A citation-based method for searching scientific literature

Zi-Fu Wang, Ming-Hao Li, I-Te Chu, Fernaldo R Winnerdy, Anh T Phan, Ta-Chau Chang. Nucleic Acids Res 2020
Times Cited: 2







List of co-cited articles
3 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
100

Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
100


Effect of loop sequence and size on DNA aptamer stability.
I Smirnov, R H Shafer. Biochemistry 2000
222
50

Loop-length-dependent folding of G-quadruplexes.
Pascale Hazel, Julian Huppert, Shankar Balasubramanian, Stephen Neidle. J Am Chem Soc 2004
339
50

Fluorescent probe for visualizing guanine-quadruplex DNA by fluorescence lifetime imaging microscopy.
Ting-Yuan Tseng, Cheng-Hao Chien, Jen-Fei Chu, Wei-Chun Huang, Mei-Ying Lin, Cheng-Chung Chang, Ta-Chau Chang. J Biomed Opt 2013
32
50

Structural Insights into the Quadruplex-Duplex 3' Interface Formed from a Telomeric Repeat: A Potential Molecular Target.
Irene Russo Krauss, Sneha Ramaswamy, Stephen Neidle, Shozeb Haider, Gary N Parkinson. J Am Chem Soc 2016
36
50

G-quadruplex DNA assemblies: loop length, cation identity, and multimer formation.
Nicolas Smargiasso, Frédéric Rosu, Wei Hsia, Pierre Colson, Erin Shammel Baker, Michael T Bowers, Edwin De Pauw, Valérie Gabelica. J Am Chem Soc 2008
186
50


High-throughput sequencing of DNA G-quadruplex structures in the human genome.
Vicki S Chambers, Giovanni Marsico, Jonathan M Boutell, Marco Di Antonio, Geoffrey P Smith, Shankar Balasubramanian. Nat Biotechnol 2015
537
50

A New G-Quadruplex with Hairpin Loop Immediately Upstream of the Human BCL2 P1 Promoter Modulates Transcription.
Buket Onel, Megan Carver, Guanhui Wu, Daria Timonina, Salil Kalarn, Marti Larriva, Danzhou Yang. J Am Chem Soc 2016
64
50

How long is too long? Effects of loop size on G-quadruplex stability.
Aurore Guédin, Julien Gros, Patrizia Alberti, Jean-Louis Mergny. Nucleic Acids Res 2010
256
50

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
50

A Mechanosensor Mechanism Controls the G-Quadruplex/i-Motif Molecular Switch in the MYC Promoter NHE III1.
Caleb Sutherland, Yunxi Cui, Hanbin Mao, Laurence H Hurley. J Am Chem Soc 2016
57
50


Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?
Shankar Balasubramanian, Laurence H Hurley, Stephen Neidle. Nat Rev Drug Discov 2011
50

G-quadruplex DNA: a target for drug design.
J L Mergny, C Hélène. Nat Med 1998
327
50

Conformational transition of a hairpin structure to G-quadruplex within the WNT1 gene promoter.
Margaret Hsin-Jui Kuo, Zi-Fu Wang, Ting-Yuan Tseng, Ming-Hao Li, Shang-Te Danny Hsu, Jing-Jer Lin, Ta-Chau Chang. J Am Chem Soc 2015
30
50

Structural basis of DNA quadruplex-duplex junction formation.
Kah Wai Lim, Anh Tuân Phan. Angew Chem Int Ed Engl 2013
73
50


Highly prevalent putative quadruplex sequence motifs in human DNA.
Alan K Todd, Matthew Johnston, Stephen Neidle. Nucleic Acids Res 2005
670
50

Direct evidence of mitochondrial G-quadruplex DNA by using fluorescent anti-cancer agents.
Wei-Chun Huang, Ting-Yuan Tseng, Ying-Ting Chen, Cheng-Chung Chang, Zi-Fu Wang, Chiung-Lin Wang, Tsu-Ning Hsu, Pei-Tzu Li, Chin-Tin Chen, Jing-Jer Lin,[...]. Nucleic Acids Res 2015
62
50


Short loop length and high thermal stability determine genomic instability induced by G-quadruplex-forming minisatellites.
Aurèle Piazza, Michael Adrian, Frédéric Samazan, Brahim Heddi, Florian Hamon, Alexandre Serero, Judith Lopes, Marie-Paule Teulade-Fichou, Anh Tuân Phan, Alain Nicolas. EMBO J 2015
83
50

Coexistence of two distinct G-quadruplex conformations in the hTERT promoter.
Kah Wai Lim, Laurent Lacroix, Doris Jia En Yue, Joefina Kim Cheow Lim, Jocelyn Mei Wen Lim, Anh Tuân Phan. J Am Chem Soc 2010
103
50

Genetic interactions of G-quadruplexes in humans.
Katherine G Zyner, Darcie S Mulhearn, Santosh Adhikari, Sergio Martínez Cuesta, Marco Di Antonio, Nicolas Erard, Gregory J Hannon, David Tannahill, Shankar Balasubramanian. Elife 2019
41
50

The G-quadruplex fluorescent probe 3,6-bis(1-methyl-2-vinyl-pyridinium) carbazole diiodide as a biosensor for human cancers.
Ting-Yuan Tseng, Wei-Wen Chen, I-Te Chu, Chiung-Lin Wang, Cheng-Chung Chang, Mei-Chun Lin, Pei-Jen Lou, Ta-Chau Chang. Sci Rep 2018
16
50


Sequence effects of single base loops in intramolecular quadruplex DNA.
Phillip A Rachwal, Tom Brown, Keith R Fox. FEBS Lett 2007
104
50

Intragenic G-quadruplex structure formed in the human CD133 and its biological and translational relevance.
Pasquale Zizza, Chiara Cingolani, Simona Artuso, Erica Salvati, Angela Rizzo, Carmen D'Angelo, Manuela Porru, Bruno Pagano, Jussara Amato, Antonio Randazzo,[...]. Nucleic Acids Res 2016
28
50

Structures of 1:1 and 2:1 complexes of BMVC and MYC promoter G-quadruplex reveal a mechanism of ligand conformation adjustment for G4-recognition.
Wenting Liu, Clement Lin, Guanhui Wu, Jixun Dai, Ta-Chau Chang, Danzhou Yang. Nucleic Acids Res 2019
14
50

"Nano-oddities": unusual nucleic acid assemblies for DNA-based nanostructures and nanodevices.
Liliya A Yatsunyk, Oscar Mendoza, Jean-Louis Mergny. Acc Chem Res 2014
86
50

Loop permutation affects the topology and stability of G-quadruplexes.
Mingpan Cheng, Yu Cheng, Jingya Hao, Guoqing Jia, Jun Zhou, Jean-Louis Mergny, Can Li. Nucleic Acids Res 2018
32
50

Intramolecular DNA quadruplexes with different arrangements of short and long loops.
Phillip A Rachwal, I Stuart Findlow, Joern M Werner, Tom Brown, Keith R Fox. Nucleic Acids Res 2007
124
50

Tetramolecular quadruplex stability and assembly.
Phong Lan Thao Tran, Anne De Cian, Julien Gros, Rui Moriyama, Jean-Louis Mergny. Top Curr Chem 2013
45
50

Visualization and selective chemical targeting of RNA G-quadruplex structures in the cytoplasm of human cells.
Giulia Biffi, Marco Di Antonio, David Tannahill, Shankar Balasubramanian. Nat Chem 2014
336
50

G-quadruplex formation by single-base mutation or deletion of mitochondrial DNA sequences.
I-Te Chu, Chia-Chuan Wu, Ta-Chau Chang. Biochim Biophys Acta Gen Subj 2019
5
50

Effect of loop sequence and loop length on the intrinsic fluorescence of G-quadruplexes.
Chun Kit Kwok, Madeline E Sherlock, Philip C Bevilacqua. Biochemistry 2013
36
50



Altering the Neisseria gonorrhoeae pilE Guanine Quadruplex Loop Bases Affects Pilin Antigenic Variation.
Lauren L Prister, Shaohui Yin, Laty A Cahoon, H Steven Seifert. Biochemistry 2020
4
50

A Double-Strand Break Does Not Promote Neisseria gonorrhoeae Pilin Antigenic Variation.
Lauren L Prister, Jing Xu, H Steven Seifert. J Bacteriol 2019
3
50

Regulation of telomere length by G-quadruplex telomere DNA- and TERRA-binding protein TLS/FUS.
Kentaro Takahama, Asami Takada, Shota Tada, Mai Shimizu, Kazutoshi Sayama, Riki Kurokawa, Takanori Oyoshi. Chem Biol 2013
94
50

FANCJ couples replication past natural fork barriers with maintenance of chromatin structure.
Rebekka A Schwab, Jadwiga Nieminuszczy, Kazuo Shin-ya, Wojciech Niedzwiedz. J Cell Biol 2013
74
50

G-quadruplexes regulate Epstein-Barr virus-encoded nuclear antigen 1 mRNA translation.
Pierre Murat, Jie Zhong, Lea Lekieffre, Nathan P Cowieson, Jennifer L Clancy, Thomas Preiss, Shankar Balasubramanian, Rajiv Khanna, Judy Tellam. Nat Chem Biol 2014
146
50



Putative DNA G-quadruplex formation within the promoters of Plasmodium falciparum var genes.
Nicolas Smargiasso, Valérie Gabelica, Christian Damblon, Frédéric Rosu, Edwin De Pauw, Marie-Paule Teulade-Fichou, J Alexandra Rowe, Antoine Claessens. BMC Genomics 2009
43
50

Transcription regulation of CDKN1A (p21/CIP1/WAF1) by TRF2 is epigenetically controlled through the REST repressor complex.
Tabish Hussain, Dhurjhoti Saha, Gunjan Purohit, Anirban Kar, Anand Kishore Mukherjee, Shalu Sharma, Suman Sengupta, Parashar Dhapola, Basudeb Maji, Sreekanth Vedagopuram,[...]. Sci Rep 2017
30
50



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.