A citation-based method for searching scientific literature

Mariona Esquerdo-Barragán, Matthew J Brooks, Vasileios Toulis, Anand Swaroop, Gemma Marfany. Mol Vis 2019
Times Cited: 7







List of co-cited articles
32 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The ubiquitin-proteasome system in retinal health and disease.
Laura Campello, Julián Esteve-Rudd, Nicolás Cuenca, José Martín-Nieto. Mol Neurobiol 2013
62
42

Expression Atlas of the Deubiquitinating Enzymes in the Adult Mouse Retina, Their Evolutionary Diversification and Phenotypic Roles.
Mariona Esquerdo, Xavier Grau-Bové, Alejandro Garanto, Vasileios Toulis, Sílvia Garcia-Monclús, Erica Millo, Ma José López-Iniesta, Víctor Abad-Morales, Iñaki Ruiz-Trillo, Gemma Marfany. PLoS One 2016
9
42


Ubiquitin ligases in oncogenic transformation and cancer therapy.
Daniela Senft, Jianfei Qi, Ze'ev A Ronai. Nat Rev Cancer 2018
221
28

Functional architecture of the retina: development and disease.
Mrinalini Hoon, Haruhisa Okawa, Luca Della Santina, Rachel O L Wong. Prog Retin Eye Res 2014
249
28

Overexpression of ubiquitin carboxyl terminal hydrolase impairs multiple pathways during eye development in Drosophila melanogaster.
Dang Thi Phuong Thao, Phan Nguyen Thuy An, Masamitsu Yamaguchi, Tran LinhThuoc. Cell Tissue Res 2012
13
28

Deubiquitylases from genes to organism.
Michael J Clague, Igor Barsukov, Judy M Coulson, Han Liu, Daniel J Rigden, Sylvie Urbé. Physiol Rev 2013
299
28

The role of ubiquitination in the regulation of primary cilia assembly and disassembly.
Delowar Hossain, William Y Tsang. Semin Cell Dev Biol 2019
14
28

Homozygosity mapping with SNP arrays identifies TRIM32, an E3 ubiquitin ligase, as a Bardet-Biedl syndrome gene (BBS11).
Annie P Chiang, John S Beck, Hsan-Jan Yen, Marwan K Tayeh, Todd E Scheetz, Ruth E Swiderski, Darryl Y Nishimura, Terry A Braun, Kwang-Youn A Kim, Jian Huang,[...]. Proc Natl Acad Sci U S A 2006
270
28

Ubiquitin-proteasome system controls ciliogenesis at the initial step of axoneme extension.
Kousuke Kasahara, Yoshitaka Kawakami, Tohru Kiyono, Shigenobu Yonemura, Yoshifumi Kawamura, Saho Era, Fumio Matsuzaki, Naoki Goshima, Masaki Inagaki. Nat Commun 2014
89
28

Mutations in a BTB-Kelch protein, KLHL7, cause autosomal-dominant retinitis pigmentosa.
James S Friedman, Joseph W Ray, Naushin Waseem, Kory Johnson, Matthew J Brooks, Therése Hugosson, Debra Breuer, Kari E Branham, Daniel S Krauth, Sara J Bowne,[...]. Am J Hum Genet 2009
78
28

Mutations in TOPORS cause autosomal dominant retinitis pigmentosa with perivascular retinal pigment epithelium atrophy.
Christina F Chakarova, Myrto G Papaioannou, Hemant Khanna, Irma Lopez, Naushin Waseem, Amna Shah, Torsten Theis, James Friedman, Cecilia Maubaret, Kinga Bujakowska,[...]. Am J Hum Genet 2007
62
28

The ubiquitin system.
A Hershko, A Ciechanover. Annu Rev Biochem 1998
28


Biallelic mutations in USP45, encoding a deubiquitinating enzyme, are associated with Leber congenital amaurosis.
Zhen Yi, Jiamin Ouyang, Wenmin Sun, Xueshan Xiao, Shiqiang Li, Xiaoyun Jia, Panfeng Wang, Qingjiong Zhang. J Med Genet 2019
11
28

TOPORS, implicated in retinal degeneration, is a cilia-centrosomal protein.
Christina F Chakarova, Hemant Khanna, Amna Z Shah, Suresh B Patil, Tina Sedmak, Carlos A Murga-Zamalloa, Myrto G Papaioannou, Kerstin Nagel-Wolfrum, Irma Lopez, Peter Munro,[...]. Hum Mol Genet 2011
42
28

Roles of STAT3/SOCS3 pathway in regulating the visual function and ubiquitin-proteasome-dependent degradation of rhodopsin during retinal inflammation.
Yoko Ozawa, Keiko Nakao, Toshihide Kurihara, Takuya Shimazaki, Shigeto Shimmura, Susumu Ishida, Akihiko Yoshimura, Kazuo Tsubota, Hideyuki Okano. J Biol Chem 2008
55
28

Ubiquitin and proteasomes in transcription.
Fuqiang Geng, Sabine Wenzel, William P Tansey. Annu Rev Biochem 2012
201
28

Recognition of the polyubiquitin proteolytic signal.
J S Thrower, L Hoffman, M Rechsteiner, C M Pickart. EMBO J 2000
28

Dysregulation of Ubiquitin-Proteasome System in Neurodegenerative Diseases.
Qiuyang Zheng, Timothy Huang, Lishan Zhang, Ying Zhou, Hong Luo, Huaxi Xu, Xin Wang. Front Aging Neurosci 2016
141
28

Breaking the chains: structure and function of the deubiquitinases.
David Komander, Michael J Clague, Sylvie Urbé. Nat Rev Mol Cell Biol 2009
28

Human ubiquitin specific protease 31 is a deubiquitinating enzyme implicated in activation of nuclear factor-kappaB.
Christos Tzimas, Gianna Michailidou, Minas Arsenakis, Elliott Kieff, George Mosialos, Eudoxia G Hatzivassiliou. Cell Signal 2006
60
28

Deubiquitinase USP48 promotes ATRA-induced granulocytic differentiation of acute promyelocytic leukemia cells.
Lianlian Li, Yong Wang, Xiaoyu Zhang, Guanhua Song, Qiang Guo, Zhiyong Zhang, Yutao Diao, Haipeng Yin, Hongyan Liu, Guosheng Jiang. Int J Oncol 2018
8
28

Map of synthetic rescue interactions for the Fanconi anemia DNA repair pathway identifies USP48.
Georgia Velimezi, Lydia Robinson-Garcia, Francisco Muñoz-Martínez, Wouter W Wiegant, Joana Ferreira da Silva, Michel Owusu, Martin Moder, Marc Wiedner, Sara Brin Rosenthal, Kathleen M Fisch,[...]. Nat Commun 2018
22
28


Gli1-induced deubiquitinase USP48 aids glioblastoma tumorigenesis by stabilizing Gli1.
Aidong Zhou, Kangyu Lin, Sicong Zhang, Li Ma, Jianfei Xue, Saint-Aaron Morris, Kenneth D Aldape, Suyun Huang. EMBO Rep 2017
46
28



Genome-wide loss-of-function analysis of deubiquitylating enzymes for zebrafish development.
William K F Tse, Birgit Eisenhaber, Steven H K Ho, Qimei Ng, Frank Eisenhaber, Yun-Jin Jiang. BMC Genomics 2009
56
28

USP48 restrains resection by site-specific cleavage of the BRCA1 ubiquitin mark from H2A.
Michael Uckelmann, Ruth M Densham, Roy Baas, Herrie H K Winterwerp, Alexander Fish, Titia K Sixma, Joanna R Morris. Nat Commun 2018
54
28

miR-489-3p promotes malignant progression of non-small cell lung cancer through the inactivation of Wnt/β-catenin signaling pathway via regulating USP48.
Pei Zhang, Li Li, Bing Wang, Xu Ran, Shengrong Yang, Yujie Luo, Yunhe Li, Zhenghong Wang, Yi Liu, Bing Zhu. Respir Res 2022
3
66

USP48 Is Upregulated by Mettl14 to Attenuate Hepatocellular Carcinoma via Regulating SIRT6 Stabilization.
Lutao Du, Yang Li, Min Kang, Maoxiao Feng, Yidan Ren, Hongliang Dai, Yumin Wang, Yunshan Wang, Bo Tang. Cancer Res 2021
19
28

The vertebrate primary cilium in development, homeostasis, and disease.
Jantje M Gerdes, Erica E Davis, Nicholas Katsanis. Cell 2009
539
14

Ciliopathies.
Friedhelm Hildebrandt, Thomas Benzing, Nicholas Katsanis. N Engl J Med 2011
900
14

Bi-allelic Mutations in KLHL7 Cause a Crisponi/CISS1-like Phenotype Associated with Early-Onset Retinitis Pigmentosa.
Andrea Angius, Paolo Uva, Insa Buers, Manuela Oppo, Alessandro Puddu, Stefano Onano, Ivana Persico, Angela Loi, Loredana Marcia, Wolfgang Höhne,[...]. Am J Hum Genet 2016
23
14

The retinal pigment epithelium in health and disease.
J R Sparrow, D Hicks, C P Hamel. Curr Mol Med 2010
362
14


Mutations in the TOPORS gene cause 1% of autosomal dominant retinitis pigmentosa.
Sara J Bowne, Lori S Sullivan, Anisa I Gire, David G Birch, Dianna Hughbanks-Wheaton, John R Heckenlively, Stephen P Daiger. Mol Vis 2008
34
14

EGF receptor kinase suppresses ciliogenesis through activation of USP8 deubiquitinase.
Kousuke Kasahara, Hiromasa Aoki, Tohru Kiyono, Shujie Wang, Harumi Kagiwada, Mizuki Yuge, Toshio Tanaka, Yuhei Nishimura, Akira Mizoguchi, Naoki Goshima,[...]. Nat Commun 2018
41
14


The deubiquitinating enzyme CYLD controls apical docking of basal bodies in ciliated epithelial cells.
Thibaut Eguether, Maria A Ermolaeva, Yongge Zhao, Marion C Bonnet, Ashish Jain, Manolis Pasparakis, Gilles Courtois, Anne-Marie Tassin. Nat Commun 2014
27
14

Photoreceptor degeneration: genetic and mechanistic dissection of a complex trait.
Alan F Wright, Christina F Chakarova, Mai M Abd El-Aziz, Shomi S Bhattacharya. Nat Rev Genet 2010
418
14

The deubiquitinating enzyme Usp14 controls ciliogenesis and Hedgehog signaling.
Filomena Massa, Roberta Tammaro, Miguel A Prado, Marcella Cesana, Byung-Hoon Lee, Daniel Finley, Brunella Franco, Manuela Morleo. Hum Mol Genet 2019
20
14

Systematic survey of deubiquitinase localization identifies USP21 as a regulator of centrosome- and microtubule-associated functions.
Sylvie Urbé, Han Liu, Sebastian D Hayes, Claire Heride, Daniel J Rigden, Michael J Clague. Mol Biol Cell 2012
90
14

mRNA expression analysis of the SUMO pathway genes in the adult mouse retina.
Víctor Abad-Morales, Elena B Domènech, Alejandro Garanto, Gemma Marfany. Biol Open 2015
7
14

Mutations in the pre-mRNA splicing-factor genes PRPF3, PRPF8, and PRPF31 in Spanish families with autosomal dominant retinitis pigmentosa.
María Martínez-Gimeno, María José Gamundi, Imma Hernan, Miquel Maseras, Elena Millá, Carmen Ayuso, Blanca García-Sandoval, Magdalena Beneyto, Concha Vilela, Montserrat Baiget,[...]. Invest Ophthalmol Vis Sci 2003
75
14

Proteomics of Primary Cilia by Proximity Labeling.
David U Mick, Rachel B Rodrigues, Ryan D Leib, Christopher M Adams, Allis S Chien, Steven P Gygi, Maxence V Nachury. Dev Cell 2015
225
14

Pias3-dependent SUMOylation directs rod photoreceptor development.
Akishi Onishi, Guang-Hua Peng, Chengda Hsu, Uel Alexis, Shiming Chen, Seth Blackshaw. Neuron 2009
91
14

Lighting a candle in the dark: advances in genetics and gene therapy of recessive retinal dystrophies.
Anneke I den Hollander, Aaron Black, Jean Bennett, Frans P M Cremers. J Clin Invest 2010
163
14

A new cellular stress response that triggers centriolar satellite reorganization and ciliogenesis.
Bine H Villumsen, Jannie R Danielsen, Lou Povlsen, Kathrine B Sylvestersen, Andreas Merdes, Petra Beli, Yun-Gui Yang, Chunaram Choudhary, Michael L Nielsen, Niels Mailand,[...]. EMBO J 2013
93
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.