A citation-based method for searching scientific literature

Ngoc Ngo Yen Nguyen, Sung Soo Kim, Yong Hwa Jo. DNA Cell Biol 2020
Times Cited: 4







List of co-cited articles
2 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Mitochondrial mutations and mitoepigenetics: Focus on regulation of oxidative stress-induced responses in breast cancers.
Kuo Chen, Pengwei Lu, Narasimha M Beeraka, Olga A Sukocheva, SubbaRao V Madhunapantula, Junqi Liu, Mikhail Y Sinelnikov, Vladimir N Nikolenko, Kirill V Bulygin, Liudmila M Mikhaleva,[...]. Semin Cancer Biol 2020
9
50

Mechanisms of blue light-induced eye hazard and protective measures: a review.
Xinli Ouyang, Jing Yang, Zexin Hong, Yide Wu, Yongfang Xie, Guohui Wang. Biomed Pharmacother 2020
4
25


A combined functional annotation score for non-synonymous variants.
Margarida C Lopes, Chris Joyce, Graham R S Ritchie, Sally L John, Fiona Cunningham, Jennifer Asimit, Eleftheria Zeggini. Hum Hered 2012
67
25

Plasticity of Mitochondrial Translation.
Sven Dennerlein, Cong Wang, Peter Rehling. Trends Cell Biol 2017
20
25

GLO1 gene polymorphisms and their association with retinitis pigmentosa: a case-control study in a Sicilian population.
Luigi Donato, Concetta Scimone, Giacomo Nicocia, Lucia Denaro, Renato Robledo, Antonina Sidoti, Rosalia D'Angelo. Mol Biol Rep 2018
25
25

ClueGO: a Cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks.
Gabriela Bindea, Bernhard Mlecnik, Hubert Hackl, Pornpimol Charoentong, Marie Tosolini, Amos Kirilovsky, Wolf-Herman Fridman, Franck Pagès, Zlatko Trajanoski, Jérôme Galon. Bioinformatics 2009
25

Toxicity of blue led light and A2E is associated to mitochondrial dynamics impairment in ARPE-19 cells: implications for age-related macular degeneration.
Agustina Alaimo, Guadalupe García Liñares, Juan Marco Bujjamer, Roxana Mayra Gorojod, Soledad Porte Alcon, Jimena Hebe Martínez, Alicia Baldessari, Hernán Edgardo Grecco, Mónica Lidia Kotler. Arch Toxicol 2019
19
25

MSeqDR mvTool: A mitochondrial DNA Web and API resource for comprehensive variant annotation, universal nomenclature collation, and reference genome conversion.
Lishuang Shen, Marcella Attimonelli, Renkui Bai, Marie T Lott, Douglas C Wallace, Marni J Falk, Xiaowu Gai. Hum Mutat 2018
11
25

Singlet oxygen induced DNA damage.
H Sies, C F Menck. Mutat Res 1992
157
25

dbSNP: the NCBI database of genetic variation.
S T Sherry, M H Ward, M Kholodov, J Baker, L Phan, E M Smigielski, K Sirotkin. Nucleic Acids Res 2001
25

MITOMAP: a human mitochondrial genome database--2004 update.
Marty C Brandon, Marie T Lott, Kevin Cuong Nguyen, Syawal Spolim, Shamkant B Navathe, Pierre Baldi, Douglas C Wallace. Nucleic Acids Res 2005
296
25

Predicting the pathogenicity of novel variants in mitochondrial tRNA with MitoTIP.
Sanjay Sonney, Jeremy Leipzig, Marie T Lott, Shiping Zhang, Vincent Procaccio, Douglas C Wallace, Neal Sondheimer. PLoS Comput Biol 2017
37
25



An enhanced MITOMAP with a global mtDNA mutational phylogeny.
Eduardo Ruiz-Pesini, Marie T Lott, Vincent Procaccio, Jason C Poole, Marty C Brandon, Dan Mishmar, Christina Yi, James Kreuziger, Pierre Baldi, Douglas C Wallace. Nucleic Acids Res 2007
411
25

Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data.
Konstantin Okonechnikov, Ana Conesa, Fernando García-Alcalde. Bioinformatics 2016
441
25


Rejuvenating cellular respiration for optimizing respiratory function: targeting mitochondria.
Anurag Agrawal, Ulaganathan Mabalirajan. Am J Physiol Lung Cell Mol Physiol 2016
36
25

FATHMM-XF: accurate prediction of pathogenic point mutations via extended features.
Mark F Rogers, Hashem A Shihab, Matthew Mort, David N Cooper, Tom R Gaunt, Colin Campbell. Bioinformatics 2018
105
25

Stargardt Phenotype Associated With Two ELOVL4 Promoter Variants and ELOVL4 Downregulation: New Possible Perspective to Etiopathogenesis?
Luigi Donato, Concetta Scimone, Carmela Rinaldi, Pasquale Aragona, Silvana Briuglia, Angela D'Ascola, Rosalia D'Angelo, Antonina Sidoti. Invest Ophthalmol Vis Sci 2018
32
25



Mitochondrial dysfunction in age-related macular degeneration: melatonin as a potential treatment.
Saeed Mehrzadi, Karim Hemati, Russel J Reiter, Azam Hosseinzadeh. Expert Opin Ther Targets 2020
17
25

EFIN: predicting the functional impact of nonsynonymous single nucleotide polymorphisms in human genome.
Shuai Zeng, Jing Yang, Brian Hon-Yin Chung, Yu Lung Lau, Wanling Yang. BMC Genomics 2014
14
25

Mitochondrial DNA haplogroups associated with age-related macular degeneration.
Nitin Udar, Shari R Atilano, Masood Memarzadeh, David S Boyer, Marilyn Chwa, Stephanie Lu, Barak Maguen, Jonathan Langberg, Pinar Coskun, Douglas C Wallace,[...]. Invest Ophthalmol Vis Sci 2009
82
25

ClinVar: improving access to variant interpretations and supporting evidence.
Melissa J Landrum, Jennifer M Lee, Mark Benson, Garth R Brown, Chen Chao, Shanmuga Chitipiralla, Baoshan Gu, Jennifer Hart, Douglas Hoffman, Wonhee Jang,[...]. Nucleic Acids Res 2018
815
25

Mitochondrial transport mediates survival of retinal ganglion cells in affected LHON patients.
Tien-Chun Yang, Aliaksandr A Yarmishyn, Yi-Ping Yang, Pin-Chen Lu, Shih-Jie Chou, Mong-Lien Wang, Tai-Chi Lin, De-Kuang Hwang, Yu-Bai Chou, Shih-Jen Chen,[...]. Hum Mol Genet 2020
7
25

DEOGEN2: prediction and interactive visualization of single amino acid variant deleteriousness in human proteins.
Daniele Raimondi, Ibrahim Tanyalcin, Julien Ferté, Andrea Gazzo, Gabriele Orlando, Tom Lenaerts, Marianne Rooman, Wim Vranken. Nucleic Acids Res 2017
30
25

Light action spectrum on oxidative stress and mitochondrial damage in A2E-loaded retinal pigment epithelium cells.
Mélanie Marie, Karine Bigot, Claire Angebault, Coralie Barrau, Pauline Gondouin, Delphine Pagan, Stéphane Fouquet, Thierry Villette, José-Alain Sahel, Guy Lenaers,[...]. Cell Death Dis 2018
37
25

Cytoscape: a software environment for integrated models of biomolecular interaction networks.
Paul Shannon, Andrew Markiel, Owen Ozier, Nitin S Baliga, Jonathan T Wang, Daniel Ramage, Nada Amin, Benno Schwikowski, Trey Ideker. Genome Res 2003
25


Discovery of GLO1 New Related Genes and Pathways by RNA-Seq on A2E-Stressed Retinal Epithelial Cells Could Improve Knowledge on Retinitis Pigmentosa.
Luigi Donato, Concetta Scimone, Simona Alibrandi, Giacomo Nicocia, Carmela Rinaldi, Antonina Sidoti, Rosalia D'Angelo. Antioxidants (Basel) 2020
27
25

Statistical Mitogenome Assembly with RepeaTs.
Fahad Alqahtani, Ion I Măndoiu. J Comput Biol 2020
1
100

Improving the prediction of the functional impact of cancer mutations by baseline tolerance transformation.
Abel Gonzalez-Perez, Jordi Deu-Pons, Nuria Lopez-Bigas. Genome Med 2012
60
25

Mitochondrial and endoplasmic reticulum stress-induced apoptotic pathways are activated by 5-aminolevulinic acid-based photodynamic therapy in HL60 leukemia cells.
Dana Grebenová, Katerina Kuzelová, Karel Smetana, Michaela Pluskalová, Hana Cajthamlová, Iuri Marinov, Ota Fuchs, Josef Soucek, Petr Jarolím, Zbynek Hrkal. J Photochem Photobiol B 2003
82
25

Machine learning classifier for identification of damaging missense mutations exclusive to human mitochondrial DNA-encoded polypeptides.
Antonio Martín-Navarro, Andrés Gaudioso-Simón, Jorge Álvarez-Jarreta, Julio Montoya, Elvira Mayordomo, Eduardo Ruiz-Pesini. BMC Bioinformatics 2017
12
25

CADD: predicting the deleteriousness of variants throughout the human genome.
Philipp Rentzsch, Daniela Witten, Gregory M Cooper, Jay Shendure, Martin Kircher. Nucleic Acids Res 2019
773
25

Evaluating heteroplasmic variations of the mitochondrial genome from whole genome sequencing data.
Mengqin Duan, Liang Chen, Qinyu Ge, Na Lu, Junji Li, Xuan Pan, Yi Qiao, Jing Tu, Zuhong Lu. Gene 2019
13
25

Mechanisms of mitochondrial dysfunction and their impact on age-related macular degeneration.
Kai Kaarniranta, Hannu Uusitalo, Janusz Blasiak, Szabolcs Felszeghy, Ram Kannan, Anu Kauppinen, Antero Salminen, Debasish Sinha, Deborah Ferrington. Prog Retin Eye Res 2020
43
25

Oxidized, deaminated cytosines are a source of C --> T transitions in vivo.
D A Kreutzer, J M Essigmann. Proc Natl Acad Sci U S A 1998
212
25

HmtVar: a new resource for human mitochondrial variations and pathogenicity data.
Roberto Preste, Ornella Vitale, Rosanna Clima, Giuseppe Gasparre, Marcella Attimonelli. Nucleic Acids Res 2019
19
25

Introns as mobile genetic elements.
A M Lambowitz, M Belfort. Annu Rev Biochem 1993
515
25

Depletion of Mitochondrial DNA in Differentiated Retinal Pigment Epithelial Cells.
Xinqian Hu, Melissa A Calton, Shibo Tang, Douglas Vollrath. Sci Rep 2019
4
25


A novel RLBP1 gene geographical area-related mutation present in a young patient with retinitis punctata albescens.
Concetta Scimone, Luigi Donato, Teresa Esposito, Carmela Rinaldi, Rosalia D'Angelo, Antonina Sidoti. Hum Genomics 2017
20
25

CONDEL: Detecting Copy Number Variation and Genotyping Deletion Zygosity from Single Tumor Samples Using Sequence Data.
Xiguo Yuan, Jun Bai, Junying Zhang, Liying Yang, Junbo Duan, Yaoyao Li, Meihong Gao. IEEE/ACM Trans Comput Biol Bioinform 2020
15
25

Oxy radicals, lipid peroxidation and DNA damage.
Lawrence J Marnett. Toxicology 2002
327
25

SNAP predicts effect of mutations on protein function.
Yana Bromberg, Guy Yachdav, Burkhard Rost. Bioinformatics 2008
147
25


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.