A citation-based method for searching scientific literature

Aparna Bhaduri, Elizabeth Di Lullo, Diane Jung, Sören Müller, Elizabeth Erin Crouch, Carmen Sandoval Espinosa, Tomoko Ozawa, Beatriz Alvarado, Julien Spatazza, Cathryn René Cadwell, Grace Wilkins, Dmitry Velmeshev, Siyuan John Liu, Martina Malatesta, Madeline Gail Andrews, Mohammed Andres Mostajo-Radji, Eric Jinsheng Huang, Tomasz Jan Nowakowski, Daniel Amos Lim, Aaron Diaz, David Ronan Raleigh, Arnold Richard Kriegstein. Cell Stem Cell 2020
Times Cited: 82







List of co-cited articles
826 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


An Integrative Model of Cellular States, Plasticity, and Genetics for Glioblastoma.
Cyril Neftel, Julie Laffy, Mariella G Filbin, Toshiro Hara, Marni E Shore, Gilbert J Rahme, Alyssa R Richman, Dana Silverbush, McKenzie L Shaw, Christine M Hebert,[...]. Cell 2019
482
48

Single-cell RNA-seq highlights intratumoral heterogeneity in primary glioblastoma.
Anoop P Patel, Itay Tirosh, John J Trombetta, Alex K Shalek, Shawn M Gillespie, Hiroaki Wakimoto, Daniel P Cahill, Brian V Nahed, William T Curry, Robert L Martuza,[...]. Science 2014
36

Integrated genomic analysis identifies clinically relevant subtypes of glioblastoma characterized by abnormalities in PDGFRA, IDH1, EGFR, and NF1.
Roel G W Verhaak, Katherine A Hoadley, Elizabeth Purdom, Victoria Wang, Yuan Qi, Matthew D Wilkerson, C Ryan Miller, Li Ding, Todd Golub, Jill P Mesirov,[...]. Cancer Cell 2010
35

A Patient-Derived Glioblastoma Organoid Model and Biobank Recapitulates Inter- and Intra-tumoral Heterogeneity.
Fadi Jacob, Ryan D Salinas, Daniel Y Zhang, Phuong T T Nguyen, Jordan G Schnoll, Samuel Zheng Hao Wong, Radhika Thokala, Saad Sheikh, Deeksha Saxena, Stefan Prokop,[...]. Cell 2020
215
31

Identification of human brain tumour initiating cells.
Sheila K Singh, Cynthia Hawkins, Ian D Clarke, Jeremy A Squire, Jane Bayani, Takuichiro Hide, R Mark Henkelman, Michael D Cusimano, Peter B Dirks. Nature 2004
28

Modeling Patient-Derived Glioblastoma with Cerebral Organoids.
Amanda Linkous, Demosthenes Balamatsias, Matija Snuderl, Lincoln Edwards, Ken Miyaguchi, Teresa Milner, Batsheva Reich, Leona Cohen-Gould, Andrew Storaska, Yasumi Nakayama,[...]. Cell Rep 2019
166
26

Single-cell RNA-seq supports a developmental hierarchy in human oligodendroglioma.
Itay Tirosh, Andrew S Venteicher, Christine Hebert, Leah E Escalante, Anoop P Patel, Keren Yizhak, Jonathan M Fisher, Christopher Rodman, Christopher Mount, Mariella G Filbin,[...]. Nature 2016
457
25

Tumor Evolution of Glioma-Intrinsic Gene Expression Subtypes Associates with Immunological Changes in the Microenvironment.
Qianghu Wang, Baoli Hu, Xin Hu, Hoon Kim, Massimo Squatrito, Lisa Scarpace, Ana C deCarvalho, Sali Lyu, Pengping Li, Yan Li,[...]. Cancer Cell 2017
640
24

The somatic genomic landscape of glioblastoma.
Cameron W Brennan, Roel G W Verhaak, Aaron McKenna, Benito Campos, Houtan Noushmehr, Sofie R Salama, Siyuan Zheng, Debyani Chakravarty, J Zachary Sanborn, Samuel H Berman,[...]. Cell 2013
23

Glioblastoma Model Using Human Cerebral Organoids.
Junko Ogawa, Gerald M Pao, Maxim N Shokhirev, Inder M Verma. Cell Rep 2018
158
20

Glioma stem cells promote radioresistance by preferential activation of the DNA damage response.
Shideng Bao, Qiulian Wu, Roger E McLendon, Yueling Hao, Qing Shi, Anita B Hjelmeland, Mark W Dewhirst, Darell D Bigner, Jeremy N Rich. Nature 2006
19

The 2016 World Health Organization Classification of Tumors of the Central Nervous System: a summary.
David N Louis, Arie Perry, Guido Reifenberger, Andreas von Deimling, Dominique Figarella-Branger, Webster K Cavenee, Hiroko Ohgaki, Otmar D Wiestler, Paul Kleihues, David W Ellison. Acta Neuropathol 2016
19

The Phenotypes of Proliferating Glioblastoma Cells Reside on a Single Axis of Variation.
Lin Wang, Husam Babikir, Sören Müller, Garima Yagnik, Karin Shamardani, Francisca Catalan, Gary Kohanbash, Beatriz Alvarado, Elizabeth Di Lullo, Arnold Kriegstein,[...]. Cancer Discov 2019
80
18

Decoupling genetics, lineages, and microenvironment in IDH-mutant gliomas by single-cell RNA-seq.
Andrew S Venteicher, Itay Tirosh, Christine Hebert, Keren Yizhak, Cyril Neftel, Mariella G Filbin, Volker Hovestadt, Leah E Escalante, McKenzie L Shaw, Christopher Rodman,[...]. Science 2017
373
18

A Three-Dimensional Organoid Culture System Derived from Human Glioblastomas Recapitulates the Hypoxic Gradients and Cancer Stem Cell Heterogeneity of Tumors Found In Vivo.
Christopher G Hubert, Maricruz Rivera, Lisa C Spangler, Qiulian Wu, Stephen C Mack, Briana C Prager, Marta Couce, Roger E McLendon, Andrew E Sloan, Jeremy N Rich. Cancer Res 2016
266
17

Cancer stem cells in glioblastoma.
Justin D Lathia, Stephen C Mack, Erin E Mulkearns-Hubert, Claudia L L Valentim, Jeremy N Rich. Genes Dev 2015
793
17

Fate mapping of human glioblastoma reveals an invariant stem cell hierarchy.
Xiaoyang Lan, David J Jörg, Florence M G Cavalli, Laura M Richards, Long V Nguyen, Robert J Vanner, Paul Guilhamon, Lilian Lee, Michelle M Kushida, Davide Pellacani,[...]. Nature 2017
171
17

Cerebral organoids model human brain development and microcephaly.
Madeline A Lancaster, Magdalena Renner, Carol-Anne Martin, Daniel Wenzel, Louise S Bicknell, Matthew E Hurles, Tessa Homfray, Josef M Penninger, Andrew P Jackson, Juergen A Knoblich. Nature 2013
17

Reconstructing and reprogramming the tumor-propagating potential of glioblastoma stem-like cells.
Mario L Suvà, Esther Rheinbay, Shawn M Gillespie, Anoop P Patel, Hiroaki Wakimoto, Samuel D Rabkin, Nicolo Riggi, Andrew S Chi, Daniel P Cahill, Brian V Nahed,[...]. Cell 2014
507
15

Genetically engineered cerebral organoids model brain tumor formation.
Shan Bian, Marko Repic, Zhenming Guo, Anoop Kavirayani, Thomas Burkard, Joshua A Bagley, Christian Krauditsch, Jürgen A Knoblich. Nat Methods 2018
150
15

Radiotherapy plus concomitant and adjuvant temozolomide for glioblastoma.
Roger Stupp, Warren P Mason, Martin J van den Bent, Michael Weller, Barbara Fisher, Martin J B Taphoorn, Karl Belanger, Alba A Brandes, Christine Marosi, Ulrich Bogdahn,[...]. N Engl J Med 2005
15


A restricted cell population propagates glioblastoma growth after chemotherapy.
Jian Chen, Yanjiao Li, Tzong-Shiue Yu, Renée M McKay, Dennis K Burns, Steven G Kernie, Luis F Parada. Nature 2012
14

Glioblastoma stem cells: lessons from the tumor hierarchy in a lethal cancer.
Ryan C Gimple, Shruti Bhargava, Deobrat Dixit, Jeremy N Rich. Genes Dev 2019
119
14

Human glioblastoma arises from subventricular zone cells with low-level driver mutations.
Joo Ho Lee, Jeong Eun Lee, Jee Ye Kahng, Se Hoon Kim, Jun Sung Park, Seon Jin Yoon, Ji-Yong Um, Woo Kyeong Kim, June-Koo Lee, Junseong Park,[...]. Nature 2018
232
14

Molecular identity of human outer radial glia during cortical development.
Alex A Pollen, Tomasz J Nowakowski, Jiadong Chen, Hanna Retallack, Carmen Sandoval-Espinosa, Cory R Nicholas, Joe Shuga, Siyuan John Liu, Michael C Oldham, Aaron Diaz,[...]. Cell 2015
408
14

Single-Cell RNA-Seq Analysis of Infiltrating Neoplastic Cells at the Migrating Front of Human Glioblastoma.
Spyros Darmanis, Steven A Sloan, Derek Croote, Marco Mignardi, Sophia Chernikova, Peyman Samghababi, Ye Zhang, Norma Neff, Mark Kowarsky, Christine Caneda,[...]. Cell Rep 2017
325
13

Developmental and oncogenic programs in H3K27M gliomas dissected by single-cell RNA-seq.
Mariella G Filbin, Itay Tirosh, Volker Hovestadt, McKenzie L Shaw, Leah E Escalante, Nathan D Mathewson, Cyril Neftel, Nelli Frank, Kristine Pelton, Christine M Hebert,[...]. Science 2018
217
13

Identification of a cancer stem cell in human brain tumors.
Sheila K Singh, Ian D Clarke, Mizuhiko Terasaki, Victoria E Bonn, Cynthia Hawkins, Jeremy Squire, Peter B Dirks. Cancer Res 2003
13

Brain-Region-Specific Organoids Using Mini-bioreactors for Modeling ZIKV Exposure.
Xuyu Qian, Ha Nam Nguyen, Mingxi M Song, Christopher Hadiono, Sarah C Ogden, Christy Hammack, Bing Yao, Gregory R Hamersky, Fadi Jacob, Chun Zhong,[...]. Cell 2016
12

Individual brain organoids reproducibly form cell diversity of the human cerebral cortex.
Silvia Velasco, Amanda J Kedaigle, Sean K Simmons, Allison Nash, Marina Rocha, Giorgia Quadrato, Bruna Paulsen, Lan Nguyen, Xian Adiconis, Aviv Regev,[...]. Nature 2019
298
12

Comprehensive Integration of Single-Cell Data.
Tim Stuart, Andrew Butler, Paul Hoffman, Christoph Hafemeister, Efthymia Papalexi, William M Mauck, Yuhan Hao, Marlon Stoeckius, Peter Smibert, Rahul Satija. Cell 2019
12

Single-cell RNA-seq reveals that glioblastoma recapitulates a normal neurodevelopmental hierarchy.
Charles P Couturier, Shamini Ayyadhury, Phuong U Le, Javad Nadaf, Jean Monlong, Gabriele Riva, Redouane Allache, Salma Baig, Xiaohua Yan, Mathieu Bourgey,[...]. Nat Commun 2020
85
12

Single-Cell Transcriptomics Uncovers Glial Progenitor Diversity and Cell Fate Determinants during Development and Gliomagenesis.
Qinjie Weng, Jincheng Wang, Jiajia Wang, Danyang He, Zuolin Cheng, Feng Zhang, Ravinder Verma, Lingli Xu, Xinran Dong, Yunfei Liao,[...]. Cell Stem Cell 2019
63
14

Dimensionality reduction for visualizing single-cell data using UMAP.
Etienne Becht, Leland McInnes, John Healy, Charles-Antoine Dutertre, Immanuel W H Kwok, Lai Guan Ng, Florent Ginhoux, Evan W Newell. Nat Biotechnol 2018
10

RNA velocity of single cells.
Gioele La Manno, Ruslan Soldatov, Amit Zeisel, Emelie Braun, Hannah Hochgerner, Viktor Petukhov, Katja Lidschreiber, Maria E Kastriti, Peter Lönnerberg, Alessandro Furlan,[...]. Nature 2018
883
10

Tumor stem cells derived from glioblastomas cultured in bFGF and EGF more closely mirror the phenotype and genotype of primary tumors than do serum-cultured cell lines.
Jeongwu Lee, Svetlana Kotliarova, Yuri Kotliarov, Aiguo Li, Qin Su, Nicholas M Donin, Sandra Pastorino, Benjamin W Purow, Neil Christopher, Wei Zhang,[...]. Cancer Cell 2006
10

Isolation and characterization of tumorigenic, stem-like neural precursors from human glioblastoma.
Rossella Galli, Elena Binda, Ugo Orfanelli, Barbara Cipelletti, Angela Gritti, Simona De Vitis, Roberta Fiocco, Chiara Foroni, Francesco Dimeco, Angelo Vescovi. Cancer Res 2004
10

Guided self-organization and cortical plate formation in human brain organoids.
Madeline A Lancaster, Nina S Corsini, Simone Wolfinger, E Hilary Gustafson, Alex W Phillips, Thomas R Burkard, Tomoki Otani, Frederick J Livesey, Juergen A Knoblich. Nat Biotechnol 2017
313
10

Self-organization of axial polarity, inside-out layer pattern, and species-specific progenitor dynamics in human ES cell-derived neocortex.
Taisuke Kadoshima, Hideya Sakaguchi, Tokushige Nakano, Mika Soen, Satoshi Ando, Mototsugu Eiraku, Yoshiki Sasai. Proc Natl Acad Sci U S A 2013
469
10

An in vivo model of functional and vascularized human brain organoids.
Abed AlFatah Mansour, J Tiago Gonçalves, Cooper W Bloyd, Hao Li, Sarah Fernandes, Daphne Quang, Stephen Johnston, Sarah L Parylak, Xin Jin, Fred H Gage. Nat Biotechnol 2018
413
10

Electrical and synaptic integration of glioma into neural circuits.
Humsa S Venkatesh, Wade Morishita, Anna C Geraghty, Dana Silverbush, Shawn M Gillespie, Marlene Arzt, Lydia T Tam, Cedric Espenel, Anitha Ponnuswami, Lijun Ni,[...]. Nature 2019
275
10

Stem cell-associated heterogeneity in Glioblastoma results from intrinsic tumor plasticity shaped by the microenvironment.
Anne Dirkse, Anna Golebiewska, Thomas Buder, Petr V Nazarov, Arnaud Muller, Suresh Poovathingal, Nicolaas H C Brons, Sonia Leite, Nicolas Sauvageot, Dzjemma Sarkisjan,[...]. Nat Commun 2019
180
10

Tumor Microenvironment Is Critical for the Maintenance of Cellular States Found in Primary Glioblastomas.
Allison R Pine, Stefano M Cirigliano, James G Nicholson, Yang Hu, Amanda Linkous, Ken Miyaguchi, Lincoln Edwards, Richa Singhania, Theodore H Schwartz, Rohan Ramakrishna,[...]. Cancer Discov 2020
46
19

DNA methylation-based classification of central nervous system tumours.
David Capper, David T W Jones, Martin Sill, Volker Hovestadt, Daniel Schrimpf, Dominik Sturm, Christian Koelsche, Felix Sahm, Lukas Chavez, David E Reuss,[...]. Nature 2018
945
9

Bone morphogenetic proteins inhibit the tumorigenic potential of human brain tumour-initiating cells.
S G M Piccirillo, B A Reynolds, N Zanetti, G Lamorte, E Binda, G Broggi, H Brem, A Olivi, F Dimeco, A L Vescovi. Nature 2006
871
9

Effects of radiotherapy with concomitant and adjuvant temozolomide versus radiotherapy alone on survival in glioblastoma in a randomised phase III study: 5-year analysis of the EORTC-NCIC trial.
Roger Stupp, Monika E Hegi, Warren P Mason, Martin J van den Bent, Martin J B Taphoorn, Robert C Janzer, Samuel K Ludwin, Anouk Allgeier, Barbara Fisher, Karl Belanger,[...]. Lancet Oncol 2009
9

Cell diversity and network dynamics in photosensitive human brain organoids.
Giorgia Quadrato, Tuan Nguyen, Evan Z Macosko, John L Sherwood, Sung Min Yang, Daniel R Berger, Natalie Maria, Jorg Scholvin, Melissa Goldman, Justin P Kinney,[...]. Nature 2017
521
9

Glioma stem cell lines expanded in adherent culture have tumor-specific phenotypes and are suitable for chemical and genetic screens.
Steven M Pollard, Koichi Yoshikawa, Ian D Clarke, Davide Danovi, Stefan Stricker, Roslin Russell, Jane Bayani, Renee Head, Marco Lee, Mark Bernstein,[...]. Cell Stem Cell 2009
672
9

Self-organization of polarized cerebellar tissue in 3D culture of human pluripotent stem cells.
Keiko Muguruma, Ayaka Nishiyama, Hideshi Kawakami, Kouichi Hashimoto, Yoshiki Sasai. Cell Rep 2015
296
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.