A citation-based method for searching scientific literature

Tim Božič, Matja Zalar, Boris Rogelj, Janez Plavec, Primož Šket. Molecules 2020
Times Cited: 4







List of co-cited articles
22 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Expanded GGGGCC hexanucleotide repeat in noncoding region of C9ORF72 causes chromosome 9p-linked FTD and ALS.
Mariely DeJesus-Hernandez, Ian R Mackenzie, Bradley F Boeve, Adam L Boxer, Matt Baker, Nicola J Rutherford, Alexandra M Nicholson, NiCole A Finch, Heather Flynn, Jennifer Adamson,[...]. Neuron 2011
100


C9orf72 nucleotide repeat structures initiate molecular cascades of disease.
Aaron R Haeusler, Christopher J Donnelly, Goran Periz, Eric A J Simko, Patrick G Shaw, Min-Sik Kim, Nicholas J Maragakis, Juan C Troncoso, Akhilesh Pandey, Rita Sattler,[...]. Nature 2014
543
75

A hexanucleotide repeat expansion in C9ORF72 is the cause of chromosome 9p21-linked ALS-FTD.
Alan E Renton, Elisa Majounie, Adrian Waite, Javier Simón-Sánchez, Sara Rollinson, J Raphael Gibbs, Jennifer C Schymick, Hannu Laaksovirta, John C van Swieten, Liisa Myllykangas,[...]. Neuron 2011
75

Characterization of DNA G-quadruplex species forming from C9ORF72 G4C2-expanded repeats associated with amyotrophic lateral sclerosis and frontotemporal lobar degeneration.
Primož Šket, Jure Pohleven, Anja Kovanda, Maja Štalekar, Vera Župunski, Matja Zalar, Janez Plavec, Boris Rogelj. Neurobiol Aging 2015
49
75

Anti-sense DNA d(GGCCCC)n expansions in C9ORF72 form i-motifs and protonated hairpins.
Anja Kovanda, Matja Zalar, Primož Šket, Janez Plavec, Boris Rogelj. Sci Rep 2015
45
75

Widespread binding of FUS along nascent RNA regulates alternative splicing in the brain.
Boris Rogelj, Laura E Easton, Gireesh K Bogu, Lawrence W Stanton, Gregor Rot, Tomaž Curk, Blaž Zupan, Yoichiro Sugimoto, Miha Modic, Nejc Haberman,[...]. Sci Rep 2012
178
50

Hexanucleotide repeats in ALS/FTD form length-dependent RNA foci, sequester RNA binding proteins, and are neurotoxic.
Youn-Bok Lee, Han-Jou Chen, João N Peres, Jorge Gomez-Deza, Jan Attig, Maja Stalekar, Claire Troakes, Agnes L Nishimura, Emma L Scotter, Caroline Vance,[...]. Cell Rep 2013
295
50

TDP-43 mutations in familial and sporadic amyotrophic lateral sclerosis.
Jemeen Sreedharan, Ian P Blair, Vineeta B Tripathi, Xun Hu, Caroline Vance, Boris Rogelj, Steven Ackerley, Jennifer C Durnall, Kelly L Williams, Emanuele Buratti,[...]. Science 2008
50

Amyotrophic lateral sclerosis.
Orla Hardiman, Ammar Al-Chalabi, Adriano Chio, Emma M Corr, Giancarlo Logroscino, Wim Robberecht, Pamela J Shaw, Zachary Simmons, Leonard H van den Berg. Nat Rev Dis Primers 2017
373
50

Unconventional translation of C9ORF72 GGGGCC expansion generates insoluble polypeptides specific to c9FTD/ALS.
Peter E A Ash, Kevin F Bieniek, Tania F Gendron, Thomas Caulfield, Wen-Lang Lin, Mariely Dejesus-Hernandez, Marka M van Blitterswijk, Karen Jansen-West, Joseph W Paul, Rosa Rademakers,[...]. Neuron 2013
680
50

Nuclear RNA foci from C9ORF72 expansion mutation form paraspeckle-like bodies.
Ana Bajc Česnik, Simona Darovic, Sonja Prpar Mihevc, Maja Štalekar, Mirjana Malnar, Helena Motaln, Youn-Bok Lee, Julija Mazej, Jure Pohleven, Markus Grosch,[...]. J Cell Sci 2019
16
50

Cross-Regulation between TDP-43 and Paraspeckles Promotes Pluripotency-Differentiation Transition.
Miha Modic, Markus Grosch, Gregor Rot, Silvia Schirge, Tjasa Lepko, Tomohiro Yamazaki, Flora C Y Lee, Ejona Rusha, Dmitry Shaposhnikov, Michael Palo,[...]. Mol Cell 2019
34
50

Converging mechanisms in ALS and FTD: disrupted RNA and protein homeostasis.
Shuo-Chien Ling, Magdalini Polymenidou, Don W Cleveland. Neuron 2013
892
50

RNA toxicity from the ALS/FTD C9ORF72 expansion is mitigated by antisense intervention.
Christopher J Donnelly, Ping-Wu Zhang, Jacqueline T Pham, Aaron R Haeusler, Nipun A Mistry, Svetlana Vidensky, Elizabeth L Daley, Erin M Poth, Benjamin Hoover, Daniel M Fines,[...]. Neuron 2013
570
50

The C9orf72 GGGGCC repeat is translated into aggregating dipeptide-repeat proteins in FTLD/ALS.
Kohji Mori, Shih-Ming Weng, Thomas Arzberger, Stephanie May, Kristin Rentzsch, Elisabeth Kremmer, Bettina Schmid, Hans A Kretzschmar, Marc Cruts, Christine Van Broeckhoven,[...]. Science 2013
769
50


Mutations in FUS, an RNA processing protein, cause familial amyotrophic lateral sclerosis type 6.
Caroline Vance, Boris Rogelj, Tibor Hortobágyi, Kurt J De Vos, Agnes Lumi Nishimura, Jemeen Sreedharan, Xun Hu, Bradley Smith, Deborah Ruddy, Paul Wright,[...]. Science 2009
50

G-quadruplex-binding small molecules ameliorate C9orf72 FTD/ALS pathology in vitro and in vivo.
Roberto Simone, Rubika Balendra, Thomas G Moens, Elisavet Preza, Katherine M Wilson, Amanda Heslegrave, Nathan S Woodling, Teresa Niccoli, Javier Gilbert-Jaramillo, Samir Abdelkarim,[...]. EMBO Mol Med 2018
93
50


C9orf72 hexanucleotide repeat associated with amyotrophic lateral sclerosis and frontotemporal dementia forms RNA G-quadruplexes.
Pietro Fratta, Sarah Mizielinska, Andrew J Nicoll, Mire Zloh, Elizabeth M C Fisher, Gary Parkinson, Adrian M Isaacs. Sci Rep 2012
210
50

The disease-associated r(GGGGCC)n repeat from the C9orf72 gene forms tract length-dependent uni- and multimolecular RNA G-quadruplex structures.
Kaalak Reddy, Bita Zamiri, Sabrina Y R Stanley, Robert B Macgregor, Christopher E Pearson. J Biol Chem 2013
208
50

A new subtype of frontotemporal lobar degeneration with FUS pathology.
Manuela Neumann, Rosa Rademakers, Sigrun Roeber, Matt Baker, Hans A Kretzschmar, Ian R A Mackenzie. Brain 2009
482
25

Spt4 selectively regulates the expression of C9orf72 sense and antisense mutant transcripts.
Nicholas J Kramer, Yari Carlomagno, Yong-Jie Zhang, Sandra Almeida, Casey N Cook, Tania F Gendron, Mercedes Prudencio, Marka Van Blitterswijk, Veronique Belzil, Julien Couthouis,[...]. Science 2016
78
25

C9orf72-mediated ALS and FTD: multiple pathways to disease.
Rubika Balendra, Adrian M Isaacs. Nat Rev Neurol 2018
197
25

p62 positive, TDP-43 negative, neuronal cytoplasmic and intranuclear inclusions in the cerebellum and hippocampus define the pathology of C9orf72-linked FTLD and MND/ALS.
Safa Al-Sarraj, Andrew King, Claire Troakes, Bradley Smith, Satomi Maekawa, Istvan Bodi, Boris Rogelj, Ammar Al-Chalabi, Tibor Hortobágyi, Christopher E Shaw. Acta Neuropathol 2011
345
25

Nuclear localization of MBNL1: splicing-mediated autoregulation and repression of repeat-derived aberrant proteins.
Yoshihiro Kino, Chika Washizu, Masaru Kurosawa, Yoko Oma, Nobutaka Hattori, Shoichi Ishiura, Nobuyuki Nukina. Hum Mol Genet 2015
38
25

TDP-43 aggregation mirrors TDP-43 knockdown, affecting the expression levels of a common set of proteins.
S Prpar Mihevc, Marco Baralle, Emanuele Buratti, Boris Rogelj. Sci Rep 2016
28
25

RNA-mediated toxicity in C9orf72 ALS and FTD.
Zachary T McEachin, Janani Parameswaran, Nisha Raj, Gary J Bassell, Jie Jiang. Neurobiol Dis 2020
4
25

NEAT1 long noncoding RNA regulates transcription via protein sequestration within subnuclear bodies.
Tetsuro Hirose, Giorgio Virnicchi, Akie Tanigawa, Takao Naganuma, Ruohan Li, Hiroshi Kimura, Takahide Yokoi, Shinichi Nakagawa, Marianne Bénard, Archa H Fox,[...]. Mol Biol Cell 2014
244
25

Long noncoding RNA NEAT1-dependent SFPQ relocation from promoter region to paraspeckle mediates IL8 expression upon immune stimuli.
Katsutoshi Imamura, Naoto Imamachi, Gen Akizuki, Michiko Kumakura, Atsushi Kawaguchi, Kyosuke Nagata, Akihisa Kato, Yasushi Kawaguchi, Hiroki Sato, Misako Yoneda,[...]. Mol Cell 2014
393
25

The Overlapping Genetics of Amyotrophic Lateral Sclerosis and Frontotemporal Dementia.
Yevgeniya A Abramzon, Pietro Fratta, Bryan J Traynor, Ruth Chia. Front Neurosci 2020
37
25

Differential Toxicity of Nuclear RNA Foci versus Dipeptide Repeat Proteins in a Drosophila Model of C9ORF72 FTD/ALS.
Helene Tran, Sandra Almeida, Jill Moore, Tania F Gendron, UmaDevi Chalasani, Yubing Lu, Xing Du, Jeffrey A Nickerson, Leonard Petrucelli, Zhiping Weng,[...]. Neuron 2015
130
25

The C9orf72 repeat expansion disrupts nucleocytoplasmic transport.
Ke Zhang, Christopher J Donnelly, Aaron R Haeusler, Jonathan C Grima, James B Machamer, Peter Steinwald, Elizabeth L Daley, Sean J Miller, Kathleen M Cunningham, Svetlana Vidensky,[...]. Nature 2015
547
25

SFPQ and Tau: critical factors contributing to rapid progression of Alzheimer's disease.
Neelam Younas, Saima Zafar, Mohsin Shafiq, Aneeqa Noor, Anna Siegert, Amandeep Singh Arora, Alexey Galkin, Ayesha Zafar, Mathias Schmitz, Christine Stadelmann,[...]. Acta Neuropathol 2020
12
25

A zebrafish model for C9orf72 ALS reveals RNA toxicity as a pathogenic mechanism.
Bart Swinnen, Andre Bento-Abreu, Tania F Gendron, Steven Boeynaems, Elke Bogaert, Rik Nuyts, Mieke Timmers, Wendy Scheveneels, Nicole Hersmus, Jiou Wang,[...]. Acta Neuropathol 2018
56
25

C9orf72 frontotemporal lobar degeneration is characterised by frequent neuronal sense and antisense RNA foci.
Sarah Mizielinska, Tammaryn Lashley, Frances E Norona, Emma L Clayton, Charlotte E Ridler, Pietro Fratta, Adrian M Isaacs. Acta Neuropathol 2013
197
25

Antisense oligonucleotide therapy for the treatment of C9ORF72 ALS/FTD diseases.
Giulietta Riboldi, Chiara Zanetta, Michela Ranieri, Monica Nizzardo, Chiara Simone, Francesca Magri, Nereo Bresolin, Giacomo P Comi, Stefania Corti. Mol Neurobiol 2014
37
25

Proteomic analyses reveal that loss of TDP-43 affects RNA processing and intracellular transport.
M Štalekar, X Yin, K Rebolj, S Darovic, C Troakes, M Mayr, C E Shaw, B Rogelj. Neuroscience 2015
35
25

ALS and FTD: Where RNA metabolism meets protein quality control.
Jessica Mandrioli, Laura Mediani, Simon Alberti, Serena Carra. Semin Cell Dev Biol 2020
17
25

Roles of PSF protein and VL30 RNA in reversible gene regulation.
Xu Song, Ying Sun, Alan Garen. Proc Natl Acad Sci U S A 2005
63
25

Sense-encoded poly-GR dipeptide repeat proteins correlate to neurodegeneration and uniquely co-localize with TDP-43 in dendrites of repeat-expanded C9orf72 amyotrophic lateral sclerosis.
Shahram Saberi, Jennifer E Stauffer, Jie Jiang, Sandra Diaz Garcia, Amy E Taylor, Derek Schulte, Takuya Ohkubo, Cheyenne L Schloffman, Marcus Maldonado, Michael Baughn,[...]. Acta Neuropathol 2018
82
25

An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles.
Christine M Clemson, John N Hutchinson, Sergio A Sara, Alexander W Ensminger, Archa H Fox, Andrew Chess, Jeanne B Lawrence. Mol Cell 2009
878
25

MENepsilon/beta noncoding RNAs are essential for structural integrity of nuclear paraspeckles.
Yasnory T F Sasaki, Takashi Ideue, Miho Sano, Toutai Mituyama, Tetsuro Hirose. Proc Natl Acad Sci U S A 2009
391
25

Intron retention and nuclear loss of SFPQ are molecular hallmarks of ALS.
Raphaelle Luisier, Giulia E Tyzack, Claire E Hall, Jamie S Mitchell, Helen Devine, Doaa M Taha, Bilal Malik, Ione Meyer, Linda Greensmith, Jia Newcombe,[...]. Nat Commun 2018
55
25

The Leukemogenic TCF3-HLF Complex Rewires Enhancers Driving Cellular Identity and Self-Renewal Conferring EP300 Vulnerability.
Yun Huang, Brice Mouttet, Hans-Jörg Warnatz, Thomas Risch, Fabian Rietmann, Fabian Frommelt, Quy A Ngo, Maria Pamela Dobay, Blerim Marovca, Silvia Jenni,[...]. Cancer Cell 2019
11
25

Role for PSF in mediating transcriptional activator-dependent stimulation of pre-mRNA processing in vivo.
Emanuel Rosonina, Joanna Y Y Ip, John A Calarco, Malina A Bakowski, Andrew Emili, Susan McCracken, Philip Tucker, C James Ingles, Benjamin J Blencowe. Mol Cell Biol 2005
94
25

Stress granules as crucibles of ALS pathogenesis.
Yun R Li, Oliver D King, James Shorter, Aaron D Gitler. J Cell Biol 2013
517
25

Kinesin transports RNA: isolation and characterization of an RNA-transporting granule.
Yoshimitsu Kanai, Naoshi Dohmae, Nobutaka Hirokawa. Neuron 2004
768
25



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.