A citation-based method for searching scientific literature

Travis Walrath, Robert A Malizia, Xinjun Zhu, Stephen P Sharp, Shanti S D'Souza, Reynold Lopez-Soler, Brian Parr, Brittany Kartchner, Edward C Lee, Steven C Stain, Yoichiro Iwakura, William O'Connor. Am J Physiol Gastrointest Liver Physiol 2020
Times Cited: 10







List of co-cited articles
31 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


T cell-derived interferon-γ programs stem cell death in immune-mediated intestinal damage.
S Takashima, M L Martin, S A Jansen, Y Fu, J Bos, D Chandra, M H O'Connor, A M Mertelsmann, P Vinci, J Kuttiyara,[...]. Sci Immunol 2019
54
20

Adhesive Interactions between Mononuclear Phagocytes and Intestinal Epithelium Perturb Normal Epithelial Differentiation and Serve as a Therapeutic Target in Inflammatory Bowel Disease.
Sozaburo Ihara, Yoshihiro Hirata, Yohko Hikiba, Aya Yamashita, Mayo Tsuboi, Masahiro Hata, Mitsuru Konishi, Nobumi Suzuki, Kosuke Sakitani, Hiroto Kinoshita,[...]. J Crohns Colitis 2018
17
20

Innate immune receptor NOD2 mediates LGR5+ intestinal stem cell protection against ROS cytotoxicity via mitophagy stimulation.
Antonin Levy, Aline Stedman, Eric Deutsch, Françoise Donnadieu, Herbert W Virgin, Philippe J Sansonetti, Giulia Nigro. Proc Natl Acad Sci U S A 2020
39
20

Single Lgr5 stem cells build crypt-villus structures in vitro without a mesenchymal niche.
Toshiro Sato, Robert G Vries, Hugo J Snippert, Marc van de Wetering, Nick Barker, Daniel E Stange, Johan H van Es, Arie Abo, Pekka Kujala, Peter J Peters,[...]. Nature 2009
20


Long-term expansion of epithelial organoids from human colon, adenoma, adenocarcinoma, and Barrett's epithelium.
Toshiro Sato, Daniel E Stange, Marc Ferrante, Robert G J Vries, Johan H Van Es, Stieneke Van den Brink, Winan J Van Houdt, Apollo Pronk, Joost Van Gorp, Peter D Siersema,[...]. Gastroenterology 2011
20

Genome Toxicity and Impaired Stem Cell Function after Conditional Activation of CreERT2 in the Intestine.
Natacha Bohin, Elizabeth A Carlson, Linda C Samuelson. Stem Cell Reports 2018
23
20

The Lgr5 intestinal stem cell signature: robust expression of proposed quiescent '+4' cell markers.
Javier Muñoz, Daniel E Stange, Arnout G Schepers, Marc van de Wetering, Bon-Kyoung Koo, Shalev Itzkovitz, Richard Volckmann, Kevin S Kung, Jan Koster, Sorina Radulescu,[...]. EMBO J 2012
510
20

Ascl2-Dependent Cell Dedifferentiation Drives Regeneration of Ablated Intestinal Stem Cells.
Kazutaka Murata, Unmesh Jadhav, Shariq Madha, Johan van Es, Justin Dean, Alessia Cavazza, Kai Wucherpfennig, Franziska Michor, Hans Clevers, Ramesh A Shivdasani. Cell Stem Cell 2020
81
20

The pan-ErbB negative regulator Lrig1 is an intestinal stem cell marker that functions as a tumor suppressor.
Anne E Powell, Yang Wang, Yina Li, Emily J Poulin, Anna L Means, Mary K Washington, James N Higginbotham, Alwin Juchheim, Nripesh Prasad, Shawn E Levy,[...]. Cell 2012
471
20

A reserve stem cell population in small intestine renders Lgr5-positive cells dispensable.
Hua Tian, Brian Biehs, Søren Warming, Kevin G Leong, Linda Rangell, Ophir D Klein, Frederic J de Sauvage. Nature 2011
780
20

Identification of stem cells in small intestine and colon by marker gene Lgr5.
Nick Barker, Johan H van Es, Jeroen Kuipers, Pekka Kujala, Maaike van den Born, Miranda Cozijnsen, Andrea Haegebarth, Jeroen Korving, Harry Begthel, Peter J Peters,[...]. Nature 2007
20


Chemically induced mouse models of acute and chronic intestinal inflammation.
Stefan Wirtz, Vanessa Popp, Markus Kindermann, Katharina Gerlach, Benno Weigmann, Stefan Fichtner-Feigl, Markus F Neurath. Nat Protoc 2017
499
20

T Helper Cell Cytokines Modulate Intestinal Stem Cell Renewal and Differentiation.
Moshe Biton, Adam L Haber, Noga Rogel, Grace Burgin, Semir Beyaz, Alexandra Schnell, Orr Ashenberg, Chien-Wen Su, Christopher Smillie, Karthik Shekhar,[...]. Cell 2018
214
20

Paneth cell extrusion and release of antimicrobial products is directly controlled by immune cell-derived IFN-γ.
Henner F Farin, Wouter R Karthaus, Pekka Kujala, Maryam Rakhshandehroo, Gerald Schwank, Robert G J Vries, Eric Kalkhoven, Edward E S Nieuwenhuis, Hans Clevers. J Exp Med 2014
169
20

Interferons at age 50: past, current and future impact on biomedicine.
Ernest C Borden, Ganes C Sen, Gilles Uze, Robert H Silverman, Richard M Ransohoff, Graham R Foster, George R Stark. Nat Rev Drug Discov 2007
793
20

A randomized controlled trial of the efficacy and safety of CCX282-B, an orally-administered blocker of chemokine receptor CCR9, for patients with Crohn's disease.
Satish Keshav, Tomáš Vaňásek, Yaron Niv, Robert Petryka, Stephanie Howaldt, Mauro Bafutto, István Rácz, David Hetzel, Ole Haagen Nielsen, Séverine Vermeire,[...]. PLoS One 2013
102
20

Randomised clinical trial: vercirnon, an oral CCR9 antagonist, vs. placebo as induction therapy in active Crohn's disease.
B G Feagan, W J Sandborn, G D'Haens, S D Lee, M Allez, R N Fedorak, U Seidler, S Vermeire, I C Lawrance, A C Maroney,[...]. Aliment Pharmacol Ther 2015
60
20

Characterization of CCX282-B, an orally bioavailable antagonist of the CCR9 chemokine receptor, for treatment of inflammatory bowel disease.
Matthew J Walters, Yu Wang, Nu Lai, Trageen Baumgart, Bin N Zhao, Daniel J Dairaghi, Pirow Bekker, Linda S Ertl, Mark E T Penfold, Juan C Jaen,[...]. J Pharmacol Exp Ther 2010
111
20


Regulated production of interferon-inducible T-cell chemoattractants by human intestinal epithelial cells.
M B Dwinell, N Lügering, L Eckmann, M F Kagnoff. Gastroenterology 2001
165
20

Anti-interferon-inducible chemokine, CXCL10, reduces colitis by impairing T helper-1 induction and recruitment in mice.
Jae Geun Hyun, Goo Lee, Jeffrey B Brown, Gery R Grimm, Yueming Tang, Navhda Mittal, Ramanarao Dirisina, Zheng Zhang, Jonathan P Fryer, Joel V Weinstock,[...]. Inflamm Bowel Dis 2005
63
20

Antibody blockade of CCL25/CCR9 ameliorates early but not late chronic murine ileitis.
Jesús Rivera-Nieves, Johnson Ho, Giorgos Bamias, Natalia Ivashkina, Klaus Ley, Martin Oppermann, Fabio Cominelli. Gastroenterology 2006
108
20

CCL20 neutralization by a monoclonal antibody in healthy subjects selectively inhibits recruitment of CCR6+ cells in an experimental suction blister.
Gerben Bouma, Stefano Zamuner, Kirsty Hicks, Andrew Want, João Oliveira, Arpita Choudhury, Sara Brett, Darren Robertson, Leigh Felton, Virginia Norris,[...]. Br J Clin Pharmacol 2017
27
20

Blockade of CXCL10 protects mice from acute colitis and enhances crypt cell survival.
Shunya Sasaki, Hiroyuki Yoneyama, Kenji Suzuki, Hidehisa Suriki, Tsuneo Aiba, Shiro Watanabe, Yusuke Kawauchi, Hiroshi Kawachi, Fujio Shimizu, Kouji Matsushima,[...]. Eur J Immunol 2002
92
20

Anti-IP-10 antibody (BMS-936557) for ulcerative colitis: a phase II randomised study.
Lloyd Mayer, William J Sandborn, Yuriy Stepanov, Karel Geboes, Robert Hardi, Michael Yellin, Xiaolu Tao, Li An Xu, Luisa Salter-Cid, Sheila Gujrathi,[...]. Gut 2014
97
20

Eldelumab [anti-interferon-γ-inducible protein-10 antibody] Induction Therapy for Active Crohn's Disease: a Randomised, Double-blind, Placebo-controlled Phase IIa Study.
William J Sandborn, Paul Rutgeerts, Jean-Frédéric Colombel, Subrata Ghosh, Robert Petryka, Bruce E Sands, Pranab Mitra, Allison Luo. J Crohns Colitis 2017
19
20

Eldelumab [Anti-IP-10] Induction Therapy for Ulcerative Colitis: A Randomised, Placebo-Controlled, Phase 2b Study.
William J Sandborn, Jean-Frédéric Colombel, Subrata Ghosh, Bruce E Sands, Gerald Dryden, Xavier Hébuterne, Rupert W Leong, Brian Bressler, Thomas Ullman, Peter L Lakatos,[...]. J Crohns Colitis 2016
36
20


Enhanced expression of CXCL10 in inflammatory bowel disease: potential role of mucosal Toll-like receptor 3 stimulation.
Ann E Ostvik, Atle V B Granlund, Marit Bugge, Nadra J Nilsen, Sverre H Torp, Helge L Waldum, Jan K Damås, Terje Espevik, Arne K Sandvik. Inflamm Bowel Dis 2013
48
20

Human Colon-on-a-Chip Enables Continuous In Vitro Analysis of Colon Mucus Layer Accumulation and Physiology.
Alexandra Sontheimer-Phelps, David B Chou, Alessio Tovaglieri, Thomas C Ferrante, Taylor Duckworth, Cicely Fadel, Viktoras Frismantas, Arlene D Sutherland, Sasan Jalili-Firoozinezhad, Magdalena Kasendra,[...]. Cell Mol Gastroenterol Hepatol 2020
75
10


Enteroid Monolayers Reveal an Autonomous WNT and BMP Circuit Controlling Intestinal Epithelial Growth and Organization.
Curtis A Thorne, Ina W Chen, Laura E Sanman, Melanie H Cobb, Lani F Wu, Steven J Altschuler. Dev Cell 2018
84
10

Single cell analysis of Crohn's disease patient-derived small intestinal organoids reveals disease activity-dependent modification of stem cell properties.
Kohei Suzuki, Tatsuro Murano, Hiromichi Shimizu, Go Ito, Toru Nakata, Satoru Fujii, Fumiaki Ishibashi, Ami Kawamoto, Sho Anzai, Reiko Kuno,[...]. J Gastroenterol 2018
50
10

The Ussing chamber system for measuring intestinal permeability in health and disease.
Amanda Thomson, Kathryn Smart, Michelle S Somerville, Sarah N Lauder, Gautham Appanna, James Horwood, Lawrence Sunder Raj, Brijesh Srivastava, Dharmaraj Durai, Martin J Scurr,[...]. BMC Gastroenterol 2019
34
10

Fast and efficient generation of knock-in human organoids using homology-independent CRISPR-Cas9 precision genome editing.
Benedetta Artegiani, Delilah Hendriks, Joep Beumer, Rutger Kok, Xuan Zheng, Indi Joore, Susana Chuva de Sousa Lopes, Jeroen van Zon, Sander Tans, Hans Clevers. Nat Cell Biol 2020
85
10

Enhanced Utilization of Induced Pluripotent Stem Cell-Derived Human Intestinal Organoids Using Microengineered Chips.
Michael J Workman, John P Gleeson, Elissa J Troisi, Hannah Q Estrada, S Jordan Kerns, Christopher D Hinojosa, Geraldine A Hamilton, Stephan R Targan, Clive N Svendsen, Robert J Barrett. Cell Mol Gastroenterol Hepatol 2017
105
10

Duodenum Intestine-Chip for preclinical drug assessment in a human relevant model.
Magdalena Kasendra, Raymond Luc, Jianyi Yin, Dimitris V Manatakis, Gauri Kulkarni, Carolina Lucchesi, Josiah Sliz, Athanasia Apostolou, Laxmi Sunuwar, Jenifer Obrigewitch,[...]. Elife 2020
78
10

Bioengineered Human Organ-on-Chip Reveals Intestinal Microenvironment and Mechanical Forces Impacting Shigella Infection.
Alexandre Grassart, Valérie Malardé, Samy Gobaa, Anna Sartori-Rupp, Jordan Kerns, Katia Karalis, Benoit Marteyn, Philippe Sansonetti, Nathalie Sauvonnet. Cell Host Microbe 2019
54
10

Modelling Cryptosporidium infection in human small intestinal and lung organoids.
Inha Heo, Devanjali Dutta, Deborah A Schaefer, Nino Iakobachvili, Benedetta Artegiani, Norman Sachs, Kim E Boonekamp, Gregory Bowden, Antoni P A Hendrickx, Robert J L Willems,[...]. Nat Microbiol 2018
180
10

Monolayer culture of intestinal epithelium sustains Lgr5+ intestinal stem cells.
Yuan Liu, Zhen Qi, Xintong Li, Yanan Du, Ye-Guang Chen. Cell Discov 2018
26
10

Intestinal Inflammation Modulates the Epithelial Response to Butyrate in Patients With Inflammatory Bowel Disease.
Elena Ferrer-Picón, Isabella Dotti, Ana M Corraliza, Aida Mayorgas, Miriam Esteller, José Carlos Perales, Elena Ricart, Maria C Masamunt, Anna Carrasco, Eva Tristán,[...]. Inflamm Bowel Dis 2020
48
10

A 3D co-culture of three human cell lines to model the inflamed intestinal mucosa for safety testing of nanomaterials.
Julia Susewind, Cristiane de Souza Carvalho-Wodarz, Urska Repnik, Eva-Maria Collnot, Nicole Schneider-Daum, Gareth Wyn Griffiths, Claus-Michael Lehr. Nanotoxicology 2016
61
10

A three-dimensional immunocompetent intestine-on-chip model as in vitro platform for functional and microbial interaction studies.
Michelle Maurer, Mark S Gresnigt, Antonia Last, Tony Wollny, Florian Berlinghof, Rebecca Pospich, Zoltan Cseresnyes, Anna Medyukhina, Katja Graf, Marko Gröger,[...]. Biomaterials 2019
50
10

Self-organized intestinal epithelial monolayers in crypt and villus-like domains show effective barrier function.
Gizem Altay, Enara Larrañaga, Sébastien Tosi, Francisco M Barriga, Eduard Batlle, Vanesa Fernández-Majada, Elena Martínez. Sci Rep 2019
49
10

A microfluidics-based in vitro model of the gastrointestinal human-microbe interface.
Pranjul Shah, Joëlle V Fritz, Enrico Glaab, Mahesh S Desai, Kacy Greenhalgh, Audrey Frachet, Magdalena Niegowska, Matthew Estes, Christian Jäger, Carole Seguin-Devaux,[...]. Nat Commun 2016
270
10

Engineered human pluripotent-stem-cell-derived intestinal tissues with a functional enteric nervous system.
Michael J Workman, Maxime M Mahe, Stephen Trisno, Holly M Poling, Carey L Watson, Nambirajan Sundaram, Ching-Fang Chang, Jacqueline Schiesser, Philippe Aubert, Edouard G Stanley,[...]. Nat Med 2017
305
10

Multifunctional Bioreactor System for Human Intestine Tissues.
Wenda Zhou, Ying Chen, Terrence Roh, Yinan Lin, Shengjie Ling, Siwei Zhao, James D Lin, Noor Khalil, Dana M Cairns, Eleana Manousiouthakis,[...]. ACS Biomater Sci Eng 2018
22
10

Enteric nervous system in the small intestine: pathophysiology and clinical implications.
Behtash Ghazi Nezami, Shanthi Srinivasan. Curr Gastroenterol Rep 2010
66
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.