A citation-based method for searching scientific literature


List of co-cited articles
507 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Establishing neural crest identity: a gene regulatory recipe.
Marcos Simões-Costa, Marianne E Bronner. Development 2015
346
37

Reconstruction of the Global Neural Crest Gene Regulatory Network In Vivo.
Ruth M Williams, Ivan Candido-Ferreira, Emmanouela Repapi, Daria Gavriouchkina, Upeka Senanayake, Irving T C Ling, Jelena Telenius, Stephen Taylor, Jim Hughes, Tatjana Sauka-Spengler. Dev Cell 2019
65
35

From Pioneer to Repressor: Bimodal foxd3 Activity Dynamically Remodels Neural Crest Regulatory Landscape In Vivo.
Martyna Lukoseviciute, Daria Gavriouchkina, Ruth M Williams, Tatiana Hochgreb-Hagele, Upeka Senanayake, Vanessa Chong-Morrison, Supat Thongjuea, Emmanouela Repapi, Adam Mead, Tatjana Sauka-Spengler. Dev Cell 2018
55
35

Reprogramming of avian neural crest axial identity and cell fate.
Marcos Simoes-Costa, Marianne E Bronner. Science 2016
93
32


Spatiotemporal structure of cell fate decisions in murine neural crest.
Ruslan Soldatov, Marketa Kaucka, Maria Eleni Kastriti, Julian Petersen, Tatiana Chontorotzea, Lukas Englmaier, Natalia Akkuratova, Yunshi Yang, Martin Häring, Viacheslav Dyachuk,[...]. Science 2019
200
29

Dynamic transcriptional signature and cell fate analysis reveals plasticity of individual neural plate border cells.
Daniela Roellig, Johanna Tan-Cabugao, Sevan Esaian, Marianne E Bronner. Elife 2017
54
29

Specification of the neural crest occurs during gastrulation and requires Pax7.
Martín L Basch, Marianne Bronner-Fraser, Martín I García-Castro. Nature 2006
261
29

Fast gapped-read alignment with Bowtie 2.
Ben Langmead, Steven L Salzberg. Nat Methods 2012
27

Dynamic and differential regulation of stem cell factor FoxD3 in the neural crest is Encrypted in the genome.
Marcos S Simões-Costa, Sonja J McKeown, Joanne Tan-Cabugao, Tatjana Sauka-Spengler, Marianne E Bronner. PLoS Genet 2012
92
27

Genomic code for Sox10 activation reveals a key regulatory enhancer for cranial neural crest.
Paola Betancur, Marianne Bronner-Fraser, Tatjana Sauka-Spengler. Proc Natl Acad Sci U S A 2010
141
24

Control of neural crest multipotency by Wnt signaling and the Lin28/let-7 axis.
Debadrita Bhattacharya, Megan Rothstein, Ana Paula Azambuja, Marcos Simoes-Costa. Elife 2018
30
30

Axud1 Integrates Wnt Signaling and Transcriptional Inputs to Drive Neural Crest Formation.
Marcos Simões-Costa, Michael Stone, Marianne E Bronner. Dev Cell 2015
45
24

Regulatory Logic Underlying Diversification of the Neural Crest.
Megan L Martik, Marianne E Bronner. Trends Genet 2017
92
24

NEURODEVELOPMENT. Shared regulatory programs suggest retention of blastula-stage potential in neural crest cells.
Elsy Buitrago-Delgado, Kara Nordin, Anjali Rao, Lauren Geary, Carole LaBonne. Science 2015
98
24

A gene regulatory network orchestrates neural crest formation.
Tatjana Sauka-Spengler, Marianne Bronner-Fraser. Nat Rev Mol Cell Biol 2008
497
24

Reiterative AP2a activity controls sequential steps in the neural crest gene regulatory network.
Noémie de Crozé, Frédérique Maczkowiak, Anne H Monsoro-Burq. Proc Natl Acad Sci U S A 2011
119
24


TFAP2 paralogs regulate melanocyte differentiation in parallel with MITF.
Hannah E Seberg, Eric Van Otterloo, Stacie K Loftus, Huan Liu, Greg Bonde, Ramakrishna Sompallae, Derek E Gildea, Juan F Santana, J Robert Manak, William J Pavan,[...]. PLoS Genet 2017
42
24

Gene-regulatory interactions in neural crest evolution and development.
Daniel Meulemans, Marianne Bronner-Fraser. Dev Cell 2004
328
21

Evolution of the new head by gradual acquisition of neural crest regulatory circuits.
Megan L Martik, Shashank Gandhi, Benjamin R Uy, J Andrew Gillis, Stephen A Green, Marcos Simoes-Costa, Marianne E Bronner. Nature 2019
41
21

Epigenomic annotation of enhancers predicts transcriptional regulators of human neural crest.
Alvaro Rada-Iglesias, Ruchi Bajpai, Sara Prescott, Samantha A Brugmann, Tomek Swigut, Joanna Wysocka. Cell Stem Cell 2012
198
21

Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities.
Sven Heinz, Christopher Benner, Nathanael Spann, Eric Bertolino, Yin C Lin, Peter Laslo, Jason X Cheng, Cornelis Murre, Harinder Singh, Christopher K Glass. Mol Cell 2010
21

Functional analysis of chicken Sox2 enhancers highlights an array of diverse regulatory elements that are conserved in mammals.
Masanori Uchikawa, Yoshiko Ishida, Tatsuya Takemoto, Yusuke Kamachi, Hisato Kondoh. Dev Cell 2003
286
18

deepTools2: a next generation web server for deep-sequencing data analysis.
Fidel Ramírez, Devon P Ryan, Björn Grüning, Vivek Bhardwaj, Fabian Kilpert, Andreas S Richter, Steffen Heyne, Friederike Dündar, Thomas Manke. Nucleic Acids Res 2016
18



Identification of a neural crest stem cell niche by Spatial Genomic Analysis.
Antti Lignell, Laura Kerosuo, Sebastian J Streichan, Long Cai, Marianne E Bronner. Nat Commun 2017
57
18

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
18

Msx1 and Pax3 cooperate to mediate FGF8 and WNT signals during Xenopus neural crest induction.
Anne-Hélène Monsoro-Burq, Estee Wang, Richard Harland. Dev Cell 2005
246
18

Transcriptome analysis reveals novel players in the cranial neural crest gene regulatory network.
Marcos Simões-Costa, Joanne Tan-Cabugao, Igor Antoshechkin, Tatjana Sauka-Spengler, Marianne E Bronner. Genome Res 2014
82
18

The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution.
James A Briggs, Caleb Weinreb, Daniel E Wagner, Sean Megason, Leonid Peshkin, Marc W Kirschner, Allon M Klein. Science 2018
264
18


A genome-wide assessment of the ancestral neural crest gene regulatory network.
Dorit Hockman, Vanessa Chong-Morrison, Stephen A Green, Daria Gavriouchkina, Ivan Candido-Ferreira, Irving T C Ling, Ruth M Williams, Chris T Amemiya, Jeramiah J Smith, Marianne E Bronner,[...]. Nat Commun 2019
31
19

FGF Modulates the Axial Identity of Trunk hPSC-Derived Neural Crest but Not the Cranial-Trunk Decision.
James O S Hackland, Patrick B Shelar, Nabjot Sandhu, Maneeshi S Prasad, Rebekah M Charney, Gustavo A Gomez, Thomas J R Frith, Martín I García-Castro. Stem Cell Reports 2019
26
23


Premigratory and migratory neural crest cells are multipotent in vivo.
Arianna Baggiolini, Sandra Varum, José María Mateos, Damiano Bettosini, Nessy John, Mario Bonalli, Urs Ziegler, Leda Dimou, Hans Clevers, Reinhard Furrer,[...]. Cell Stem Cell 2015
128
16

Model-based analysis of ChIP-Seq (MACS).
Yong Zhang, Tao Liu, Clifford A Meyer, Jérôme Eeckhoute, David S Johnson, Bradley E Bernstein, Chad Nusbaum, Richard M Myers, Myles Brown, Wei Li,[...]. Genome Biol 2008
16

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position.
Jason D Buenrostro, Paul G Giresi, Lisa C Zaba, Howard Y Chang, William J Greenleaf. Nat Methods 2013
16

Assembling neural crest regulatory circuits into a gene regulatory network.
Paola Betancur, Marianne Bronner-Fraser, Tatjana Sauka-Spengler. Annu Rev Cell Dev Biol 2010
212
16

Initiation of neural induction by FGF signalling before gastrulation.
A Streit, A J Berliner, C Papanayotou, A Sirulnik, C D Stern. Nature 2000
369
16


Network architecture and regulatory logic in neural crest development.
Austin S Hovland, Megan Rothstein, Marcos Simoes-Costa. Wiley Interdiscip Rev Syst Biol Med 2020
17
35

Metabolic Reprogramming Promotes Neural Crest Migration via Yap/Tead Signaling.
Debadrita Bhattacharya, Ana Paula Azambuja, Marcos Simoes-Costa. Dev Cell 2020
44
16

Transcription factor AP-2 essential for cranial closure and craniofacial development.
H Schorle, P Meier, M Buchert, R Jaenisch, P J Mitchell. Nature 1996
494
16

clusterProfiler: an R package for comparing biological themes among gene clusters.
Guangchuang Yu, Li-Gen Wang, Yanyan Han, Qing-Yu He. OMICS 2012
13


Ancient evolutionary origin of the neural crest gene regulatory network.
Tatjana Sauka-Spengler, Daniel Meulemans, Matthew Jones, Marianne Bronner-Fraser. Dev Cell 2007
179
13

The transcriptional control of trunk neural crest induction, survival, and delamination.
Martin Cheung, Marie-Christine Chaboissier, Anita Mynett, Elizabeth Hirst, Andreas Schedl, James Briscoe. Dev Cell 2005
305
13

Comprehensive spatiotemporal analysis of early chick neural crest network genes.
Jane Khudyakov, Marianne Bronner-Fraser. Dev Dyn 2009
83
13


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.