A citation-based method for searching scientific literature

Saskia E J de Vries, Jerome A Lecoq, Michael A Buice, Peter A Groblewski, Gabriel K Ocker, Michael Oliver, David Feng, Nicholas Cain, Peter Ledochowitsch, Daniel Millman, Kate Roll, Marina Garrett, Tom Keenan, Leonard Kuan, Stefan Mihalas, Shawn Olsen, Carol Thompson, Wayne Wakeman, Jack Waters, Derric Williams, Chris Barber, Nathan Berbesque, Brandon Blanchard, Nicholas Bowles, Shiella D Caldejon, Linzy Casal, Andrew Cho, Sissy Cross, Chinh Dang, Tim Dolbeare, Melise Edwards, John Galbraith, Nathalie Gaudreault, Terri L Gilbert, Fiona Griffin, Perry Hargrave, Robert Howard, Lawrence Huang, Sean Jewell, Nika Keller, Ulf Knoblich, Josh D Larkin, Rachael Larsen, Chris Lau, Eric Lee, Felix Lee, Arielle Leon, Lu Li, Fuhui Long, Jennifer Luviano, Kyla Mace, Thuyanh Nguyen, Jed Perkins, Miranda Robertson, Sam Seid, Eric Shea-Brown, Jianghong Shi, Nathan Sjoquist, Cliff Slaughterbeck, David Sullivan, Ryan Valenza, Casey White, Ali Williford, Daniela M Witten, Jun Zhuang, Hongkui Zeng, Colin Farrell, Lydia Ng, Amy Bernard, John W Phillips, R Clay Reid, Christof Koch. Nat Neurosci 2020
Times Cited: 80







List of co-cited articles
652 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
30

Functional specialization of seven mouse visual cortical areas.
James H Marshel, Marina E Garrett, Ian Nauhaus, Edward M Callaway. Neuron 2011
240
25

Spontaneous behaviors drive multidimensional, brainwide activity.
Carsen Stringer, Marius Pachitariu, Nicholas Steinmetz, Charu Bai Reddy, Matteo Carandini, Kenneth D Harris. Science 2019
289
17


Highly selective receptive fields in mouse visual cortex.
Cristopher M Niell, Michael P Stryker. J Neurosci 2008
617
16

Functional specialization of mouse higher visual cortical areas.
Mark L Andermann, Aaron M Kerlin, Demetris K Roumis, Lindsey L Glickfeld, R Clay Reid. Neuron 2011
244
16

Survey of spiking in the mouse visual system reveals functional hierarchy.
Joshua H Siegle, Xiaoxuan Jia, Séverine Durand, Sam Gale, Corbett Bennett, Nile Graddis, Greggory Heller, Tamina K Ramirez, Hannah Choi, Jennifer A Luviano,[...]. Nature 2021
47
27

Topography and areal organization of mouse visual cortex.
Marina E Garrett, Ian Nauhaus, James H Marshel, Edward M Callaway. J Neurosci 2014
150
15

Fully integrated silicon probes for high-density recording of neural activity.
James J Jun, Nicholas A Steinmetz, Joshua H Siegle, Daniel J Denman, Marius Bauza, Brian Barbarits, Albert K Lee, Costas A Anastassiou, Alexandru Andrei, Çağatay Aydın,[...]. Nature 2017
566
15

Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data.
Eftychios A Pnevmatikakis, Daniel Soudry, Yuanjun Gao, Timothy A Machado, Josh Merel, David Pfau, Thomas Reardon, Yu Mu, Clay Lacefield, Weijian Yang,[...]. Neuron 2016
363
15

Cortico-cortical projections in mouse visual cortex are functionally target specific.
Lindsey L Glickfeld, Mark L Andermann, Vincent Bonin, R Clay Reid. Nat Neurosci 2013
177
13

A Suite of Transgenic Driver and Reporter Mouse Lines with Enhanced Brain-Cell-Type Targeting and Functionality.
Tanya L Daigle, Linda Madisen, Travis A Hage, Matthew T Valley, Ulf Knoblich, Rylan S Larsen, Marc M Takeno, Lawrence Huang, Hong Gu, Rachael Larsen,[...]. Cell 2018
212
13

Area map of mouse visual cortex.
Quanxin Wang, Andreas Burkhalter. J Comp Neurol 2007
291
13

Higher-Order Areas of the Mouse Visual Cortex.
Lindsey L Glickfeld, Shawn R Olsen. Annu Rev Vis Sci 2017
61
18

Fast online deconvolution of calcium imaging data.
Johannes Friedrich, Pengcheng Zhou, Liam Paninski. PLoS Comput Biol 2017
121
12


Classification of electrophysiological and morphological neuron types in the mouse visual cortex.
Nathan W Gouwens, Staci A Sorensen, Jim Berg, Changkyu Lee, Tim Jarsky, Jonathan Ting, Susan M Sunkin, David Feng, Costas A Anastassiou, Eliza Barkan,[...]. Nat Neurosci 2019
122
12

Vision and Locomotion Shape the Interactions between Neuron Types in Mouse Visual Cortex.
Mario Dipoppa, Adam Ranson, Michael Krumin, Marius Pachitariu, Matteo Carandini, Kenneth D Harris. Neuron 2018
101
11

A cortical circuit for gain control by behavioral state.
Yu Fu, Jason M Tucciarone, J Sebastian Espinosa, Nengyin Sheng, Daniel P Darcy, Roger A Nicoll, Z Josh Huang, Michael P Stryker. Cell 2014
490
11

An extended retinotopic map of mouse cortex.
Jun Zhuang, Lydia Ng, Derric Williams, Matthew Valley, Yang Li, Marina Garrett, Jack Waters. Elife 2017
94
11

Arousal and locomotion make distinct contributions to cortical activity patterns and visual encoding.
Martin Vinck, Renata Batista-Brito, Ulf Knoblich, Jessica A Cardin. Neuron 2015
320
11

EXACT SPIKE TRAIN INFERENCE VIA ℓ0 OPTIMIZATION.
Sean Jewell, Daniela Witten. Ann Appl Stat 2018
18
44

High-performance calcium sensors for imaging activity in neuronal populations and microcompartments.
Hod Dana, Yi Sun, Boaz Mohar, Brad K Hulse, Aaron M Kerlin, Jeremy P Hasseman, Getahun Tsegaye, Arthur Tsang, Allan Wong, Ronak Patel,[...]. Nat Methods 2019
264
10

Removable cranial windows for long-term imaging in awake mice.
Glenn J Goldey, Demetris K Roumis, Lindsey L Glickfeld, Aaron M Kerlin, R Clay Reid, Vincent Bonin, Dorothy P Schafer, Mark L Andermann. Nat Protoc 2014
157
10

A mesoscale connectome of the mouse brain.
Seung Wook Oh, Julie A Harris, Lydia Ng, Brent Winslow, Nicholas Cain, Stefan Mihalas, Quanxin Wang, Chris Lau, Leonard Kuan, Alex M Henry,[...]. Nature 2014
10

DeepLabCut: markerless pose estimation of user-defined body parts with deep learning.
Alexander Mathis, Pranav Mamidanna, Kevin M Cury, Taiga Abe, Venkatesh N Murthy, Mackenzie Weygandt Mathis, Matthias Bethge. Nat Neurosci 2018
628
10

Transgenic mice for intersectional targeting of neural sensors and effectors with high specificity and performance.
Linda Madisen, Aleena R Garner, Daisuke Shimaoka, Amy S Chuong, Nathan C Klapoetke, Lu Li, Alexander van der Bourg, Yusuke Niino, Ladan Egolf, Claudio Monetti,[...]. Neuron 2015
517
10

Inhibition of inhibition in visual cortex: the logic of connections between molecularly distinct interneurons.
Carsten K Pfeffer, Mingshan Xue, Miao He, Z Josh Huang, Massimo Scanziani. Nat Neurosci 2013
699
10

Functional specificity of local synaptic connections in neocortical networks.
Ho Ko, Sonja B Hofer, Bruno Pichler, Katherine A Buchanan, P Jesper Sjöström, Thomas D Mrsic-Flogel. Nature 2011
466
10

Single-trial neural dynamics are dominated by richly varied movements.
Simon Musall, Matthew T Kaufman, Ashley L Juavinett, Steven Gluf, Anne K Churchland. Nat Neurosci 2019
193
10

High-dimensional geometry of population responses in visual cortex.
Carsen Stringer, Marius Pachitariu, Nicholas Steinmetz, Matteo Carandini, Kenneth D Harris. Nature 2019
99
10

Automated analysis of cellular signals from large-scale calcium imaging data.
Eran A Mukamel, Axel Nimmerjahn, Mark J Schnitzer. Neuron 2009
353
10

Accurate spike estimation from noisy calcium signals for ultrafast three-dimensional imaging of large neuronal populations in vivo.
Thomas Deneux, Attila Kaszas, Gergely Szalay, Gergely Katona, Tamás Lakner, Amiram Grinvald, Balázs Rózsa, Ivo Vanzetta. Nat Commun 2016
83
8

Imaging large-scale neural activity with cellular resolution in awake, mobile mice.
Daniel A Dombeck, Anton N Khabbaz, Forrest Collman, Thomas L Adelman, David W Tank. Neuron 2007
642
8

Broadly tuned response properties of diverse inhibitory neuron subtypes in mouse visual cortex.
Aaron M Kerlin, Mark L Andermann, Vladimir K Berezovskii, R Clay Reid. Neuron 2010
364
8

The logic of single-cell projections from visual cortex.
Yunyun Han, Justus M Kebschull, Robert A A Campbell, Devon Cowan, Fabia Imhof, Anthony M Zador, Thomas D Mrsic-Flogel. Nature 2018
125
8

Gateways of ventral and dorsal streams in mouse visual cortex.
Quanxin Wang, Enquan Gao, Andreas Burkhalter. J Neurosci 2011
133
8


Fast nonconvex deconvolution of calcium imaging data.
Sean W Jewell, Toby Dylan Hocking, Paul Fearnhead, Daniela M Witten. Biostatistics 2020
12
58

Automated identification of mouse visual areas with intrinsic signal imaging.
Ashley L Juavinett, Ian Nauhaus, Marina E Garrett, Jun Zhuang, Edward M Callaway. Nat Protoc 2017
38
18


Waking State: Rapid Variations Modulate Neural and Behavioral Responses.
Matthew J McGinley, Martin Vinck, Jacob Reimer, Renata Batista-Brito, Edward Zagha, Cathryn R Cadwell, Andreas S Tolias, Jessica A Cardin, David A McCormick. Neuron 2015
313
8

Controlling Visually Guided Behavior by Holographic Recalling of Cortical Ensembles.
Luis Carrillo-Reid, Shuting Han, Weijian Yang, Alejandro Akrouh, Rafael Yuste. Cell 2019
83
8

Relationship between simultaneously recorded spiking activity and fluorescence signal in GCaMP6 transgenic mice.
Lawrence Huang, Peter Ledochowitsch, Ulf Knoblich, Jérôme Lecoq, Gabe J Murphy, R Clay Reid, Saskia Ej de Vries, Christof Koch, Hongkui Zeng, Michael A Buice,[...]. Elife 2021
33
21

Fast nonnegative deconvolution for spike train inference from population calcium imaging.
Joshua T Vogelstein, Adam M Packer, Timothy A Machado, Tanya Sippy, Baktash Babadi, Rafael Yuste, Liam Paninski. J Neurophysiol 2010
215
7

Robustness of Spike Deconvolution for Neuronal Calcium Imaging.
Marius Pachitariu, Carsen Stringer, Kenneth D Harris. J Neurosci 2018
50
12

High-speed in vivo calcium imaging reveals neuronal network activity with near-millisecond precision.
Benjamin F Grewe, Dominik Langer, Hansjörg Kasper, Björn M Kampa, Fritjof Helmchen. Nat Methods 2010
281
7

Sensitive red protein calcium indicators for imaging neural activity.
Hod Dana, Boaz Mohar, Yi Sun, Sujatha Narayan, Andrew Gordus, Jeremy P Hasseman, Getahun Tsegaye, Graham T Holt, Amy Hu, Deepika Walpita,[...]. Elife 2016
411
7

A neural circuit for spatial summation in visual cortex.
Hillel Adesnik, William Bruns, Hiroki Taniguchi, Z Josh Huang, Massimo Scanziani. Nature 2012
369
7

Pattern and Component Motion Responses in Mouse Visual Cortical Areas.
Ashley L Juavinett, Edward M Callaway. Curr Biol 2015
52
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.