A citation-based method for searching scientific literature

Jennifer Ann Black, Kathryn Crouch, Leandro Lemgruber, Craig Lapsley, Nicholas Dickens, Luiz R O Tosi, Jeremy C Mottram, Richard McCulloch. Cell Rep 2020
Times Cited: 7







List of co-cited articles
82 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Genome organization and DNA accessibility control antigenic variation in trypanosomes.
Laura S M Müller, Raúl O Cosentino, Konrad U Förstner, Julien Guizetti, Carolin Wedel, Noam Kaplan, Christian J Janzen, Panagiota Arampatzi, Jörg Vogel, Sascha Steinbiss,[...]. Nature 2018
49
71

Persistent DNA Damage Foci and DNA Replication with a Broken Chromosome in the African Trypanosome.
Lucy Glover, Catarina A Marques, Olga Suska, David Horn. mBio 2019
12
57

DNA repair pathways in trypanosomatids: from DNA repair to drug resistance.
Marie-Michelle Genois, Eric R Paquet, Marie-Claude N Laffitte, Ranjan Maity, Amélie Rodrigue, Marc Ouellette, Jean-Yves Masson. Microbiol Mol Biol Rev 2014
50
57

Trypanosomal histone γH2A and the DNA damage response.
Lucy Glover, David Horn. Mol Biochem Parasitol 2012
60
57

Chromosomal Translocations in the Parasite Leishmania by a MRE11/RAD50-Independent Microhomology-Mediated End Joining Mechanism.
Marie-Claude N Laffitte, Philippe Leprohon, Maripier Hainse, Danielle Légaré, Jean-Yves Masson, Marc Ouellette. PLoS Genet 2016
14
57

Trypanosoma brucei ribonuclease H2A is an essential R-loop processing enzyme whose loss causes DNA damage during transcription initiation and antigenic variation.
Emma Briggs, Kathryn Crouch, Leandro Lemgruber, Graham Hamilton, Craig Lapsley, Richard McCulloch. Nucleic Acids Res 2019
9
57

Ribonuclease H1-targeted R-loops in surface antigen gene expression sites can direct trypanosome immune evasion.
Emma Briggs, Kathryn Crouch, Leandro Lemgruber, Craig Lapsley, Richard McCulloch. PLoS Genet 2018
21
57

Evaluation of mechanisms that may generate DNA lesions triggering antigenic variation in African trypanosomes.
Marcelo Santos da Silva, Galadriel A Hovel-Miner, Emma M Briggs, Maria Carolina Elias, Richard McCulloch. PLoS Pathog 2018
12
57

Ku heterodimer-independent end joining in Trypanosoma brucei cell extracts relies upon sequence microhomology.
Peter Burton, David J McBride, Jonathan M Wilkes, J David Barry, Richard McCulloch. Eukaryot Cell 2007
42
57

Functional compartmentalization of Rad9 and Hus1 reveals diverse assembly of the 9-1-1 complex components during the DNA damage response in Leishmania.
Jeziel D Damasceno, Ricardo Obonaga, Elaine V Santos, Alan Scott, Richard McCulloch, Luiz R O Tosi. Mol Microbiol 2016
18
42

Genome-wide and protein kinase-focused RNAi screens reveal conserved and novel damage response pathways in Trypanosoma brucei.
Jennifer A Stortz, Tiago D Serafim, Sam Alsford, Jonathan Wilkes, Fernando Fernandez-Cortes, Graham Hamilton, Emma Briggs, Leandro Lemgruber, David Horn, Jeremy C Mottram,[...]. PLoS Pathog 2017
21
42

Replication Protein A Presents Canonical Functions and Is Also Involved in the Differentiation Capacity of Trypanosoma cruzi.
Raphael Souza Pavani, Marcelo Santos da Silva, Carlos Alexandre Henrique Fernandes, Flavia Souza Morini, Christiane Bezerra Araujo, Marcos Roberto de Mattos Fontes, Osvaldo Augusto Sant'Anna, Carlos Renato Machado, Maria Isabel Cano, Stenio Perdigão Fragoso,[...]. PLoS Negl Trop Dis 2016
18
42

Selective human inhibitors of ATR and ATM render Leishmania major promastigotes sensitive to oxidative damage.
Raíssa Bernardes da Silva, Carlos Renato Machado, Aldo Rogelis Aquiles Rodrigues, André Luiz Pedrosa. PLoS One 2018
5
60

The in vivo and in vitro roles of Trypanosoma cruzi Rad51 in the repair of DNA double strand breaks and oxidative lesions.
Danielle Gomes Passos Silva, Selma da Silva Santos, Sheila C Nardelli, Isabela Cecília Mendes, Anna Cláudia Guimarães Freire, Bruno Marçal Repolês, Bruno Carvalho Resende, Héllida Marina Costa-Silva, Verônica Santana da Silva, Karla Andrade de Oliveira,[...]. PLoS Negl Trop Dis 2018
10
42

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania.
Matthew B Rogers, James D Hilley, Nicholas J Dickens, Jon Wilkes, Paul A Bates, Daniel P Depledge, David Harris, Yerim Her, Pawel Herzyk, Hideo Imamura,[...]. Genome Res 2011
255
42


Formation of linear amplicons with inverted duplications in Leishmania requires the MRE11 nuclease.
Marie-Claude N Laffitte, Marie-Michelle Genois, Angana Mukherjee, Danielle Légaré, Jean-Yves Masson, Marc Ouellette. PLoS Genet 2014
14
42

The genome of the African trypanosome Trypanosoma brucei.
Matthew Berriman, Elodie Ghedin, Christiane Hertz-Fowler, Gaëlle Blandin, Hubert Renauld, Daniella C Bartholomeu, Nicola J Lennard, Elisabet Caler, Nancy E Hamlin, Brian Haas,[...]. Science 2005
42

Chromosomal copy number variation reveals differential levels of genomic plasticity in distinct Trypanosoma cruzi strains.
João Luís Reis-Cunha, Gabriela F Rodrigues-Luiz, Hugo O Valdivia, Rodrigo P Baptista, Tiago A O Mendes, Guilherme Loss de Morais, Rafael Guedes, Andrea M Macedo, Caryn Bern, Robert H Gilman,[...]. BMC Genomics 2015
44
42

Distinct roles for two RAD51-related genes in Trypanosoma brucei antigenic variation.
Chris Proudfoot, Richard McCulloch. Nucleic Acids Res 2005
57
42


ATM phosphorylates histone H2AX in response to DNA double-strand breaks.
S Burma, B P Chen, M Murphy, A Kurimasa, D J Chen. J Biol Chem 2001
42



Antigenic variation in African trypanosomes.
David Horn. Mol Biochem Parasitol 2014
128
42

Causes and Effects of Loss of Classical Nonhomologous End Joining Pathway in Parasitic Eukaryotes.
Anna Nenarokova, Kristína Záhonová, Marija Krasilnikova, Ondřej Gahura, Richard McCulloch, Alena Zíková, Vyacheslav Yurchenko, Julius Lukeš. mBio 2019
9
42


Telomeric expression sites are highly conserved in Trypanosoma brucei.
Christiane Hertz-Fowler, Luisa M Figueiredo, Michael A Quail, Marion Becker, Andrew Jackson, Nathalie Bason, Karen Brooks, Carol Churcher, Samah Fahkro, Ian Goodhead,[...]. PLoS One 2008
172
42


Nuclear DNA replication initiation in kinetoplastid parasites: new insights into an ancient process.
Calvin Tiengwe, Catarina A Marques, Richard McCulloch. Trends Parasitol 2014
24
28

Single molecule analysis of Trypanosoma brucei DNA replication dynamics.
Simone Guedes Calderano, William C Drosopoulos, Marina Mônaco Quaresma, Catarina A Marques, Settapong Kosiyatrakul, Richard McCulloch, Carl L Schildkraut, Maria Carolina Elias. Nucleic Acids Res 2015
19
28


Genome-wide stochastic adaptive DNA amplification at direct and inverted DNA repeats in the parasite Leishmania.
Jean-Michel Ubeda, Frédéric Raymond, Angana Mukherjee, Marie Plourde, Hélène Gingras, Gaétan Roy, Andréanne Lapointe, Philippe Leprohon, Barbara Papadopoulou, Jacques Corbeil,[...]. PLoS Biol 2014
79
28

Conditional genome engineering reveals canonical and divergent roles for the Hus1 component of the 9-1-1 complex in the maintenance of the plastic genome of Leishmania.
Jeziel D Damasceno, Ricardo Obonaga, Gabriel L A Silva, João L Reis-Cunha, Samuel M Duncan, Daniella C Bartholomeu, Jeremy C Mottram, Richard McCulloch, Luiz R O Tosi. Nucleic Acids Res 2018
11
28

Trypanosomatids Are Much More than Just Trypanosomes: Clues from the Expanded Family Tree.
Julius Lukeš, Anzhelika Butenko, Hassan Hashimi, Dmitri A Maslov, Jan Votýpka, Vyacheslav Yurchenko. Trends Parasitol 2018
72
28

Monoallelic expression and epigenetic inheritance sustained by a Trypanosoma brucei variant surface glycoprotein exclusion complex.
Joana Faria, Lucy Glover, Sebastian Hutchinson, Cordula Boehm, Mark C Field, David Horn. Nat Commun 2019
16
28

Transcription activity contributes to the firing of non-constitutive origins in African trypanosomes helping to maintain robustness in S-phase duration.
Marcelo S da Silva, Gustavo R Cayres-Silva, Marcela O Vitarelli, Paula A Marin, Priscila M Hiraiwa, Christiane B Araújo, Bruno B Scholl, Andrea R Ávila, Richard McCulloch, Marcelo S Reis,[...]. Sci Rep 2019
6
33

VEX1 controls the allelic exclusion required for antigenic variation in trypanosomes.
Lucy Glover, Sebastian Hutchinson, Sam Alsford, David Horn. Proc Natl Acad Sci U S A 2016
49
28

Leishmania Genome Dynamics during Environmental Adaptation Reveal Strain-Specific Differences in Gene Copy Number Variation, Karyotype Instability, and Telomeric Amplification.
Giovanni Bussotti, Evi Gouzelou, Mariana Côrtes Boité, Ihcen Kherachi, Zoubir Harrat, Naouel Eddaikra, Jeremy C Mottram, Maria Antoniou, Vasiliki Christodoulou, Aymen Bali,[...]. mBio 2018
32
28

Roles of Rad51 paralogs for promoting homologous recombination in Leishmania infantum.
Marie-Michelle Genois, Marie Plourde, Chantal Éthier, Gaétan Roy, Guy G Poirier, Marc Ouellette, Jean-Yves Masson. Nucleic Acids Res 2015
14
28

Emerging challenges in understanding trypanosome antigenic variation.
Richard McCulloch, Christina A Cobbold, Luisa Figueiredo, Andrew Jackson, Liam J Morrison, Monica R Mugnier, Nina Papavasiliou, Achim Schnaufer, Keith Matthews. Emerg Top Life Sci 2017
14
28

Gene amplification in Leishmania.
S M Beverley. Annu Rev Microbiol 1991
193
28


Constitutive mosaic aneuploidy is a unique genetic feature widespread in the Leishmania genus.
Laurence Lachaud, Nathalie Bourgeois, Nada Kuk, Christelle Morelle, Lucien Crobu, Gilles Merlin, Patrick Bastien, Michel Pagès, Yvon Sterkers. Microbes Infect 2014
37
28


Telomere and Subtelomere R-loops and Antigenic Variation in Trypanosomes.
Arpita Saha, Vishal P Nanavaty, Bibo Li. J Mol Biol 2020
7
28


ATR Protects the Genome against R Loops through a MUS81-Triggered Feedback Loop.
Dominick A Matos, Jia-Min Zhang, Jian Ouyang, Hai Dang Nguyen, Marie-Michelle Genois, Lee Zou. Mol Cell 2020
31
28

Evolution of metabolic capabilities and molecular features of diplonemids, kinetoplastids, and euglenids.
Anzhelika Butenko, Fred R Opperdoes, Olga Flegontova, Aleš Horák, Vladimír Hampl, Patrick Keeling, Ryan M R Gawryluk, Denis Tikhonenkov, Pavel Flegontov, Julius Lukeš. BMC Biol 2020
16
28

Identification of a novel base J binding protein complex involved in RNA polymerase II transcription termination in trypanosomes.
Rudo Kieft, Yang Zhang, Alexandre P Marand, Jose Dagoberto Moran, Robert Bridger, Lance Wells, Robert J Schmitz, Robert Sabatini. PLoS Genet 2020
7
28


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.