larry Benowitz. Proc Natl Acad Sci U S A 2012
200
12

Single-cell transcriptomic atlas of the human retina identifies cell types associated with age-related macular degeneration.
Madhvi Menon, Shahin Mohammadi, Jose Davila-Velderrain, Brittany A Goods, Tanina D Cadwell, Yu Xing, Anat Stemmer-Rachamimov, Alex K Shalek, John Christopher Love, Manolis Kellis,[...]. Nat Commun 2019
60
18

Single-Cell Transcriptomic Comparison of Human Fetal Retina, hPSC-Derived Retinal Organoids, and Long-Term Retinal Cultures.
Akshayalakshmi Sridhar, Akina Hoshino, Connor R Finkbeiner, Alex Chitsazan, Li Dai, Alexandra K Haugan, Kayla M Eschenbacher, Dana L Jackson, Cole Trapnell, Olivia Bermingham-McDonogh,[...]. Cell Rep 2020
50
22

Injury-induced decline of intrinsic regenerative ability revealed by quantitative proteomics.
Stephane Belin, Homaira Nawabi, Chen Wang, Shaojun Tang, Alban Latremoliere, Peter Warren, Hubert Schorle, Ceren Uncu, Clifford J Woolf, Zhigang He,[...]. Neuron 2015
118
11

Contributions of Retinal Ganglion Cells to Subcortical Visual Processing and Behaviors.
Onkar S Dhande, Benjamin K Stafford, Jung-Hwan A Lim, Andrew D Huberman. Annu Rev Vis Sci 2015
66
16


DLK initiates a transcriptional program that couples apoptotic and regenerative responses to axonal injury.
Trent A Watkins, Bei Wang, Sarah Huntwork-Rodriguez, Jing Yang, Zhiyu Jiang, Jeffrey Eastham-Anderson, Zora Modrusan, Joshua S Kaminker, Marc Tessier-Lavigne, Joseph W Lewcock. Proc Natl Acad Sci U S A 2013
173
10

Restoration of Visual Function by Enhancing Conduction in Regenerated Axons.
Fengfeng Bei, Henry Hing Cheong Lee, Xuefeng Liu, Georgia Gunner, Hai Jin, Long Ma, Chen Wang, Lijun Hou, Takao K Hensch, Eric Frank,[...]. Cell 2016
117
10

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
10


Connectomic reconstruction of the inner plexiform layer in the mouse retina.
Moritz Helmstaedter, Kevin L Briggman, Srinivas C Turaga, Viren Jain, H Sebastian Seung, Winfried Denk. Nature 2013
431
9

Single-cell transcriptional logic of cell-fate specification and axon guidance in early-born retinal neurons.
Quentin Lo Giudice, Marion Leleu, Gioele La Manno, Pierre J Fabre. Development 2019
20
45

Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution.
Cameron S Cowan, Magdalena Renner, Martina De Gennaro, Brigitte Gross-Scherf, David Goldblum, Yanyan Hou, Martin Munz, Tiago M Rodrigues, Jacek Krol, Tamas Szikra,[...]. Cell 2020
61
14


Massively parallel digital transcriptional profiling of single cells.
Grace X Y Zheng, Jessica M Terry, Phillip Belgrader, Paul Ryvkin, Zachary W Bent, Ryan Wilson, Solongo B Ziraldo, Tobias D Wheeler, Geoff P McDermott, Junjie Zhu,[...]. Nat Commun 2017
9

Satb1 Regulates Contactin 5 to Pattern Dendrites of a Mammalian Retinal Ganglion Cell.
Yi-Rong Peng, Nicholas M Tran, Arjun Krishnaswamy, Dimitar Kostadinov, Emily M Martersteck, Joshua R Sanes. Neuron 2017
47
19

Oncomodulin is a macrophage-derived signal for axon regeneration in retinal ganglion cells.
Yuqin Yin, Michael T Henzl, Barbara Lorber, Toru Nakazawa, Tommy T Thomas, Fan Jiang, Robert Langer, Larry I Benowitz. Nat Neurosci 2006
338
9

Long-distance axon regeneration in the mature optic nerve: contributions of oncomodulin, cAMP, and pten gene deletion.
Takuji Kurimoto, Yuqin Yin, Kumiko Omura, Hui-ya Gilbert, Daniel Kim, Ling-Ping Cen, Lilamarie Moko, Sebastian Kügler, Larry I Benowitz. J Neurosci 2010
176
9

Astrocyte scar formation aids central nervous system axon regeneration.
Mark A Anderson, Joshua E Burda, Yilong Ren, Yan Ao, Timothy M O'Shea, Riki Kawaguchi, Giovanni Coppola, Baljit S Khakh, Timothy J Deming, Michael V Sofroniew. Nature 2016
789
9

Differential progression of structural and functional alterations in distinct retinal ganglion cell types in a mouse model of glaucoma.
Luca Della Santina, Denise M Inman, Caroline B Lupien, Philip J Horner, Rachel O L Wong. J Neurosci 2013
147
9

Comprehensive Integration of Single-Cell Data.
Tim Stuart, Andrew Butler, Paul Hoffman, Christoph Hafemeister, Efthymia Papalexi, William M Mauck, Yuhan Hao, Marlon Stoeckius, Peter Smibert, Rahul Satija. Cell 2019
9

Molecular signatures of retinal ganglion cells revealed through single cell profiling.
Lauren A Laboissonniere, Jillian J Goetz, Gregory M Martin, Ran Bi, Terry J S Lund, Laura Ellson, Madison R Lynch, Bailey Mooney, Hannah Wickham, Peng Liu,[...]. Sci Rep 2019
19
47

Single-Cell Analysis of Human Retina Identifies Evolutionarily Conserved and Species-Specific Mechanisms Controlling Development.
Yufeng Lu, Fion Shiau, Wenyang Yi, Suying Lu, Qian Wu, Joel D Pearson, Alyssa Kallman, Suijuan Zhong, Thanh Hoang, Zhentao Zuo,[...]. Dev Cell 2020
38
23

Global prevalence of glaucoma and projections of glaucoma burden through 2040: a systematic review and meta-analysis.
Yih-Chung Tham, Xiang Li, Tien Y Wong, Harry A Quigley, Tin Aung, Ching-Yu Cheng. Ophthalmology 2014
9

Deconstructing Retinal Organoids: Single Cell RNA-Seq Reveals the Cellular Components of Human Pluripotent Stem Cell-Derived Retina.
Joseph Collin, Rachel Queen, Darin Zerti, Birthe Dorgau, Rafiqul Hussain, Jonathan Coxhead, Simon Cockell, Majlinda Lako. Stem Cells 2019
42
19

The major cell populations of the mouse retina.
C J Jeon, E Strettoi, R H Masland. J Neurosci 1998
884
8

Retinal ganglion cell genesis requires lakritz, a Zebrafish atonal Homolog.
J N Kay, K C Finger-Baier, T Roeser, W Staub, H Baier. Neuron 2001
296
8

Zinc chelation and Klf9 knockdown cooperatively promote axon regeneration after optic nerve injury.
Ephraim F Trakhtenberg, Yiqing Li, Qian Feng, Janice Tso, Paul A Rosenberg, Jeffrey L Goldberg, Larry I Benowitz. Exp Neurol 2018
23
34


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.