A citation-based method for searching scientific literature

Mohd Amir, Shahzaib Ahamad, Taj Mohammad, Deeba Shamim Jairajpuri, Gulam Mustafa Hasan, Ravins Dohare, Asimul Islam, Faizan Ahmad, Md Imtaiyaz Hassan. J Biomol Struct Dyn 2021
Times Cited: 9







List of co-cited articles
69 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Investigation of deleterious effects of nsSNPs in the POT1 gene: a structural genomics-based approach to understand the mechanism of cancer development.
Mohd Amir, Vijay Kumar, Taj Mohammad, Ravins Dohare, Afzal Hussain, Md Tabish Rehman, Perwez Alam, Mohamed F Alajmi, Asimul Islam, Faizan Ahmad,[...]. J Cell Biochem 2019
18
55

Structural and functional impact of non-synonymous SNPs in the CST complex subunit TEN1: structural genomics approach.
Mohd Amir, Vijay Kumar, Taj Mohammad, Ravins Dohare, Md Tabish Rehman, Mohamed F Alajmi, Afzal Hussain, Faizan Ahmad, Md Imtaiyaz Hassan. Biosci Rep 2019
11
55

VMD: visual molecular dynamics.
W Humphrey, A Dalke, K Schulten. J Mol Graph 1996
44


Investigating architecture and structure-function relationships in cold shock DNA-binding domain family using structural genomics-based approach.
Mohd Amir, Vijay Kumar, Ravins Dohare, Md Tabish Rehman, Afzal Hussain, Mohamed F Alajmi, Hesham R El-Seedi, Hani Mutlak A Hassan, Asimul Islam, Faizan Ahmad,[...]. Int J Biol Macromol 2019
8
37

Impact of Gln94Glu mutation on the structure and function of protection of telomere 1, a cause of cutaneous familial melanoma.
Mohd Amir, Shahnawaz Ahmad, Shahzaib Ahamad, Vijay Kumar, Taj Mohammad, Ravins Dohare, Mohamed F Alajmi, Tabish Rehman, Afzal Hussain, Asimul Islam,[...]. J Biomol Struct Dyn 2020
13
33

Structural Analysis and Conformational Dynamics of STN1 Gene Mutations Involved in Coat Plus Syndrome.
Mohd Amir, Taj Mohammad, Vijay Kumar, Mohammed F Alajmi, Md Tabish Rehman, Afzal Hussain, Perwez Alam, Ravins Dohare, Asimul Islam, Faizan Ahmad,[...]. Front Mol Biosci 2019
16
33

Mammalian telomeres end in a large duplex loop.
J D Griffith, L Comeau, S Rosenfield, R M Stansel, A Bianchi, H Moss, T de Lange. Cell 1999
33


Advancements in Docking and Molecular Dynamics Simulations Towards Ligand-receptor Interactions and Structure-function Relationships.
Ahmad Abu Turab Naqvi, Taj Mohammad, Gulam Mustafa Hasan, Md Imtaiyaz Hassan. Curr Top Med Chem 2018
39
33

Rare missense variants in POT1 predispose to familial cutaneous malignant melanoma.
Jianxin Shi, Xiaohong R Yang, Bari Ballew, Melissa Rotunno, Donato Calista, Maria Concetta Fargnoli, Paola Ghiorzo, Brigitte Bressac-de Paillerets, Eduardo Nagore, Marie Francoise Avril,[...]. Nat Genet 2014
188
22


POT1-TPP1 differentially regulates telomerase via POT1 His266 and as a function of single-stranded telomere DNA length.
Mengyuan Xu, Janna Kiselar, Tawna L Whited, Wilnelly Hernandez-Sanchez, Derek J Taylor. Proc Natl Acad Sci U S A 2019
10
22

TPP1 is a homologue of ciliate TEBP-beta and interacts with POT1 to recruit telomerase.
Huawei Xin, Dan Liu, Ma Wan, Amin Safari, Hyeung Kim, Wen Sun, Matthew S O'Connor, Zhou Songyang. Nature 2007
355
22

The POT1-TPP1 telomere complex is a telomerase processivity factor.
Feng Wang, Elaine R Podell, Arthur J Zaug, Yuting Yang, Paul Baciu, Thomas R Cech, Ming Lei. Nature 2007
456
22

Structure of the TRFH dimerization domain of the human telomeric proteins TRF1 and TRF2.
L Fairall, L Chapman, H Moss, T de Lange, D Rhodes. Mol Cell 2001
152
22

Mammalian telomeres resemble fragile sites and require TRF1 for efficient replication.
Agnel Sfeir, Settapong T Kosiyatrakul, Dirk Hockemeyer, Sheila L MacRae, Jan Karlseder, Carl L Schildkraut, Titia de Lange. Cell 2009
636
22

POT1 loss-of-function variants predispose to familial melanoma.
Carla Daniela Robles-Espinoza, Mark Harland, Andrew J Ramsay, Lauren G Aoude, Víctor Quesada, Zhihao Ding, Karen A Pooley, Antonia L Pritchard, Jessamy C Tiffen, Mia Petljak,[...]. Nat Genet 2014
208
22

Germline mutations in shelterin complex genes are associated with familial glioma.
Matthew N Bainbridge, Georgina N Armstrong, M Monica Gramatges, Alison A Bertuch, Shalini N Jhangiani, Harsha Doddapaneni, Lora Lewis, Joseph Tombrello, Spyros Tsavachidis, Yanhong Liu,[...]. J Natl Cancer Inst 2014
125
22

Multiple POT1-TPP1 proteins coat and compact long telomeric single-stranded DNA.
Derek J Taylor, Elaine R Podell, Dylan J Taatjes, Thomas R Cech. J Mol Biol 2011
26
22

The human CST complex is a terminator of telomerase activity.
Liuh-Yow Chen, Sophie Redon, Joachim Lingner. Nature 2012
191
22

TIN2, a new regulator of telomere length in human cells.
S H Kim, P Kaminker, J Campisi. Nat Genet 1999
385
22

Nucleic acid recognition by OB-fold proteins.
Douglas L Theobald, Rachel M Mitton-Fry, Deborah S Wuttke. Annu Rev Biophys Biomol Struct 2003
339
22

A mutation in the POT1 gene is responsible for cardiac angiosarcoma in TP53-negative Li-Fraumeni-like families.
Oriol Calvete, Paula Martinez, Pablo Garcia-Pavia, Carlos Benitez-Buelga, Beatriz Paumard-Hernández, Victoria Fernandez, Fernando Dominguez, Clara Salas, Nuria Romero-Laorden, Jesus Garcia-Donas,[...]. Nat Commun 2015
78
22

Structural and functional analysis of the human POT1-TPP1 telomeric complex.
Cory Rice, Prashanth Krishna Shastrula, Andrew V Kossenkov, Robert Hills, Duncan M Baird, Louise C Showe, Tzanko Doukov, Susan Janicki, Emmanuel Skordalakes. Nat Commun 2017
46
22

DNA self-recognition in the structure of Pot1 bound to telomeric single-stranded DNA.
Ming Lei, Elaine R Podell, Peter Baumann, Thomas R Cech. Nature 2003
154
22



Telomere protection by TPP1/POT1 requires tethering to TIN2.
Kaori K Takai, Tatsuya Kibe, Jill R Donigian, David Frescas, Titia de Lange. Mol Cell 2011
137
22

Association of the POT1 Germline Missense Variant p.I78T With Familial Melanoma.
Kim Wong, Carla Daniela Robles-Espinoza, David Rodriguez, Saskia S Rudat, Susana Puig, Miriam Potrony, Chi C Wong, James Hewinson, Paula Aguilera, Joan Anton Puig-Butille,[...]. JAMA Dermatol 2019
15
22

Alternative lengthening of telomeres: models, mechanisms and implications.
Anthony J Cesare, Roger R Reddel. Nat Rev Genet 2010
562
22

A shared docking motif in TRF1 and TRF2 used for differential recruitment of telomeric proteins.
Yong Chen, Yuting Yang, Megan van Overbeek, Jill R Donigian, Paul Baciu, Titia de Lange, Ming Lei. Science 2008
177
22

Human protection of telomeres 1 (POT1) is a negative regulator of telomerase activity in vitro.
Colleen Kelleher, Isabel Kurth, Joachim Lingner. Mol Cell Biol 2005
138
22

Shelterin proteins and cancer.
Trupti Nv Patel, Richa Vasan, Divanshu Gupta, Jay Patel, Manjari Trivedi. Asian Pac J Cancer Prev 2015
12
22



A POT1 mutation implicates defective telomere end fill-in and telomere truncations in Coats plus.
Hiroyuki Takai, Emma Jenkinson, Shaheen Kabir, Riyana Babul-Hirji, Nasrin Najm-Tehrani, David A Chitayat, Yanick J Crow, Titia de Lange. Genes Dev 2016
45
22

Human POT1 disrupts telomeric G-quadruplexes allowing telomerase extension in vitro.
Arthur J Zaug, Elaine R Podell, Thomas R Cech. Proc Natl Acad Sci U S A 2005
266
22

POT1 mutations cause telomere dysfunction in chronic lymphocytic leukemia.
Andrew J Ramsay, Víctor Quesada, Miguel Foronda, Laura Conde, Alejandra Martínez-Trillos, Neus Villamor, David Rodríguez, Agnieszka Kwarciak, Cecilia Garabaya, Mercedes Gallardo,[...]. Nat Genet 2013
179
22

Germ line mutations in shelterin complex genes are associated with familial chronic lymphocytic leukemia.
Helen E Speedy, Ben Kinnersley, Daniel Chubb, Peter Broderick, Philip J Law, Kevin Litchfield, Sandrine Jayne, Martin J S Dyer, Claire Dearden, George A Follows,[...]. Blood 2016
47
22

Sequence, structure and evolutionary analysis of cold shock domain proteins, a member of OB fold family.
Mohd Amir, Vijay Kumar, Ravins Dohare, Asimul Islam, Faizan Ahmad, Md Imtaiyaz Hassan. J Evol Biol 2018
12
22

Functional dissection of human and mouse POT1 proteins.
Wilhelm Palm, Dirk Hockemeyer, Tatsuya Kibe, Titia de Lange. Mol Cell Biol 2009
82
22

How shelterin protects mammalian telomeres.
Wilhelm Palm, Titia de Lange. Annu Rev Genet 2008
22

Structural Features of Nucleoprotein CST/Shelterin Complex Involved in the Telomere Maintenance and Its Association with Disease Mutations.
Mohd Amir, Parvez Khan, Aarfa Queen, Ravins Dohare, Mohamed F Alajmi, Afzal Hussain, Asimul Islam, Faizan Ahmad, Imtaiyaz Hassan. Cells 2020
9
22

ENCoM server: exploring protein conformational space and the effect of mutations on protein function and stability.
Vincent Frappier, Matthieu Chartier, Rafael J Najmanovich. Nucleic Acids Res 2015
77
22

Identification and evaluation of bioactive natural products as potential inhibitors of human microtubule affinity-regulating kinase 4 (MARK4).
Taj Mohammad, Faez Iqbal Khan, Kevin A Lobb, Asimul Islam, Faizan Ahmad, Md Imtaiyaz Hassan. J Biomol Struct Dyn 2019
42
22

DynaMut: predicting the impact of mutations on protein conformation, flexibility and stability.
Carlos Hm Rodrigues, Douglas Ev Pires, David B Ascher. Nucleic Acids Res 2018
232
22


Large scale analysis of the mutational landscape in β-glucuronidase: A major player of mucopolysaccharidosis type VII.
Faez Iqbal Khan, Mohd Shahbaaz, Krishna Bisetty, Abdul Waheed, William S Sly, Faizan Ahmad, Md Imtaiyaz Hassan. Gene 2016
51
22

Computing disease-linked SOD1 mutations: deciphering protein stability and patient-phenotype relations.
Vijay Kumar, Safikur Rahman, Hani Choudhry, Mazin A Zamzami, Mohammad Sarwar Jamal, Asimul Islam, Faizan Ahmad, Md Imtaiyaz Hassan. Sci Rep 2017
20
22


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.