A citation-based method for searching scientific literature

Cláudia M Deus, King Faisal Yambire, Paulo J Oliveira, Nuno Raimundo. Trends Mol Med 2020
Times Cited: 58







List of co-cited articles
518 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Loss of Mitochondrial Function Impairs Lysosomes.
Julie Demers-Lamarche, Gérald Guillebaud, Mouna Tlili, Kiran Todkar, Noémie Bélanger, Martine Grondin, Angela P Nguyen, Jennifer Michel, Marc Germain. J Biol Chem 2016
102
15

Mitochondria-lysosome contacts regulate mitochondrial fission via RAB7 GTP hydrolysis.
Yvette C Wong, Daniel Ysselstein, Dimitri Krainc. Nature 2018
263
13


Mitochondrial respiratory chain deficiency inhibits lysosomal hydrolysis.
Lorena Fernandez-Mosquera, King Faisal Yambire, Renata Couto, Leonardo Pereyra, Kamil Pabis, Amy H Ponsford, Cátia V Diogo, Massimiliano Stagi, Ira Milosevic, Nuno Raimundo. Autophagy 2019
44
15

Acute and chronic mitochondrial respiratory chain deficiency differentially regulate lysosomal biogenesis.
Lorena Fernández-Mosquera, Cátia V Diogo, King Faisal Yambire, Gabriela L Santos, Marta Luna Sánchez, Paule Bénit, Pierre Rustin, Luis Carlos Lopez, Ira Milosevic, Nuno Raimundo. Sci Rep 2017
46
15

Lysosomal membrane permeabilization and cell death.
Fengjuan Wang, Raquel Gómez-Sintes, Patricia Boya. Traffic 2018
159
12

The Lysosome as a Regulatory Hub.
Rushika M Perera, Roberto Zoncu. Annu Rev Cell Dev Biol 2016
219
10

VPS13A and VPS13C are lipid transport proteins differentially localized at ER contact sites.
Nikit Kumar, Marianna Leonzino, William Hancock-Cerutti, Florian A Horenkamp, PeiQi Li, Joshua A Lees, Heather Wheeler, Karin M Reinisch, Pietro De Camilli. J Cell Biol 2018
195
10

Autophagosomes form at ER-mitochondria contact sites.
Maho Hamasaki, Nobumichi Furuta, Atsushi Matsuda, Akiko Nezu, Akitsugu Yamamoto, Naonobu Fujita, Hiroko Oomori, Takeshi Noda, Tokuko Haraguchi, Yasushi Hiraoka,[...]. Nature 2013
10

TFEB links autophagy to lysosomal biogenesis.
Carmine Settembre, Chiara Di Malta, Vinicia Assunta Polito, Moises Garcia Arencibia, Francesco Vetrini, Serkan Erdin, Serpil Uckac Erdin, Tuong Huynh, Diego Medina, Pasqualina Colella,[...]. Science 2011
10

Regulation and Function of Mitochondria-Lysosome Membrane Contact Sites in Cellular Homeostasis.
Yvette C Wong, Soojin Kim, Wesley Peng, Dimitri Krainc. Trends Cell Biol 2019
67
10

Mitochondrial Respiration Controls Lysosomal Function during Inflammatory T Cell Responses.
Francesc Baixauli, Rebeca Acín-Pérez, Carolina Villarroya-Beltrí, Carla Mazzeo, Norman Nuñez-Andrade, Enrique Gabandé-Rodriguez, Maria Dolores Ledesma, Alberto Blázquez, Miguel Angel Martin, Juan Manuel Falcón-Pérez,[...]. Cell Metab 2015
140
10

Lysosomes as a therapeutic target.
Srinivasa Reddy Bonam, Fengjuan Wang, Sylviane Muller. Nat Rev Drug Discov 2019
89
10

PINK1 is selectively stabilized on impaired mitochondria to activate Parkin.
Derek P Narendra, Seok Min Jin, Atsushi Tanaka, Der-Fen Suen, Clement A Gautier, Jie Shen, Mark R Cookson, Richard J Youle. PLoS Biol 2010
8

The ubiquitin kinase PINK1 recruits autophagy receptors to induce mitophagy.
Michael Lazarou, Danielle A Sliter, Lesley A Kane, Shireen A Sarraf, Chunxin Wang, Jonathon L Burman, Dionisia P Sideris, Adam I Fogel, Richard J Youle. Nature 2015
8

Crosstalk between Lysosomes and Mitochondria in Parkinson's Disease.
Nicoletta Plotegher, Michael R Duchen. Front Cell Dev Biol 2017
46
10

A gene network regulating lysosomal biogenesis and function.
Marco Sardiello, Michela Palmieri, Alberto di Ronza, Diego Luis Medina, Marta Valenza, Vincenzo Alessandro Gennarino, Chiara Di Malta, Francesca Donaudy, Valerio Embrione, Roman S Polishchuk,[...]. Science 2009
8

MTORC1 functions as a transcriptional regulator of autophagy by preventing nuclear transport of TFEB.
Jose A Martina, Yong Chen, Marjan Gucek, Rosa Puertollano. Autophagy 2012
625
8

Characterization of the CLEAR network reveals an integrated control of cellular clearance pathways.
Michela Palmieri, Soren Impey, Hyojin Kang, Alberto di Ronza, Carl Pelz, Marco Sardiello, Andrea Ballabio. Hum Mol Genet 2011
487
8

Applying systems-level spectral imaging and analysis to reveal the organelle interactome.
Alex M Valm, Sarah Cohen, Wesley R Legant, Justin Melunis, Uri Hershberg, Eric Wait, Andrew R Cohen, Michael W Davidson, Eric Betzig, Jennifer Lippincott-Schwartz. Nature 2017
374
8

The cell biology of mitochondrial membrane dynamics.
Marta Giacomello, Aswin Pyakurel, Christina Glytsou, Luca Scorrano. Nat Rev Mol Cell Biol 2020
172
8

Mitochondria-lysosome contacts regulate mitochondrial Ca2+ dynamics via lysosomal TRPML1.
Wesley Peng, Yvette C Wong, Dimitri Krainc. Proc Natl Acad Sci U S A 2020
42
11

Sorting of lysosomal proteins.
Thomas Braulke, Juan S Bonifacino. Biochim Biophys Acta 2009
469
8

Lysosome biogenesis and lysosomal membrane proteins: trafficking meets function.
Paul Saftig, Judith Klumperman. Nat Rev Mol Cell Biol 2009
866
8


Impaired lysosomal acidification triggers iron deficiency and inflammation in vivo.
King Faisal Yambire, Christine Rostosky, Takashi Watanabe, David Pacheu-Grau, Sylvia Torres-Odio, Angela Sanchez-Guerrero, Ola Senderovich, Esther G Meyron-Holtz, Ira Milosevic, Jens Frahm,[...]. Elife 2019
50
8


PINK1 stabilized by mitochondrial depolarization recruits Parkin to damaged mitochondria and activates latent Parkin for mitophagy.
Noriyuki Matsuda, Shigeto Sato, Kahori Shiba, Kei Okatsu, Keiko Saisho, Clement A Gautier, Yu-Shin Sou, Shinji Saiki, Sumihiro Kawajiri, Fumiaki Sato,[...]. J Cell Biol 2010
6

Alpha-synuclein delays mitophagy and targeting Miro rescues neuron loss in Parkinson's models.
Atossa Shaltouki, Chung-Han Hsieh, Min Joo Kim, Xinnan Wang. Acta Neuropathol 2018
56
7

Mitonuclear communication in homeostasis and stress.
Pedro M Quirós, Adrienne Mottis, Johan Auwerx. Nat Rev Mol Cell Biol 2016
327
6

The multifaceted contributions of mitochondria to cellular metabolism.
Jessica B Spinelli, Marcia C Haigis. Nat Cell Biol 2018
320
6

Mitofusin 2 tethers endoplasmic reticulum to mitochondria.
Olga Martins de Brito, Luca Scorrano. Nature 2008
6

AMPK and mTOR regulate autophagy through direct phosphorylation of Ulk1.
Joungmok Kim, Mondira Kundu, Benoit Viollet, Kun-Liang Guan. Nat Cell Biol 2011
6

Signals from the lysosome: a control centre for cellular clearance and energy metabolism.
Carmine Settembre, Alessandro Fraldi, Diego L Medina, Andrea Ballabio. Nat Rev Mol Cell Biol 2013
857
6


PINK1 and BECN1 relocalize at mitochondria-associated membranes during mitophagy and promote ER-mitochondria tethering and autophagosome formation.
Vania Gelmetti, Priscilla De Rosa, Liliana Torosantucci, Elettra Sara Marini, Alessandra Romagnoli, Martina Di Rienzo, Giuseppe Arena, Domenico Vignone, Gian Maria Fimia, Enza Maria Valente. Autophagy 2017
145
6

Parkin is recruited selectively to impaired mitochondria and promotes their autophagy.
Derek Narendra, Atsushi Tanaka, Der-Fen Suen, Richard J Youle. J Cell Biol 2008
6

Mitophagy and Quality Control Mechanisms in Mitochondrial Maintenance.
Sarah Pickles, Pierre Vigié, Richard J Youle. Curr Biol 2018
584
6

Chloroquine inhibits autophagic flux by decreasing autophagosome-lysosome fusion.
Mario Mauthe, Idil Orhon, Cecilia Rocchi, Xingdong Zhou, Morten Luhr, Kerst-Jan Hijlkema, Robert P Coppes, Nikolai Engedal, Muriel Mari, Fulvio Reggiori. Autophagy 2018
612
6

Mechanism and medical implications of mammalian autophagy.
Ivan Dikic, Zvulun Elazar. Nat Rev Mol Cell Biol 2018
893
6

The lysosomal v-ATPase-Ragulator complex is a common activator for AMPK and mTORC1, acting as a switch between catabolism and anabolism.
Chen-Song Zhang, Bin Jiang, Mengqi Li, Mingjiang Zhu, Yongying Peng, Ya-Lin Zhang, Yu-Qing Wu, Terytty Yang Li, Yu Liang, Zailian Lu,[...]. Cell Metab 2014
264
6

ER tubules mark sites of mitochondrial division.
Jonathan R Friedman, Laura L Lackner, Matthew West, Jared R DiBenedetto, Jodi Nunnari, Gia K Voeltz. Science 2011
6

A lysosome-to-nucleus signalling mechanism senses and regulates the lysosome via mTOR and TFEB.
Carmine Settembre, Roberto Zoncu, Diego L Medina, Francesco Vetrini, Serkan Erdin, SerpilUckac Erdin, Tuong Huynh, Mathieu Ferron, Gerard Karsenty, Michel C Vellard,[...]. EMBO J 2012
6

Autophagy in the cellular energetic balance.
Rajat Singh, Ana Maria Cuervo. Cell Metab 2011
491
6

ATP13A2 deficiency disrupts lysosomal polyamine export.
Sarah van Veen, Shaun Martin, Chris Van den Haute, Veronick Benoy, Joseph Lyons, Roeland Vanhoutte, Jan Pascal Kahler, Jean-Paul Decuypere, Géraldine Gelders, Eric Lambie,[...]. Nature 2020
63
6

VPS35 Deficiency or Mutation Causes Dopaminergic Neuronal Loss by Impairing Mitochondrial Fusion and Function.
Fu-Lei Tang, Wei Liu, Jin-Xia Hu, Joanna Ruth Erion, Jian Ye, Lin Mei, Wen-Cheng Xiong. Cell Rep 2015
148
6

Mitochondrial Dysfunction and Neurodegeneration in Lysosomal Storage Disorders.
Nicoletta Plotegher, Michael R Duchen. Trends Mol Med 2017
64
6

Mitochondria and Lysosomes: Discovering Bonds.
Kiran Todkar, Hema S Ilamathi, Marc Germain. Front Cell Dev Biol 2017
46
8

Lysosomal acidification mechanisms.
Joseph A Mindell. Annu Rev Physiol 2012
547
6

Nanoparticles restore lysosomal acidification defects: Implications for Parkinson and other lysosomal-related diseases.
Mathieu Bourdenx, Jonathan Daniel, Emilie Genin, Federico N Soria, Mireille Blanchard-Desce, Erwan Bezard, Benjamin Dehay. Autophagy 2016
87
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.