A citation-based method for searching scientific literature

Pei Zhuang, Huanqing Zhang, Ryan M Welchko, Robert C Thompson, Shunbin Xu, David L Turner. Sci Rep 2020
Times Cited: 6







List of co-cited articles
11 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Programmable in situ amplification for multiplexed imaging of mRNA expression.
Harry M T Choi, Joann Y Chang, Le A Trinh, Jennifer E Padilla, Scott E Fraser, Niles A Pierce. Nat Biotechnol 2010
337
66


Triggered amplification by hybridization chain reaction.
Robert M Dirks, Niles A Pierce. Proc Natl Acad Sci U S A 2004
855
50


In situ detection and genotyping of individual mRNA molecules.
Chatarina Larsson, Ida Grundberg, Ola Söderberg, Mats Nilsson. Nat Methods 2010
225
33

Branched Hybridization Chain Reaction Circuit for Ultrasensitive Localizable Imaging of mRNA in Living Cells.
Lan Liu, Jin-Wen Liu, Han Wu, Xiang-Nan Wang, Ru-Qin Yu, Jian-Hui Jiang. Anal Chem 2018
45
33

High-fidelity amplified FISH for the detection and allelic discrimination of single mRNA molecules.
Salvatore A E Marras, Yuri Bushkin, Sanjay Tyagi. Proc Natl Acad Sci U S A 2019
16
33

Mapping a multiplexed zoo of mRNA expression.
Harry M T Choi, Colby R Calvert, Naeem Husain, David Huss, Julius C Barsi, Benjamin E Deverman, Ryan C Hunter, Mihoko Kato, S Melanie Lee, Anna C T Abelin,[...]. Development 2016
61
33

Third-generation in situ hybridization chain reaction: multiplexed, quantitative, sensitive, versatile, robust.
Harry M T Choi, Maayan Schwarzkopf, Mark E Fornace, Aneesh Acharya, Georgios Artavanis, Johannes Stegmaier, Alexandre Cunha, Niles A Pierce. Development 2018
162
33

Nanoscale imaging of RNA with expansion microscopy.
Fei Chen, Asmamaw T Wassie, Allison J Cote, Anubhav Sinha, Shahar Alon, Shoh Asano, Evan R Daugharthy, Jae-Byum Chang, Adam Marblestone, George M Church,[...]. Nat Methods 2016
143
33

Imaging individual mRNA molecules using multiple singly labeled probes.
Arjun Raj, Patrick van den Bogaard, Scott A Rifkin, Alexander van Oudenaarden, Sanjay Tyagi. Nat Methods 2008
33

Pup exposure facilitates retrieving behavior via the oxytocin neural system in female mice.
Shota Okabe, Yousuke Tsuneoka, Aki Takahashi, Rumi Ooyama, Akiyuki Watarai, Sayaka Maeda, Yuka Honda, Miho Nagasawa, Kazutaka Mogi, Katsuhiko Nishimori,[...]. Psychoneuroendocrinology 2017
23
16

Striatal dopamine 2 receptor upregulation during development predisposes to diet-induced obesity by reducing energy output in mice.
Marie A Labouesse, Andrea M Sartori, Oliver Weinmann, Eleanor H Simpson, Christoph Kellendonk, Ulrike Weber-Stadlbauer. Proc Natl Acad Sci U S A 2018
14
16

Developmental and spatial patterns of expression of the mouse homeobox gene, Hox 2.1.
R Krumlauf, P W Holland, J H McVey, B L Hogan. Development 1987
216
16

Novel amino linkers enabling efficient labeling and convenient purification of amino-modified oligonucleotides.
Yasuo Komatsu, Naoshi Kojima, Maiko Sugino, Akiko Mikami, Ken Nonaka, Yumi Fujinawa, Takashi Sugimoto, Kousuke Sato, Kenichi Matsubara, Eiko Ohtsuka. Bioorg Med Chem 2008
8
16

FACS-array profiling of striatal projection neuron subtypes in juvenile and adult mouse brains.
Mary Kay Lobo, Stanislav L Karsten, Michelle Gray, Daniel H Geschwind, X William Yang. Nat Neurosci 2006
294
16

Differential expression of orexin receptors 1 and 2 in the rat brain.
J N Marcus, C J Aschkenasi, C E Lee, R M Chemelli, C B Saper, M Yanagisawa, J K Elmquist. J Comp Neurol 2001
16


Technical review: In situ hybridization.
Ellen Jensen. Anat Rec (Hoboken) 2014
30
16



Neurotransmitters and neuropeptides in gonadal steroid receptor-expressing cells in medial preoptic area subregions of the male mouse.
Yousuke Tsuneoka, Sachine Yoshida, Kenkichi Takase, Satoko Oda, Masaru Kuroda, Hiromasa Funato. Sci Rep 2017
21
16

Functional, anatomical, and neurochemical differentiation of medial preoptic area subregions in relation to maternal behavior in the mouse.
Yousuke Tsuneoka, Teppo Maruyama, Sachine Yoshida, Katsuhiko Nishimori, Tadafumi Kato, Michael Numan, Kumi O Kuroda. J Comp Neurol 2013
87
16


A translational profiling approach for the molecular characterization of CNS cell types.
Myriam Heiman, Anne Schaefer, Shiaoching Gong, Jayms D Peterson, Michelle Day, Keri E Ramsey, Mayte Suárez-Fariñas, Cordelia Schwarz, Dietrich A Stephan, D James Surmeier,[...]. Cell 2008
706
16


Distinct preoptic-BST nuclei dissociate paternal and infanticidal behavior in mice.
Yousuke Tsuneoka, Kenichi Tokita, Chihiro Yoshihara, Taiju Amano, Gianluca Esposito, Arthur J Huang, Lily M Y Yu, Yuri Odaka, Kazutaka Shinozuka, Thomas J McHugh,[...]. EMBO J 2015
46
16

Molecular, spatial, and functional single-cell profiling of the hypothalamic preoptic region.
Jeffrey R Moffitt, Dhananjay Bambah-Mukku, Stephen W Eichhorn, Eric Vaughn, Karthik Shekhar, Julio D Perez, Nimrod D Rubinstein, Junjie Hao, Aviv Regev, Catherine Dulac,[...]. Science 2018
242
16

In situ DNA-hybridization chain reaction (HCR): a facilitated in situ HCR system for the detection of environmental microorganisms.
Tsuyoshi Yamaguchi, Shuji Kawakami, Masashi Hatamoto, Hiroyuki Imachi, Masanobu Takahashi, Nobuo Araki, Takashi Yamaguchi, Kengo Kubota. Environ Microbiol 2015
31
16

Small RNA Detection by in Situ Hybridization Methods.
Martyna O Urbanek, Anna U Nawrocka, Wlodzimierz J Krzyzosiak. Int J Mol Sci 2015
43
16

Dynamic control of positional information in the early Drosophila embryo.
Johannes Jaeger, Svetlana Surkova, Maxim Blagov, Hilde Janssens, David Kosman, Konstantin N Kozlov, Manu, Ekaterina Myasnikova, Carlos E Vanario-Alonso, Maria Samsonova,[...]. Nature 2004
357
16

Single-molecule RNA detection at depth by hybridization chain reaction and tissue hydrogel embedding and clearing.
Sheel Shah, Eric Lubeck, Maayan Schwarzkopf, Ting-Fang He, Alon Greenbaum, Chang Ho Sohn, Antti Lignell, Harry M T Choi, Viviana Gradinaru, Niles A Pierce,[...]. Development 2016
101
16


Stacking nonenzymatic circuits for high signal gain.
Xi Chen, Neima Briggs, Jeremy R McLain, Andrew D Ellington. Proc Natl Acad Sci U S A 2013
139
16

Simultaneous detection of RNA and protein by in situ hybridization and immunological staining.
H Nagaso, T Murata, N Day, K K Yokoyama. J Histochem Cytochem 2001
67
16


A computational framework to study sub-cellular RNA localization.
Aubin Samacoits, Racha Chouaib, Adham Safieddine, Abdel-Meneem Traboulsi, Wei Ouyang, Christophe Zimmer, Marion Peter, Edouard Bertrand, Thomas Walter, Florian Mueller. Nat Commun 2018
14
16


A modified protocol for the detection of three different mRNAs with a new-generation in situ hybridization chain reaction on frozen sections.
Qian-Qian Sui, Jiao Zhu, Xiangnan Li, Gillian E Knight, Cheng He, Geoffrey Burnstock, Hongbin Yuan, Zhenghua Xiang. J Mol Histol 2016
5
20


Cellular Taxonomy of the Mouse Striatum as Revealed by Single-Cell RNA-Seq.
Ozgun Gokce, Geoffrey M Stanley, Barbara Treutlein, Norma F Neff, J Gray Camp, Robert C Malenka, Patrick E Rothwell, Marc V Fuccillo, Thomas C Südhof, Stephen R Quake. Cell Rep 2016
165
16

Moxd1 Is a Marker for Sexual Dimorphism in the Medial Preoptic Area, Bed Nucleus of the Stria Terminalis and Medial Amygdala.
Yousuke Tsuneoka, Shinji Tsukahara, Sachine Yoshida, Kenkichi Takase, Satoko Oda, Masaru Kuroda, Hiromasa Funato. Front Neuroanat 2017
12
16




Mutation-Independent Therapies for Retinal Diseases: Focus on Gene-Based Approaches.
Sabrina Carrella, Alessia Indrieri, Brunella Franco, Sandro Banfi. Front Neurosci 2020
3
33

miR-183/96/182 cluster is an important morphogenetic factor targeting PAX6 expression in differentiating human retinal organoids.
Lucie Peskova, Denisa Jurcikova, Tereza Vanova, Jan Krivanek, Michaela Capandova, Zuzana Sramkova, Jana Sebestikova, Magdalena Kolouskova, Hana Kotasova, Libor Streit,[...]. Stem Cells 2020
5
20

Genomic non-redundancy of the mir-183/96/182 cluster and its requirement for hair cell maintenance.
Joseph Fogerty, Ruben Stepanyan, Lauren T Cianciolo, Benjamin P Tooke, Brian D Perkins. Sci Rep 2019
4
25


Circular RNAs: a new frontier in the study of human diseases.
Yonghua Chen, Cheng Li, Chunlu Tan, Xubao Liu. J Med Genet 2016
154
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.