A citation-based method for searching scientific literature

Allison H Seiden, Felix Richter, Nihir Patel, Oscar L Rodriguez, Gintaras Deikus, Hardik Shah, Melissa Smith, Amy Roberts, Eileen C King, Robert P Sebra, Andrew J Sharp, Bruce D Gelb. Hum Mutat 2020
Times Cited: 1







List of co-cited articles
articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


GATA-dependent regulatory switches establish atrioventricular canal specificity during heart development.
Sonia Stefanovic, Phil Barnett, Karel van Duijvenboden, David Weber, Manfred Gessler, Vincent M Christoffels. Nat Commun 2014
59
100

Pooled association tests for rare variants in exon-resequencing studies.
Alkes L Price, Gregory V Kryukov, Paul I W de Bakker, Shaun M Purcell, Jeff Staples, Lee-Jen Wei, Shamil R Sunyaev. Am J Hum Genet 2010
554
100

Directed cardiomyocyte differentiation from human pluripotent stem cells by modulating Wnt/β-catenin signaling under fully defined conditions.
Xiaojun Lian, Jianhua Zhang, Samira M Azarin, Kexian Zhu, Laurie B Hazeltine, Xiaoping Bao, Cheston Hsiao, Timothy J Kamp, Sean P Palecek. Nat Protoc 2013
773
100

Integrative analysis of 111 reference human epigenomes.
Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi-Moussavi, Pouya Kheradpour, Zhizhuo Zhang, Jianrong Wang, Michael J Ziller,[...]. Nature 2015
100

Tissue-specific SMARCA4 binding at active and repressed regulatory elements during embryogenesis.
Catia Attanasio, Alex S Nord, Yiwen Zhu, Matthew J Blow, Simon C Biddie, Eric M Mendenhall, Jesse Dixon, Crystal Wright, Roya Hosseini, Jennifer A Akiyama,[...]. Genome Res 2014
42
100

Large-scale discovery of enhancers from human heart tissue.
Dalit May, Matthew J Blow, Tommy Kaplan, David J McCulley, Brian C Jensen, Jennifer A Akiyama, Amy Holt, Ingrid Plajzer-Frick, Malak Shoukry, Crystal Wright,[...]. Nat Genet 2011
184
100


Cistrome Data Browser: a data portal for ChIP-Seq and chromatin accessibility data in human and mouse.
Shenglin Mei, Qian Qin, Qiu Wu, Hanfei Sun, Rongbin Zheng, Chongzhi Zang, Muyuan Zhu, Jiaxin Wu, Xiaohui Shi, Len Taing,[...]. Nucleic Acids Res 2017
210
100

MITF interacts with the SWI/SNF subunit, BRG1, to promote GATA4 expression in cardiac hypertrophy.
Gaurav Mehta, Sivarajan Kumarasamy, Jian Wu, Aaron Walsh, Lijun Liu, Kandace Williams, Bina Joe, Ivana L de la Serna. J Mol Cell Cardiol 2015
28
100

High Rate of Recurrent De Novo Mutations in Developmental and Epileptic Encephalopathies.
Fadi F Hamdan, Candace T Myers, Patrick Cossette, Philippe Lemay, Dan Spiegelman, Alexandre Dionne Laporte, Christina Nassif, Ousmane Diallo, Jean Monlong, Maxime Cadieux-Dion,[...]. Am J Hum Genet 2017
185
100

Selene: a PyTorch-based deep learning library for sequence data.
Kathleen M Chen, Evan M Cofer, Jian Zhou, Olga G Troyanskaya. Nat Methods 2019
26
100


KLF15 Establishes the Landscape of Diurnal Expression in the Heart.
Lilei Zhang, Domenick A Prosdocimo, Xiaodong Bai, Chen Fu, Rongli Zhang, Frank Campbell, Xudong Liao, Jeff Coller, Mukesh K Jain. Cell Rep 2015
45
100


A general framework for estimating the relative pathogenicity of human genetic variants.
Martin Kircher, Daniela M Witten, Preti Jain, Brian J O'Roak, Gregory M Cooper, Jay Shendure. Nat Genet 2014
100

Massively parallel reporter assays in cultured mammalian cells.
Alexandre Melnikov, Xiaolan Zhang, Peter Rogov, Li Wang, Tarjei S Mikkelsen. J Vis Exp 2014
26
100

[Rupture of the heart in purulent myocarditis in an infant].
D Z Krasil'schchik, T I Kobzar'. Sud Med Ekspert 1968
4
100


De novo mutations in congenital heart disease with neurodevelopmental and other congenital anomalies.
Jason Homsy, Samir Zaidi, Yufeng Shen, James S Ware, Kaitlin E Samocha, Konrad J Karczewski, Steven R DePalma, David McKean, Hiroko Wakimoto, Josh Gorham,[...]. Science 2015
362
100

Dynamic GATA4 enhancers shape the chromatin landscape central to heart development and disease.
Aibin He, Fei Gu, Yong Hu, Qing Ma, Lillian Yi Ye, Jennifer A Akiyama, Axel Visel, Len A Pennacchio, William T Pu. Nat Commun 2014
93
100

Rapid and pervasive changes in genome-wide enhancer usage during mammalian development.
Alex S Nord, Matthew J Blow, Catia Attanasio, Jennifer A Akiyama, Amy Holt, Roya Hosseini, Sengthavy Phouanenavong, Ingrid Plajzer-Frick, Malak Shoukry, Veena Afzal,[...]. Cell 2013
219
100

Whole-genome analysis for effective clinical diagnosis and gene discovery in early infantile epileptic encephalopathy.
Betsy E P Ostrander, Russell J Butterfield, Brent S Pedersen, Andrew J Farrell, Ryan M Layer, Alistair Ward, Chase Miller, Tonya DiSera, Francis M Filloux, Meghan S Candee,[...]. NPJ Genom Med 2018
36
100

Accumulation of the inner nuclear envelope protein Sun1 is pathogenic in progeric and dystrophic laminopathies.
Chia-Yen Chen, Ya-Hui Chi, Rafidah Abdul Mutalif, Matthew F Starost, Timothy G Myers, Stasia A Anderson, Colin L Stewart, Kuan-Teh Jeang. Cell 2012
145
100


Transcription factor MITF regulates cardiac growth and hypertrophy.
Sagi Tshori, Dan Gilon, Ronen Beeri, Hovav Nechushtan, Dmitry Kaluzhny, Eli Pikarsky, Ehud Razin. J Clin Invest 2006
50
100

Dual transcriptional activator and repressor roles of TBX20 regulate adult cardiac structure and function.
Noboru J Sakabe, Ivy Aneas, Tao Shen, Leila Shokri, Soo-Young Park, Martha L Bulyk, Sylvia M Evans, Marcelo A Nobrega. Hum Mol Genet 2012
47
100

Congenital diseases and semaphorin signaling: overview to date of the evidence linking them.
Tomoyuki Masuda, Masahiko Taniguchi. Congenit Anom (Kyoto) 2015
9
100

The human genome browser at UCSC.
W James Kent, Charles W Sugnet, Terrence S Furey, Krishna M Roskin, Tom H Pringle, Alan M Zahler, David Haussler. Genome Res 2002
100

Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities.
Sven Heinz, Christopher Benner, Nathanael Spann, Eric Bertolino, Yin C Lin, Peter Laslo, Jason X Cheng, Cornelis Murre, Harinder Singh, Christopher K Glass. Mol Cell 2010
100

A framework for variation discovery and genotyping using next-generation DNA sequencing data.
Mark A DePristo, Eric Banks, Ryan Poplin, Kiran V Garimella, Jared R Maguire, Christopher Hartl, Anthony A Philippakis, Guillermo del Angel, Manuel A Rivas, Matt Hanna,[...]. Nat Genet 2011
100

[Somatic polysaccharide-containing antigens of the plague bacterium].
E E Bakhrakh, V I Veĭnblat. Zh Mikrobiol Epidemiol Immunobiol 1972
62
100

Parental influence on human germline de novo mutations in 1,548 trios from Iceland.
Hákon Jónsson, Patrick Sulem, Birte Kehr, Snaedis Kristmundsdottir, Florian Zink, Eirikur Hjartarson, Marteinn T Hardarson, Kristjan E Hjorleifsson, Hannes P Eggertsson, Sigurjon Axel Gudjonsson,[...]. Nature 2017
151
100

Genome-wide compendium and functional assessment of in vivo heart enhancers.
Diane E Dickel, Iros Barozzi, Yiwen Zhu, Yoko Fukuda-Yuzawa, Marco Osterwalder, Brandon J Mannion, Dalit May, Cailyn H Spurrell, Ingrid Plajzer-Frick, Catherine S Pickle,[...]. Nat Commun 2016
50
100

A hypomorphic lsd1 allele results in heart development defects in mice.
Thomas B Nicholson, Anup K Singh, Hui Su, Sarah Hevi, Jing Wang, Jeff Bajko, Mei Li, Reginald Valdez, Margaret Goetschkes, Paola Capodieci,[...]. PLoS One 2013
13
100

Optimized detection of insertions/deletions (INDELs) in whole-exome sequencing data.
Bo-Young Kim, Jung Hoon Park, Hye-Yeong Jo, Soo Kyung Koo, Mi-Hyun Park. PLoS One 2017
14
100


Genomic Patterns of De Novo Mutation in Simplex Autism.
Tychele N Turner, Bradley P Coe, Diane E Dickel, Kendra Hoekzema, Bradley J Nelson, Michael C Zody, Zev N Kronenberg, Fereydoun Hormozdiari, Archana Raja, Len A Pennacchio,[...]. Cell 2017
147
100

E-C coupling structural protein junctophilin-2 encodes a stress-adaptive transcription regulator.
Ang Guo, Yihui Wang, Biyi Chen, Yunhao Wang, Jinxiang Yuan, Liyang Zhang, Duane Hall, Jennifer Wu, Yun Shi, Qi Zhu,[...]. Science 2018
41
100

Fast computation and applications of genome mappability.
Thomas Derrien, Jordi Estellé, Santiago Marco Sola, David G Knowles, Emanuele Raineri, Roderic Guigó, Paolo Ribeca. PLoS One 2012
282
100



BET bromodomains mediate transcriptional pause release in heart failure.
Priti Anand, Jonathan D Brown, Charles Y Lin, Jun Qi, Rongli Zhang, Pedro Calderon Artero, M Amer Alaiti, Jace Bullard, Kareem Alazem, Kenneth B Margulies,[...]. Cell 2013
229
100

Temporal and spatial expression of collagens during murine atrioventricular heart valve development and maintenance.
Jacqueline D Peacock, Yinhui Lu, Manuel Koch, Karl E Kadler, Joy Lincoln. Dev Dyn 2008
44
100


Genetic variation in T-box binding element functionally affects SCN5A/SCN10A enhancer.
Malou van den Boogaard, L Y Elaine Wong, Federico Tessadori, Martijn L Bakker, Lisa K Dreizehnter, Vincent Wakker, Connie R Bezzina, Peter A C 't Hoen, Jeroen Bakkers, Phil Barnett,[...]. J Clin Invest 2012
131
100

ChIP-Seq identification of weakly conserved heart enhancers.
Matthew J Blow, David J McCulley, Zirong Li, Tao Zhang, Jennifer A Akiyama, Amy Holt, Ingrid Plajzer-Frick, Malak Shoukry, Crystal Wright, Feng Chen,[...]. Nat Genet 2010
325
100

Differentiation and Contractile Analysis of GFP-Sarcomere Reporter hiPSC-Cardiomyocytes.
Arun Sharma, Christopher N Toepfer, Manuel Schmid, Amanda C Garfinkel, Christine E Seidman. Curr Protoc Hum Genet 2018
16
100

De novo mutations in histone-modifying genes in congenital heart disease.
Samir Zaidi, Murim Choi, Hiroko Wakimoto, Lijiang Ma, Jianming Jiang, John D Overton, Angela Romano-Adesman, Robert D Bjornson, Roger E Breitbart, Kerry K Brown,[...]. Nature 2013
532
100


A comparative encyclopedia of DNA elements in the mouse genome.
Feng Yue, Yong Cheng, Alessandra Breschi, Jeff Vierstra, Weisheng Wu, Tyrone Ryba, Richard Sandstrom, Zhihai Ma, Carrie Davis, Benjamin D Pope,[...]. Nature 2014
877
100


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.