A citation-based method for searching scientific literature

Emily Feng, Nicole L Batenburg, John R Walker, Angus Ho, Taylor R H Mitchell, Jian Qin, Xu-Dong Zhu. J Cell Sci 2020
Times Cited: 8







List of co-cited articles
44 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Suppression of the alternative lengthening of telomere pathway by the chromatin remodelling factor ATRX.
David Clynes, Clare Jelinska, Barbara Xella, Helena Ayyub, Caroline Scott, Matthew Mitson, Stephen Taylor, Douglas R Higgs, Richard J Gibbons. Nat Commun 2015
128
37

Double-strand break repair-independent role for BRCA2 in blocking stalled replication fork degradation by MRE11.
Katharina Schlacher, Nicole Christ, Nicolas Siaud, Akinori Egashira, Hong Wu, Maria Jasin. Cell 2011
682
25

Pooled CRISPR screening with single-cell transcriptome readout.
Paul Datlinger, André F Rendeiro, Christian Schmidl, Thomas Krausgruber, Peter Traxler, Johanna Klughammer, Linda C Schuster, Amelie Kuchler, Donat Alpar, Christoph Bock. Nat Methods 2017
272
25

Strand break-induced replication fork collapse leads to C-circles, C-overhangs and telomeric recombination.
Tianpeng Zhang, Zepeng Zhang, Gong Shengzhao, Xiaocui Li, Haiying Liu, Yong Zhao. PLoS Genet 2019
20
25

Mammalian RAD52 Functions in Break-Induced Replication Repair of Collapsed DNA Replication Forks.
Sotirios K Sotiriou, Irene Kamileri, Natalia Lugli, Konstantinos Evangelou, Caterina Da-Ré, Florian Huber, Laura Padayachy, Sebastien Tardy, Noemie L Nicati, Samia Barriot,[...]. Mol Cell 2016
142
25

Break-induced DNA replication.
Ranjith P Anand, Susan T Lovett, James E Haber. Cold Spring Harb Perspect Biol 2013
141
25

RAD52 Facilitates Mitotic DNA Synthesis Following Replication Stress.
Rahul Bhowmick, Sheroy Minocherhomji, Ian D Hickson. Mol Cell 2016
164
25

PRIMPOL-Mediated Adaptive Response Suppresses Replication Fork Reversal in BRCA-Deficient Cells.
Annabel Quinet, Stephanie Tirman, Jessica Jackson, Saša Šviković, Delphine Lemaçon, Denisse Carvajal-Maldonado, Daniel González-Acosta, Alexandre T Vessoni, Emily Cybulla, Matthew Wood,[...]. Mol Cell 2020
42
25

SMARCAL1 Resolves Replication Stress at ALT Telomeres.
Kelli E Cox, Alexandre Maréchal, Rachel Litman Flynn. Cell Rep 2016
49
25

Alternative Lengthening of Telomeres and Loss of DAXX/ATRX Expression Predicts Metastatic Disease and Poor Survival in Patients with Pancreatic Neuroendocrine Tumors.
Aatur D Singhi, Ta-Chiang Liu, Justin L Roncaioli, Dengfeng Cao, Herbert J Zeh, Amer H Zureikat, Allan Tsung, J Wallis Marsh, Kenneth K Lee, Melissa E Hogg,[...]. Clin Cancer Res 2017
96
25

ATRX loss induces multiple hallmarks of the alternative lengthening of telomeres (ALT) phenotype in human glioma cell lines in a cell line-specific manner.
Jacqueline A Brosnan-Cashman, Ming Yuan, Mindy K Graham, Anthony J Rizzo, Kaylar M Myers, Christine Davis, Rebecca Zhang, David M Esopi, Eric H Raabe, Charles G Eberhart,[...]. PLoS One 2018
16
25

Alternative lengthening of telomeres phenotype in malignant vascular tumors is highly associated with loss of ATRX expression and is frequently observed in hepatic angiosarcomas.
Jau-Yu Liau, Jia-Huei Tsai, Ching-Yao Yang, Jen-Chieh Lee, Cher-Wei Liang, Hung-Han Hsu, Yung-Ming Jeng. Hum Pathol 2015
29
25

Perturb-Seq: Dissecting Molecular Circuits with Scalable Single-Cell RNA Profiling of Pooled Genetic Screens.
Atray Dixit, Oren Parnas, Biyu Li, Jenny Chen, Charles P Fulco, Livnat Jerby-Arnon, Nemanja D Marjanovic, Danielle Dionne, Tyler Burks, Raktima Raychowdhury,[...]. Cell 2016
426
25

Break-induced telomere synthesis underlies alternative telomere maintenance.
Robert L Dilley, Priyanka Verma, Nam Woo Cho, Harrison D Winters, Anne R Wondisford, Roger A Greenberg. Nature 2016
194
25

The genomic landscape of TERT promoter wildtype-IDH wildtype glioblastoma.
Bill H Diplas, Xujun He, Jacqueline A Brosnan-Cashman, Heng Liu, Lee H Chen, Zhaohui Wang, Casey J Moure, Patrick J Killela, Daniel B Loriaux, Eric S Lipp,[...]. Nat Commun 2018
62
25

SMARCAL1 catalyzes fork regression and Holliday junction migration to maintain genome stability during DNA replication.
Rémy Bétous, Aaron C Mason, Robert P Rambo, Carol E Bansbach, Akosua Badu-Nkansah, Bianca M Sirbu, Brandt F Eichman, David Cortez. Genes Dev 2012
175
25

SMARCAL1 maintains telomere integrity during DNA replication.
Lisa A Poole, Runxiang Zhao, Gloria G Glick, Courtney A Lovejoy, Christine M Eischen, David Cortez. Proc Natl Acad Sci U S A 2015
43
25

Alternative lengthening of telomeres and loss of ATRX are frequent events in pleomorphic and dedifferentiated liposarcomas.
Jen-Chieh Lee, Yung-Ming Jeng, Jau-Yu Liau, Jia-Huei Tsai, Hung-Han Hsu, Ching-Yao Yang. Mod Pathol 2015
33
25

Break-induced replication repair of damaged forks induces genomic duplications in human cells.
Lorenzo Costantino, Sotirios K Sotiriou, Juha K Rantala, Simon Magin, Emil Mladenov, Thomas Helleday, James E Haber, George Iliakis, Olli P Kallioniemi, Thanos D Halazonetis. Science 2014
265
25

BRCA2 acts as a RAD51 loader to facilitate telomere replication and capping.
Sophie Badie, Jose M Escandell, Peter Bouwman, Ana Rita Carlos, Maria Thanasoula, Maria M Gallardo, Anitha Suram, Isabel Jaco, Javier Benitez, Utz Herbig,[...]. Nat Struct Mol Biol 2010
111
25


Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma.
Jeremy Schwartzentruber, Andrey Korshunov, Xiao-Yang Liu, David T W Jones, Elke Pfaff, Karine Jacob, Dominik Sturm, Adam M Fontebasso, Dong-Anh Khuong Quang, Martje Tönjes,[...]. Nature 2012
25

Spontaneous occurrence of telomeric DNA damage response in the absence of chromosome fusions.
Anthony J Cesare, Zeenia Kaul, Scott B Cohen, Christine E Napier, Hilda A Pickett, Axel A Neumann, Roger R Reddel. Nat Struct Mol Biol 2009
163
25

FANCM, BRCA1, and BLM cooperatively resolve the replication stress at the ALT telomeres.
Xiaolei Pan, William C Drosopoulos, Louisa Sethi, Advaitha Madireddy, Carl L Schildkraut, Dong Zhang. Proc Natl Acad Sci U S A 2017
49
25

Switch telomerase to ALT mechanism by inducing telomeric DNA damages and dysfunction of ATRX and DAXX.
Yang Hu, Guang Shi, Laichen Zhang, Feng Li, Yuanling Jiang, Shuai Jiang, Wenbin Ma, Yong Zhao, Zhou Songyang, Junjiu Huang. Sci Rep 2016
43
25

Alternative lengthening of telomeres: models, mechanisms and implications.
Anthony J Cesare, Roger R Reddel. Nat Rev Genet 2010
562
25

Apoptosis related to telomere instability and cell cycle alterations in human glioma cells treated by new highly selective G-quadruplex ligands.
Gaëlle Pennarun, Christine Granotier, Laurent R Gauthier, Dennis Gomez, Françoise Hoffschir, Eliane Mandine, Jean-François Riou, Jean-Louis Mergny, Patrick Mailliet, François D Boussin. Oncogene 2005
182
25

RNaseH1 regulates TERRA-telomeric DNA hybrids and telomere maintenance in ALT tumour cells.
Rajika Arora, Yongwoo Lee, Harry Wischnewski, Catherine M Brun, Tobias Schwarz, Claus M Azzalin. Nat Commun 2014
196
25

FANCM suppresses DNA replication stress at ALT telomeres by disrupting TERRA R-loops.
Xiaolei Pan, Yun Chen, Beena Biju, Naveed Ahmed, Joyce Kong, Marti Goldenberg, Judy Huang, Nandakumar Mohan, Stephanie Klosek, Kian Parsa,[...]. Sci Rep 2019
11
25

Altered telomeres in tumors with ATRX and DAXX mutations.
Christopher M Heaphy, Roeland F de Wilde, Yuchen Jiao, Alison P Klein, Barish H Edil, Chanjuan Shi, Chetan Bettegowda, Fausto J Rodriguez, Charles G Eberhart, Sachidanand Hebbar,[...]. Science 2011
623
25

BRCA2 Regulates Transcription Elongation by RNA Polymerase II to Prevent R-Loop Accumulation.
Mahmud K K Shivji, Xavier Renaudin, Çiğdem H Williams, Ashok R Venkitaraman. Cell Rep 2018
58
25

DAXX/ATRX, MEN1, and mTOR pathway genes are frequently altered in pancreatic neuroendocrine tumors.
Yuchen Jiao, Chanjuan Shi, Barish H Edil, Roeland F de Wilde, David S Klimstra, Anirban Maitra, Richard D Schulick, Laura H Tang, Christopher L Wolfgang, Michael A Choti,[...]. Science 2011
25

ATRX represses alternative lengthening of telomeres.
Christine E Napier, Lily I Huschtscha, Adam Harvey, Kylie Bower, Jane R Noble, Eric A Hendrickson, Roger R Reddel. Oncotarget 2015
79
25

SLX4IP Antagonizes Promiscuous BLM Activity during ALT Maintenance.
Stephanie Panier, Marija Maric, Graeme Hewitt, Emily Mason-Osann, Himabindu Gali, Anqi Dai, Adam Labadorf, Jean-Hugues Guervilly, Philip Ruis, Sandra Segura-Bayona,[...]. Mol Cell 2019
27
25

Telomere maintenance by recombination in human cells.
M A Dunham, A A Neumann, C L Fasching, R R Reddel. Nat Genet 2000
645
25

Alternative Lengthening of Telomeres through Two Distinct Break-Induced Replication Pathways.
Jia-Min Zhang, Tribhuwan Yadav, Jian Ouyang, Li Lan, Lee Zou. Cell Rep 2019
82
25

Loss of ATRX, genome instability, and an altered DNA damage response are hallmarks of the alternative lengthening of telomeres pathway.
Courtney A Lovejoy, Wendi Li, Steven Reisenweber, Supawat Thongthip, Joanne Bruno, Titia de Lange, Saurav De, John H J Petrini, Patricia A Sung, Maria Jasin,[...]. PLoS Genet 2012
342
25

DNA C-circles are specific and quantifiable markers of alternative-lengthening-of-telomeres activity.
Jeremy D Henson, Ying Cao, Lily I Huschtscha, Andy C Chang, Amy Y M Au, Hilda A Pickett, Roger R Reddel. Nat Biotechnol 2009
264
25

Association of mutant TP53 with alternative lengthening of telomeres and favorable prognosis in glioma.
Yu-Jen Chen, Vicky Hakin-Smith, Mario Teo, George E Xinarianos, David A Jellinek, Thomas Carroll, David McDowell, Martin R MacFarlane, Ronald Boet, Bruce C Baguley,[...]. Cancer Res 2006
53
25

The FANCM-BLM-TOP3A-RMI complex suppresses alternative lengthening of telomeres (ALT).
Robert Lu, Julienne J O'Rourke, Alexander P Sobinoff, Joshua A M Allen, Christopher B Nelson, Christopher G Tomlinson, Michael Lee, Roger R Reddel, Andrew J Deans, Hilda A Pickett. Nat Commun 2019
44
25

Cockayne Syndrome group B protein interacts with TRF2 and regulates telomere length and stability.
Nicole L Batenburg, Taylor R H Mitchell, Derrik M Leach, Andrew J Rainbow, Xu-Dong Zhu. Nucleic Acids Res 2012
34
25

Human XPF controls TRF2 and telomere length maintenance through distinctive mechanisms.
Yili Wu, Taylor R H Mitchell, Xu-Dong Zhu. Mech Ageing Dev 2008
42
25

MRE11-RAD50-NBS1 and ATM function as co-mediators of TRF1 in telomere length control.
Yili Wu, Shujie Xiao, Xu-Dong Zhu. Nat Struct Mol Biol 2007
80
25

CSB cooperates with SMARCAL1 to maintain telomere stability in ALT cells.
Emily Feng, Nicole L Batenburg, John R Walker, Angus Ho, Taylor R H Mitchell, Jian Qin, Xu-Dong Zhu. J Cell Sci 2020
2
100

Visualization and interpretation of eukaryotic DNA replication intermediates in vivo by electron microscopy.
Kai J Neelsen, Arnab Ray Chaudhuri, Cindy Follonier, Raquel Herrador, Massimo Lopes. Methods Mol Biol 2014
41
12

Substrate-selective repair and restart of replication forks by DNA translocases.
Rémy Bétous, Frank B Couch, Aaron C Mason, Brandt F Eichman, Maria Manosas, David Cortez. Cell Rep 2013
100
12

Replication Fork Reversal: Players and Guardians.
Annabel Quinet, Delphine Lemaçon, Alessandro Vindigni. Mol Cell 2017
104
12

Smarcal1 promotes double-strand-break repair by nonhomologous end-joining.
Islam Shamima Keka, Mohiuddin, Yuko Maede, Md Maminur Rahman, Tetsushi Sakuma, Masamitsu Honma, Takashi Yamamoto, Shunichi Takeda, Hiroyuki Sasanuma. Nucleic Acids Res 2015
25
12

Strand invasion by HLTF as a mechanism for template switch in fork rescue.
Peter Burkovics, Marek Sebesta, David Balogh, Lajos Haracska, Lumir Krejci. Nucleic Acids Res 2014
43
12



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.