A citation-based method for searching scientific literature

Bartosz Gabryelczyk, Hao Cai, Xiangyan Shi, Yue Sun, Piet J M Swinkels, Stefan Salentinig, Konstantin Pervushin, Ali Miserez. Nat Commun 2019
Times Cited: 36







List of co-cited articles
311 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A Molecular Grammar Governing the Driving Forces for Phase Separation of Prion-like RNA Binding Proteins.
Jie Wang, Jeong-Mo Choi, Alex S Holehouse, Hyun O Lee, Xiaojie Zhang, Marcus Jahnel, Shovamayee Maharana, Régis Lemaitre, Andrei Pozniakovsky, David Drechsel,[...]. Cell 2018
648
44

Biomolecular condensates: organizers of cellular biochemistry.
Salman F Banani, Hyun O Lee, Anthony A Hyman, Michael K Rosen. Nat Rev Mol Cell Biol 2017
36

Molecular interactions underlying liquid-liquid phase separation of the FUS low-complexity domain.
Anastasia C Murthy, Gregory L Dignon, Yelena Kan, Gül H Zerze, Sapun H Parekh, Jeetain Mittal, Nicolas L Fawzi. Nat Struct Mol Biol 2019
197
33

A Liquid-to-Solid Phase Transition of the ALS Protein FUS Accelerated by Disease Mutation.
Avinash Patel, Hyun O Lee, Louise Jawerth, Shovamayee Maharana, Marcus Jahnel, Marco Y Hein, Stoyno Stoynov, Julia Mahamid, Shambaditya Saha, Titus M Franzmann,[...]. Cell 2015
30

Liquid phase condensation in cell physiology and disease.
Yongdae Shin, Clifford P Brangwynne. Science 2017
27

Pi-Pi contacts are an overlooked protein feature relevant to phase separation.
Robert McCoy Vernon, Paul Andrew Chong, Brian Tsang, Tae Hun Kim, Alaji Bah, Patrick Farber, Hong Lin, Julie Deborah Forman-Kay. Elife 2018
285
27

Phase transition of a disordered nuage protein generates environmentally responsive membraneless organelles.
Timothy J Nott, Evangelia Petsalaki, Patrick Farber, Dylan Jervis, Eden Fussner, Anne Plochowietz, Timothy D Craggs, David P Bazett-Jones, Tony Pawson, Julie D Forman-Kay,[...]. Mol Cell 2015
845
25

Sequence Determinants of Intracellular Phase Separation by Complex Coacervation of a Disordered Protein.
Chi W Pak, Martyna Kosno, Alex S Holehouse, Shae B Padrick, Anuradha Mittal, Rustam Ali, Ali A Yunus, David R Liu, Rohit V Pappu, Michael K Rosen. Mol Cell 2016
349
25


Identifying sequence perturbations to an intrinsically disordered protein that determine its phase-separation behavior.
Benjamin S Schuster, Gregory L Dignon, Wai Shing Tang, Fleurie M Kelley, Aishwarya Kanchi Ranganath, Craig N Jahnke, Alison G Simpkins, Roshan Mammen Regy, Daniel A Hammer, Matthew C Good,[...]. Proc Natl Acad Sci U S A 2020
81
25


Valence and patterning of aromatic residues determine the phase behavior of prion-like domains.
Erik W Martin, Alex S Holehouse, Ivan Peran, Mina Farag, J Jeremias Incicco, Anne Bremer, Christy R Grace, Andrea Soranno, Rohit V Pappu, Tanja Mittag. Science 2020
239
22


Germline P granules are liquid droplets that localize by controlled dissolution/condensation.
Clifford P Brangwynne, Christian R Eckmann, David S Courson, Agata Rybarska, Carsten Hoege, Jöbin Gharakhani, Frank Jülicher, Anthony A Hyman. Science 2009
19

The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics.
Shana Elbaum-Garfinkle, Younghoon Kim, Krzysztof Szczepaniak, Carlos Chih-Hsiung Chen, Christian R Eckmann, Sua Myong, Clifford P Brangwynne. Proc Natl Acad Sci U S A 2015
570
19

Phase transitions in the assembly of multivalent signalling proteins.
Pilong Li, Sudeep Banjade, Hui-Chun Cheng, Soyeon Kim, Baoyu Chen, Liang Guo, Marc Llaguno, Javoris V Hollingsworth, David S King, Salman F Banani,[...]. Nature 2012
19

Phosphorylation of the FUS low-complexity domain disrupts phase separation, aggregation, and toxicity.
Zachary Monahan, Veronica H Ryan, Abigail M Janke, Kathleen A Burke, Shannon N Rhoads, Gül H Zerze, Robert O'Meally, Gregory L Dignon, Alexander E Conicella, Wenwei Zheng,[...]. EMBO J 2017
332
16

Stress-Triggered Phase Separation Is an Adaptive, Evolutionarily Tuned Response.
Joshua A Riback, Christopher D Katanski, Jamie L Kear-Scott, Evgeny V Pilipenko, Alexandra E Rojek, Tobin R Sosnick, D Allan Drummond. Cell 2017
367
16

Coexisting Liquid Phases Underlie Nucleolar Subcompartments.
Marina Feric, Nilesh Vaidya, Tyler S Harmon, Diana M Mitrea, Lian Zhu, Tiffany M Richardson, Richard W Kriwacki, Rohit V Pappu, Clifford P Brangwynne. Cell 2016
790
16


Structural and hydrodynamic properties of an intrinsically disordered region of a germ cell-specific protein on phase separation.
Jacob P Brady, Patrick J Farber, Ashok Sekhar, Yi-Hsuan Lin, Rui Huang, Alaji Bah, Timothy J Nott, Hue Sun Chan, Andrew J Baldwin, Julie D Forman-Kay,[...]. Proc Natl Acad Sci U S A 2017
193
16

The molecular language of membraneless organelles.
Edward Gomes, James Shorter. J Biol Chem 2019
253
16

Protein Phase Separation: A New Phase in Cell Biology.
Steven Boeynaems, Simon Alberti, Nicolas L Fawzi, Tanja Mittag, Magdalini Polymenidou, Frederic Rousseau, Joost Schymkowitz, James Shorter, Benjamin Wolozin, Ludo Van Den Bosch,[...]. Trends Cell Biol 2018
784
16

Liquid-liquid phase separation in biology.
Anthony A Hyman, Christoph A Weber, Frank Jülicher. Annu Rev Cell Dev Biol 2014
16

Phase separation by low complexity domains promotes stress granule assembly and drives pathological fibrillization.
Amandine Molliex, Jamshid Temirov, Jihun Lee, Maura Coughlin, Anderson P Kanagaraj, Hong Joo Kim, Tanja Mittag, J Paul Taylor. Cell 2015
16

Structure of FUS Protein Fibrils and Its Relevance to Self-Assembly and Phase Separation of Low-Complexity Domains.
Dylan T Murray, Masato Kato, Yi Lin, Kent R Thurber, Ivan Hung, Steven L McKnight, Robert Tycko. Cell 2017
352
13

The liquid structure of elastin.
Sarah Rauscher, Régis Pomès. Elife 2017
70
13

FUS Phase Separation Is Modulated by a Molecular Chaperone and Methylation of Arginine Cation-π Interactions.
Seema Qamar, GuoZhen Wang, Suzanne J Randle, Francesco Simone Ruggeri, Juan A Varela, Julie Qiaojin Lin, Emma C Phillips, Akinori Miyashita, Declan Williams, Florian Ströhl,[...]. Cell 2018
371
13


Phase behaviour of disordered proteins underlying low density and high permeability of liquid organelles.
Ming-Tzo Wei, Shana Elbaum-Garfinkle, Alex S Holehouse, Carlos Chih-Hsiung Chen, Marina Feric, Craig B Arnold, Rodney D Priestley, Rohit V Pappu, Clifford P Brangwynne. Nat Chem 2017
220
13

ALS Mutations Disrupt Phase Separation Mediated by α-Helical Structure in the TDP-43 Low-Complexity C-Terminal Domain.
Alexander E Conicella, Gül H Zerze, Jeetain Mittal, Nicolas L Fawzi. Structure 2016
379
13

Active liquid-like behavior of nucleoli determines their size and shape in Xenopus laevis oocytes.
Clifford P Brangwynne, Timothy J Mitchison, Anthony A Hyman. Proc Natl Acad Sci U S A 2011
638
13

Controllable protein phase separation and modular recruitment to form responsive membraneless organelles.
Benjamin S Schuster, Ellen H Reed, Ranganath Parthasarathy, Craig N Jahnke, Reese M Caldwell, Jessica G Bermudez, Holly Ramage, Matthew C Good, Daniel A Hammer. Nat Commun 2018
148
13

Liquid droplet formation by HP1α suggests a role for phase separation in heterochromatin.
Adam G Larson, Daniel Elnatan, Madeline M Keenen, Michael J Trnka, Jonathan B Johnston, Alma L Burlingame, David A Agard, Sy Redding, Geeta J Narlikar. Nature 2017
792
13

Self-coacervation of modular squid beak proteins - a comparative study.
Hao Cai, Bartosz Gabryelczyk, Malathy S S Manimekalai, Gerhard Grüber, Stefan Salentinig, Ali Miserez. Soft Matter 2017
21
23

LASSI: A lattice model for simulating phase transitions of multivalent proteins.
Jeong-Mo Choi, Furqan Dar, Rohit V Pappu. PLoS Comput Biol 2019
113
13


Tau protein liquid-liquid phase separation can initiate tau aggregation.
Susanne Wegmann, Bahareh Eftekharzadeh, Katharina Tepper, Katarzyna M Zoltowska, Rachel E Bennett, Simon Dujardin, Pawel R Laskowski, Danny MacKenzie, Tarun Kamath, Caitlin Commins,[...]. EMBO J 2018
367
13

TAR DNA-binding protein 43 (TDP-43) liquid-liquid phase separation is mediated by just a few aromatic residues.
Hao-Ru Li, Wan-Chin Chiang, Po-Chun Chou, Won-Jing Wang, Jie-Rong Huang. J Biol Chem 2018
102
13

Intrinsically disordered proteins in cellular signalling and regulation.
Peter E Wright, H Jane Dyson. Nat Rev Mol Cell Biol 2015
13

Phase separation of a yeast prion protein promotes cellular fitness.
Titus M Franzmann, Marcus Jahnel, Andrei Pozniakovsky, Julia Mahamid, Alex S Holehouse, Elisabeth Nüske, Doris Richter, Wolfgang Baumeister, Stephan W Grill, Rohit V Pappu,[...]. Science 2018
308
13

Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels.
Masato Kato, Tina W Han, Shanhai Xie, Kevin Shi, Xinlin Du, Leeju C Wu, Hamid Mirzaei, Elizabeth J Goldsmith, Jamie Longgood, Jimin Pei,[...]. Cell 2012
13

Residue-by-Residue View of In Vitro FUS Granules that Bind the C-Terminal Domain of RNA Polymerase II.
Kathleen A Burke, Abigail M Janke, Christy L Rhine, Nicolas L Fawzi. Mol Cell 2015
434
13

De novo engineering of intracellular condensates using artificial disordered proteins.
Michael Dzuricky, Bradley A Rogers, Abdulla Shahid, Paul S Cremer, Ashutosh Chilkoti. Nat Chem 2020
50
13

Physical Principles Underlying the Complex Biology of Intracellular Phase Transitions.
Jeong-Mo Choi, Alex S Holehouse, Rohit V Pappu. Annu Rev Biophys 2020
207
13

Unraveling Molecular Interactions in Liquid-Liquid Phase Separation of Disordered Proteins by Atomistic Simulations.
Matteo Paloni, Rémy Bailly, Luca Ciandrini, Alessandro Barducci. J Phys Chem B 2020
38
13

Partitioning of cancer therapeutics in nuclear condensates.
Isaac A Klein, Ann Boija, Lena K Afeyan, Susana Wilson Hawken, Mengyang Fan, Alessandra Dall'Agnese, Ozgur Oksuz, Jonathan E Henninger, Krishna Shrinivas, Benjamin R Sabari,[...]. Science 2020
114
13

Relation between single-molecule properties and phase behavior of intrinsically disordered proteins.
Gregory L Dignon, Wenwei Zheng, Robert B Best, Young C Kim, Jeetain Mittal. Proc Natl Acad Sci U S A 2018
120
11

Injectable tissue integrating networks from recombinant polypeptides with tunable order.
Stefan Roberts, Tyler S Harmon, Jeffrey L Schaal, Vincent Miao, Kan Jonathan Li, Andrew Hunt, Yi Wen, Terrence G Oas, Joel H Collier, Rohit V Pappu,[...]. Nat Mater 2018
64
11

RNA Controls PolyQ Protein Phase Transitions.
Huaiying Zhang, Shana Elbaum-Garfinkle, Erin M Langdon, Nicole Taylor, Patricia Occhipinti, Andrew A Bridges, Clifford P Brangwynne, Amy S Gladfelter. Mol Cell 2015
379
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.