A citation-based method for searching scientific literature

Luz D Orozco, Hsu-Hsin Chen, Christian Cox, Kenneth J Katschke, Rommel Arceo, Carmina Espiritu, Patrick Caplazi, Sarajane Saturnio Nghiem, Ying-Jiun Chen, Zora Modrusan, Amy Dressen, Leonard D Goldstein, Christine Clarke, Tushar Bhangale, Brian Yaspan, Marion Jeanne, Michael J Townsend, Menno van Lookeren Campagne, Jason A Hackney. Cell Rep 2020
Times Cited: 69







List of co-cited articles
673 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


A large genome-wide association study of age-related macular degeneration highlights contributions of rare and common variants.
Lars G Fritsche, Wilmar Igl, Jessica N Cooke Bailey, Felix Grassmann, Sebanti Sengupta, Jennifer L Bragg-Gresham, Kathryn P Burdon, Scott J Hebbring, Cindy Wen, Mathias Gorski,[...]. Nat Genet 2016
767
46

Single-cell transcriptomic atlas of the human retina identifies cell types associated with age-related macular degeneration.
Madhvi Menon, Shahin Mohammadi, Jose Davila-Velderrain, Brittany A Goods, Tanina D Cadwell, Yu Xing, Anat Stemmer-Rachamimov, Alex K Shalek, John Christopher Love, Manolis Kellis,[...]. Nat Commun 2019
111
31

Retinal transcriptome and eQTL analyses identify genes associated with age-related macular degeneration.
Rinki Ratnapriya, Olukayode A Sosina, Margaret R Starostik, Madeline Kwicklis, Rebecca J Kapphahn, Lars G Fritsche, Ashley Walton, Marios Arvanitis, Linn Gieser, Alexandra Pietraszkiewicz,[...]. Nat Genet 2019
102
30

Global prevalence of age-related macular degeneration and disease burden projection for 2020 and 2040: a systematic review and meta-analysis.
Wan Ling Wong, Xinyi Su, Xiang Li, Chui Ming G Cheung, Ronald Klein, Ching-Yu Cheng, Tien Yin Wong. Lancet Glob Health 2014
23

Complement factor H polymorphism in age-related macular degeneration.
Robert J Klein, Caroline Zeiss, Emily Y Chew, Jen-Yue Tsai, Richard S Sackler, Chad Haynes, Alice K Henning, John Paul SanGiovanni, Shrikant M Mane, Susan T Mayne,[...]. Science 2005
21

A single-cell transcriptome atlas of the adult human retina.
Samuel W Lukowski, Camden Y Lo, Alexei A Sharov, Quan Nguyen, Lyujie Fang, Sandy Sc Hung, Ling Zhu, Ting Zhang, Ulrike Grünert, Tu Nguyen,[...]. EMBO J 2019
102
21

Molecular characterization of foveal versus peripheral human retina by single-cell RNA sequencing.
A P Voigt, S S Whitmore, M J Flamme-Wiese, M J Riker, L A Wiley, B A Tucker, E M Stone, R F Mullins, T E Scheetz. Exp Eye Res 2019
60
25

Single-cell transcriptomics of the human retinal pigment epithelium and choroid in health and macular degeneration.
Andrew P Voigt, Kelly Mulfaul, Nathaniel K Mullin, Miles J Flamme-Wiese, Joseph C Giacalone, Edwin M Stone, Budd A Tucker, Todd E Scheetz, Robert F Mullins. Proc Natl Acad Sci U S A 2019
117
21

Molecular Classification and Comparative Taxonomics of Foveal and Peripheral Cells in Primate Retina.
Yi-Rong Peng, Karthik Shekhar, Wenjun Yan, Dustin Herrmann, Anna Sappington, Gregory S Bryman, Tavé van Zyl, Michael Tri H Do, Aviv Regev, Joshua R Sanes. Cell 2019
184
18

Cell Types of the Human Retina and Its Organoids at Single-Cell Resolution.
Cameron S Cowan, Magdalena Renner, Martina De Gennaro, Brigitte Gross-Scherf, David Goldblum, Yanyan Hou, Martin Munz, Tiago M Rodrigues, Jacek Krol, Tamas Szikra,[...]. Cell 2020
155
18

Complement factor H polymorphism and age-related macular degeneration.
Albert O Edwards, Robert Ritter, Kenneth J Abel, Alisa Manning, Carolien Panhuysen, Lindsay A Farrer. Science 2005
17

Single-nuclei RNA-seq on human retinal tissue provides improved transcriptome profiling.
Qingnan Liang, Rachayata Dharmat, Leah Owen, Akbar Shakoor, Yumei Li, Sangbae Kim, Albert Vitale, Ivana Kim, Denise Morgan, Shaoheng Liang,[...]. Nat Commun 2019
50
24

A common haplotype in the complement regulatory gene factor H (HF1/CFH) predisposes individuals to age-related macular degeneration.
Gregory S Hageman, Don H Anderson, Lincoln V Johnson, Lisa S Hancox, Andrew J Taiber, Lisa I Hardisty, Jill L Hageman, Heather A Stockman, James D Borchardt, Karen M Gehrs,[...]. Proc Natl Acad Sci U S A 2005
15

Complement factor H variant increases the risk of age-related macular degeneration.
Jonathan L Haines, Michael A Hauser, Silke Schmidt, William K Scott, Lana M Olson, Paul Gallins, Kylee L Spencer, Shu Ying Kwan, Maher Noureddine, John R Gilbert,[...]. Science 2005
15

Single-Cell Transcriptomic Comparison of Human Fetal Retina, hPSC-Derived Retinal Organoids, and Long-Term Retinal Cultures.
Akshayalakshmi Sridhar, Akina Hoshino, Connor R Finkbeiner, Alex Chitsazan, Li Dai, Alexandra K Haugan, Kayla M Eschenbacher, Dana L Jackson, Cole Trapnell, Olivia Bermingham-McDonogh,[...]. Cell Rep 2020
88
15

Cell Atlas of The Human Fovea and Peripheral Retina.
Wenjun Yan, Yi-Rong Peng, Tavé van Zyl, Aviv Regev, Karthik Shekhar, Dejan Juric, Joshua R Sanes. Sci Rep 2020
72
15

Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics.
Karthik Shekhar, Sylvain W Lapan, Irene E Whitney, Nicholas M Tran, Evan Z Macosko, Monika Kowalczyk, Xian Adiconis, Joshua Z Levin, James Nemesh, Melissa Goldman,[...]. Cell 2016
557
14

Rare variants in CFI, C3 and C9 are associated with high risk of advanced age-related macular degeneration.
Johanna M Seddon, Yi Yu, Elizabeth C Miller, Robyn Reynolds, Perciliz L Tan, Sivakumar Gowrisankar, Jacqueline I Goldstein, Michael Triebwasser, Holly E Anderson, Jennyfer Zerbib,[...]. Nat Genet 2013
246
13

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets.
Evan Z Macosko, Anindita Basu, Rahul Satija, James Nemesh, Karthik Shekhar, Melissa Goldman, Itay Tirosh, Allison R Bialas, Nolan Kamitaki, Emily M Martersteck,[...]. Cell 2015
13

A functional variant in the CFI gene confers a high risk of age-related macular degeneration.
Johannes P H van de Ven, Sara C Nilsson, Perciliz L Tan, Gabriëlle H S Buitendijk, Tina Ristau, Frida C Mohlin, Sander B Nabuurs, Frederieke E Schoenmaker-Koller, Dzenita Smailhodzic, Peter A Campochiaro,[...]. Nat Genet 2013
138
11

Dissecting the transcriptome landscape of the human fetal neural retina and retinal pigment epithelium by single-cell RNA-seq analysis.
Yuqiong Hu, Xiaoye Wang, Boqiang Hu, Yunuo Mao, Yidong Chen, Liying Yan, Jun Yong, Ji Dong, Yuan Wei, Wei Wang,[...]. PLoS Biol 2019
57
14

Single cell transcriptome profiling of retinal ganglion cells identifies cellular subtypes.
Bruce A Rheaume, Amyeo Jereen, Mohan Bolisetty, Muhammad S Sajid, Yue Yang, Kathleen Renna, Lili Sun, Paul Robson, Ephraim F Trakhtenberg. Nat Commun 2018
194
11

Seven new loci associated with age-related macular degeneration.
Lars G Fritsche, Wei Chen, Matthew Schu, Brian L Yaspan, Yi Yu, Gudmar Thorleifsson, Donald J Zack, Satoshi Arakawa, Valentina Cipriani, Stephan Ripke,[...]. Nat Genet 2013
571
11

Comprehensive Integration of Single-Cell Data.
Tim Stuart, Andrew Butler, Paul Hoffman, Christoph Hafemeister, Efthymia Papalexi, William M Mauck, Yuhan Hao, Marlon Stoeckius, Peter Smibert, Rahul Satija. Cell 2019
11

Age-related macular degeneration.
Paul Mitchell, Gerald Liew, Bamini Gopinath, Tien Y Wong. Lancet 2018
519
10

Genetic effects on gene expression across human tissues.
Alexis Battle, Christopher D Brown, Barbara E Engelhardt, Stephen B Montgomery. Nature 2017
10


Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
10

The neuronal organization of the retina.
Richard H Masland. Neuron 2012
505
10

Generation, transcriptome profiling, and functional validation of cone-rich human retinal organoids.
Sangbae Kim, Albert Lowe, Rachayata Dharmat, Seunghoon Lee, Leah A Owen, Jun Wang, Akbar Shakoor, Yumei Li, Denise J Morgan, Andre A Hejazi,[...]. Proc Natl Acad Sci U S A 2019
74
10

Deconstructing Retinal Organoids: Single Cell RNA-Seq Reveals the Cellular Components of Human Pluripotent Stem Cell-Derived Retina.
Joseph Collin, Rachel Queen, Darin Zerti, Birthe Dorgau, Rafiqul Hussain, Jonathan Coxhead, Simon Cockell, Majlinda Lako. Stem Cells 2019
58
12

Single-Cell Analysis of Human Retina Identifies Evolutionarily Conserved and Species-Specific Mechanisms Controlling Development.
Yufeng Lu, Fion Shiau, Wenyang Yi, Suying Lu, Qian Wu, Joel D Pearson, Alyssa Kallman, Suijuan Zhong, Thanh Hoang, Zhentao Zuo,[...]. Dev Cell 2020
72
10

Age-related macular degeneration.
Laurence S Lim, Paul Mitchell, Johanna M Seddon, Frank G Holz, Tien Y Wong. Lancet 2012
10

Age-related macular degeneration: genetics and biology coming together.
Lars G Fritsche, Robert N Fariss, Dwight Stambolian, Gonçalo R Abecasis, Christine A Curcio, Anand Swaroop. Annu Rev Genomics Hum Genet 2014
307
8

A rare penetrant mutation in CFH confers high risk of age-related macular degeneration.
Soumya Raychaudhuri, Oleg Iartchouk, Kimberly Chin, Perciliz L Tan, Albert K Tai, Stephan Ripke, Sivakumar Gowrisankar, Soumya Vemuri, Kate Montgomery, Yi Yu,[...]. Nat Genet 2011
236
8

Hypothetical LOC387715 is a second major susceptibility gene for age-related macular degeneration, contributing independently of complement factor H to disease risk.
Andrea Rivera, Sheila A Fisher, Lars G Fritsche, Claudia N Keilhauer, Peter Lichtner, Thomas Meitinger, Bernhard H F Weber. Hum Mol Genet 2005
610
8

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
8

Complement factor H binds malondialdehyde epitopes and protects from oxidative stress.
David Weismann, Karsten Hartvigsen, Nadine Lauer, Keiryn L Bennett, Hendrik P N Scholl, Peter Charbel Issa, Marisol Cano, Hubert Brandstätter, Sotirios Tsimikas, Christine Skerka,[...]. Nature 2011
375
8

A systems biology approach towards understanding and treating non-neovascular age-related macular degeneration.
James T Handa, Cathy Bowes Rickman, Andrew D Dick, Michael B Gorin, Joan W Miller, Cynthia A Toth, Marius Ueffing, Marco Zarbin, Lindsay A Farrer. Nat Commun 2019
124
8


Droplet barcoding for single-cell transcriptomics applied to embryonic stem cells.
Allon M Klein, Linas Mazutis, Ilke Akartuna, Naren Tallapragada, Adrian Veres, Victor Li, Leonid Peshkin, David A Weitz, Marc W Kirschner. Cell 2015
8


Integrative approaches for large-scale transcriptome-wide association studies.
Alexander Gusev, Arthur Ko, Huwenbo Shi, Gaurav Bhatia, Wonil Chung, Brenda W J H Penninx, Rick Jansen, Eco J C de Geus, Dorret I Boomsma, Fred A Wright,[...]. Nat Genet 2016
810
8

Bayesian test for colocalisation between pairs of genetic association studies using summary statistics.
Claudia Giambartolomei, Damjan Vukcevic, Eric E Schadt, Lude Franke, Aroon D Hingorani, Chris Wallace, Vincent Plagnol. PLoS Genet 2014
864
8

Systems-level analysis of age-related macular degeneration reveals global biomarkers and phenotype-specific functional networks.
Aaron M Newman, Natasha B Gallo, Lisa S Hancox, Norma J Miller, Carolyn M Radeke, Michelle A Maloney, James B Cooper, Gregory S Hageman, Don H Anderson, Lincoln V Johnson,[...]. Genome Med 2012
166
8


Single-Cell RNA-Seq Analysis of Retinal Development Identifies NFI Factors as Regulating Mitotic Exit and Late-Born Cell Specification.
Brian S Clark, Genevieve L Stein-O'Brien, Fion Shiau, Gabrielle H Cannon, Emily Davis-Marcisak, Thomas Sherman, Clayton P Santiago, Thanh V Hoang, Fatemeh Rajaii, Rebecca E James-Esposito,[...]. Neuron 2019
168
8

The dynamics and regulators of cell fate decisions are revealed by pseudotemporal ordering of single cells.
Cole Trapnell, Davide Cacchiarelli, Jonna Grimsby, Prapti Pokharel, Shuqiang Li, Michael Morse, Niall J Lennon, Kenneth J Livak, Tarjei S Mikkelsen, John L Rinn. Nat Biotechnol 2014
8

Genetic control of the alternative pathway of complement in humans and age-related macular degeneration.
Laura A Hecker, Albert O Edwards, Euijung Ryu, Nirubol Tosakulwong, Keith H Baratz, William L Brown, Peter Charbel Issa, Hendrik P Scholl, Beatrix Pollok-Kopp, Katharina E Schmid-Kubista,[...]. Hum Mol Genet 2010
123
8

Efficacy and Safety of Lampalizumab for Geographic Atrophy Due to Age-Related Macular Degeneration: Chroma and Spectri Phase 3 Randomized Clinical Trials.
Frank G Holz, Srinivas R Sadda, Brandon Busbee, Emily Y Chew, Paul Mitchell, Adnan Tufail, Christopher Brittain, Daniela Ferrara, Sarah Gray, Lee Honigberg,[...]. JAMA Ophthalmol 2018
177
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.