A citation-based method for searching scientific literature

Kenichi Yoshida, Kate H C Gowers, Henry Lee-Six, Deepak P Chandrasekharan, Tim Coorens, Elizabeth F Maughan, Kathryn Beal, Andrew Menzies, Fraser R Millar, Elizabeth Anderson, Sarah E Clarke, Adam Pennycuick, Ricky M Thakrar, Colin R Butler, Nobuyuki Kakiuchi, Tomonori Hirano, Robert E Hynds, Michael R Stratton, Iñigo Martincorena, Sam M Janes, Peter J Campbell. Nature 2020
Times Cited: 128







List of co-cited articles
869 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Tumor evolution. High burden and pervasive positive selection of somatic mutations in normal human skin.
Iñigo Martincorena, Amit Roshan, Moritz Gerstung, Peter Ellis, Peter Van Loo, Stuart McLaren, David C Wedge, Anthony Fullam, Ludmil B Alexandrov, Jose M Tubio,[...]. Science 2015
848
44

Somatic mutant clones colonize the human esophagus with age.
Iñigo Martincorena, Joanna C Fowler, Agnieszka Wabik, Andrew R J Lawson, Federico Abascal, Michael W J Hall, Alex Cagan, Kasumi Murai, Krishnaa Mahbubani, Michael R Stratton,[...]. Science 2018
404
43

The landscape of somatic mutation in normal colorectal epithelial cells.
Henry Lee-Six, Sigurgeir Olafsson, Peter Ellis, Robert J Osborne, Mathijs A Sanders, Luiza Moore, Nikitas Georgakopoulos, Franco Torrente, Ayesha Noorani, Martin Goddard,[...]. Nature 2019
193
36

Somatic mutations and clonal dynamics in healthy and cirrhotic human liver.
Simon F Brunner, Nicola D Roberts, Luke A Wylie, Luiza Moore, Sarah J Aitken, Susan E Davies, Mathijs A Sanders, Pete Ellis, Chris Alder, Yvette Hooks,[...]. Nature 2019
108
32

The mutational landscape of normal human endometrial epithelium.
Luiza Moore, Daniel Leongamornlert, Tim H H Coorens, Mathijs A Sanders, Peter Ellis, Stefan C Dentro, Kevin J Dawson, Tim Butler, Raheleh Rahbari, Thomas J Mitchell,[...]. Nature 2020
127
32

Age-related remodelling of oesophageal epithelia by mutated cancer drivers.
Akira Yokoyama, Nobuyuki Kakiuchi, Tetsuichi Yoshizato, Yasuhito Nannya, Hiromichi Suzuki, Yasuhide Takeuchi, Yusuke Shiozawa, Yusuke Sato, Kosuke Aoki, Soo Ki Kim,[...]. Nature 2019
239
29

The repertoire of mutational signatures in human cancer.
Ludmil B Alexandrov, Jaegil Kim, Nicholas J Haradhvala, Mi Ni Huang, Alvin Wei Tian Ng, Yang Wu, Arnoud Boot, Kyle R Covington, Dmitry A Gordenin, Erik N Bergstrom,[...]. Nature 2020
740
27

Tissue-specific mutation accumulation in human adult stem cells during life.
Francis Blokzijl, Joep de Ligt, Myrthe Jager, Valentina Sasselli, Sophie Roerink, Nobuo Sasaki, Meritxell Huch, Sander Boymans, Ewart Kuijk, Pjotr Prins,[...]. Nature 2016
460
24

Extensive heterogeneity in somatic mutation and selection in the human bladder.
Andrew R J Lawson, Federico Abascal, Tim H H Coorens, Yvette Hooks, Laura O'Neill, Calli Latimer, Keiran Raine, Mathijs A Sanders, Anne Y Warren, Krishnaa T A Mahbubani,[...]. Science 2020
57
38

Somatic Evolution in Non-neoplastic IBD-Affected Colon.
Sigurgeir Olafsson, Rebecca E McIntyre, Tim Coorens, Timothy Butler, Hyunchul Jung, Philip S Robinson, Henry Lee-Six, Mathijs A Sanders, Kenneth Arestang, Claire Dawson,[...]. Cell 2020
49
42

Age-related clonal hematopoiesis associated with adverse outcomes.
Siddhartha Jaiswal, Pierre Fontanillas, Jason Flannick, Alisa Manning, Peter V Grauman, Brenton G Mar, R Coleman Lindsley, Craig H Mermel, Noel Burtt, Alejandro Chavez,[...]. N Engl J Med 2014
20

Signatures of mutational processes in human cancer.
Ludmil B Alexandrov, Serena Nik-Zainal, David C Wedge, Samuel A J R Aparicio, Sam Behjati, Andrew V Biankin, Graham R Bignell, Niccolò Bolli, Ake Borg, Anne-Lise Børresen-Dale,[...]. Nature 2013
20

Population dynamics of normal human blood inferred from somatic mutations.
Henry Lee-Six, Nina Friesgaard Øbro, Mairi S Shepherd, Sebastian Grossmann, Kevin Dawson, Miriam Belmonte, Robert J Osborne, Brian J P Huntly, Inigo Martincorena, Elizabeth Anderson,[...]. Nature 2018
213
19

Somatic Mutations Increase Hepatic Clonal Fitness and Regeneration in Chronic Liver Disease.
Min Zhu, Tianshi Lu, Yuemeng Jia, Xin Luo, Purva Gopal, Lin Li, Mobolaji Odewole, Veronica Renteria, Amit G Singal, Younghoon Jang,[...]. Cell 2019
93
19

RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues.
Keren Yizhak, François Aguet, Jaegil Kim, Julian M Hess, Kirsten Kübler, Jonna Grimsby, Ruslana Frazer, Hailei Zhang, Nicholas J Haradhvala, Daniel Rosebrock,[...]. Science 2019
212
18

Aging and neurodegeneration are associated with increased mutations in single human neurons.
Michael A Lodato, Rachel E Rodin, Craig L Bohrson, Michael E Coulter, Alison R Barton, Minseok Kwon, Maxwell A Sherman, Carl M Vitzthum, Lovelace J Luquette, Chandri N Yandava,[...]. Science 2018
228
17


Universal Patterns of Selection in Cancer and Somatic Tissues.
Iñigo Martincorena, Keiran M Raine, Moritz Gerstung, Kevin J Dawson, Kerstin Haase, Peter Van Loo, Helen Davies, Michael R Stratton, Peter J Campbell. Cell 2017
468
17

Clock-like mutational processes in human somatic cells.
Ludmil B Alexandrov, Philip H Jones, David C Wedge, Julian E Sale, Peter J Campbell, Serena Nik-Zainal, Michael R Stratton. Nat Genet 2015
461
16

A Compendium of Mutational Signatures of Environmental Agents.
Jill E Kucab, Xueqing Zou, Sandro Morganella, Madeleine Joel, A Scott Nanda, Eszter Nagy, Celine Gomez, Andrea Degasperi, Rebecca Harris, Stephen P Jackson,[...]. Cell 2019
195
14

Mutational signatures associated with tobacco smoking in human cancer.
Ludmil B Alexandrov, Young Seok Ju, Kerstin Haase, Peter Van Loo, Iñigo Martincorena, Serena Nik-Zainal, Yasushi Totoki, Akihiro Fujimoto, Hidewaki Nakagawa, Tatsuhiro Shibata,[...]. Science 2016
491
14

Macroscopic somatic clonal expansion in morphologically normal human urothelium.
Ruoyan Li, Yiqing Du, Zhanghua Chen, Deshu Xu, Tianxin Lin, Shanzhao Jin, Gongwei Wang, Ziyang Liu, Min Lu, Xu Chen,[...]. Science 2020
46
30

Somatic mutation in cancer and normal cells.
Iñigo Martincorena, Peter J Campbell. Science 2015
509
13

Clonal hematopoiesis and blood-cancer risk inferred from blood DNA sequence.
Giulio Genovese, Anna K Kähler, Robert E Handsaker, Johan Lindberg, Samuel A Rose, Samuel F Bakhoum, Kimberly Chambert, Eran Mick, Benjamin M Neale, Menachem Fromer,[...]. N Engl J Med 2014
12

Clonal Expansion and Diversification of Cancer-Associated Mutations in Endometriosis and Normal Endometrium.
Kazuaki Suda, Hirofumi Nakaoka, Kosuke Yoshihara, Tatsuya Ishiguro, Ryo Tamura, Yutaro Mori, Kaoru Yamawaki, Sosuke Adachi, Tomoko Takahashi, Hiroaki Kase,[...]. Cell Rep 2018
150
11

Different mutational rates and mechanisms in human cells at pregastrulation and neurogenesis.
Taejeong Bae, Livia Tomasini, Jessica Mariani, Bo Zhou, Tanmoy Roychowdhury, Daniel Franjic, Mihovil Pletikos, Reenal Pattni, Bo-Juen Chen, Elisa Venturini,[...]. Science 2018
117
11

Mutational processes molding the genomes of 21 breast cancers.
Serena Nik-Zainal, Ludmil B Alexandrov, David C Wedge, Peter Van Loo, Christopher D Greenman, Keiran Raine, David Jones, Jonathan Hinton, John Marshall, Lucy A Stebbings,[...]. Cell 2012
11

The life history of 21 breast cancers.
Serena Nik-Zainal, Peter Van Loo, David C Wedge, Ludmil B Alexandrov, Christopher D Greenman, King Wai Lau, Keiran Raine, David Jones, John Marshall, Manasa Ramakrishna,[...]. Cell 2012
856
10

Spatial competition shapes the dynamic mutational landscape of normal esophageal epithelium.
Bartomeu Colom, Maria P Alcolea, Gabriel Piedrafita, Michael W J Hall, Agnieszka Wabik, Stefan C Dentro, Joanna C Fowler, Albert Herms, Charlotte King, Swee Hoe Ong,[...]. Nat Genet 2020
31
32


Deciphering the genomic, epigenomic, and transcriptomic landscapes of pre-invasive lung cancer lesions.
Vitor H Teixeira, Christodoulos P Pipinikas, Adam Pennycuick, Henry Lee-Six, Deepak Chandrasekharan, Jennifer Beane, Tiffany J Morris, Anna Karpathakis, Andrew Feber, Charles E Breeze,[...]. Nat Med 2019
95
10

Tracking the Evolution of Non-Small-Cell Lung Cancer.
Mariam Jamal-Hanjani, Gareth A Wilson, Nicholas McGranahan, Nicolai J Birkbak, Thomas B K Watkins, Selvaraju Veeriah, Seema Shafi, Diana H Johnson, Richard Mitter, Rachel Rosenthal,[...]. N Engl J Med 2017
10

Somatic mutations reveal asymmetric cellular dynamics in the early human embryo.
Young Seok Ju, Inigo Martincorena, Moritz Gerstung, Mia Petljak, Ludmil B Alexandrov, Raheleh Rahbari, David C Wedge, Helen R Davies, Manasa Ramakrishna, Anthony Fullam,[...]. Nature 2017
132
10

Reliable detection of somatic mutations in solid tissues by laser-capture microdissection and low-input DNA sequencing.
Peter Ellis, Luiza Moore, Mathijs A Sanders, Timothy M Butler, Simon F Brunner, Henry Lee-Six, Robert Osborne, Ben Farr, Tim H H Coorens, Andrew R J Lawson,[...]. Nat Protoc 2021
18
55

Somatic mutation landscapes at single-molecule resolution.
Federico Abascal, Luke M R Harvey, Emily Mitchell, Andrew R J Lawson, Stefanie V Lensing, Peter Ellis, Andrew J C Russell, Raul E Alcantara, Adrian Baez-Ortega, Yichen Wang,[...]. Nature 2021
46
21

Clonal Hematopoiesis and Risk of Atherosclerotic Cardiovascular Disease.
Siddhartha Jaiswal, Pradeep Natarajan, Alexander J Silver, Christopher J Gibson, Alexander G Bick, Eugenia Shvartz, Marie McConkey, Namrata Gupta, Stacey Gabriel, Diego Ardissino,[...]. N Engl J Med 2017
942
9

The evolutionary history of 2,658 cancers.
Moritz Gerstung, Clemency Jolly, Ignaty Leshchiner, Stefan C Dentro, Santiago Gonzalez, Daniel Rosebrock, Thomas J Mitchell, Yulia Rubanova, Pavana Anur, Kaixian Yu,[...]. Nature 2020
273
9

Hallmarks of cancer: the next generation.
Douglas Hanahan, Robert A Weinberg. Cell 2011
9

cgpCaVEManWrapper: Simple Execution of CaVEMan in Order to Detect Somatic Single Nucleotide Variants in NGS Data.
David Jones, Keiran M Raine, Helen Davies, Patrick S Tarpey, Adam P Butler, Jon W Teague, Serena Nik-Zainal, Peter J Campbell. Curr Protoc Bioinformatics 2016
81
11

The genomic landscapes of individual melanocytes from human skin.
Jessica Tang, Eleanor Fewings, Darwin Chang, Hanlin Zeng, Shanshan Liu, Aparna Jorapur, Rachel L Belote, Andrew S McNeal, Tuyet M Tan, Iwei Yeh,[...]. Nature 2020
31
29

Frequent mutations that converge on the NFKBIZ pathway in ulcerative colitis.
Nobuyuki Kakiuchi, Kenichi Yoshida, Motoi Uchino, Takako Kihara, Kotaro Akaki, Yoshikage Inoue, Kenji Kawada, Satoshi Nagayama, Akira Yokoyama, Shuji Yamamoto,[...]. Nature 2020
68
13

The evolutionary dynamics and fitness landscape of clonal hematopoiesis.
Caroline J Watson, A L Papula, Gladys Y P Poon, Wing H Wong, Andrew L Young, Todd E Druley, Daniel S Fisher, Jamie R Blundell. Science 2020
108
9

Clonal expansion in non-cancer tissues.
Nobuyuki Kakiuchi, Seishi Ogawa. Nat Rev Cancer 2021
28
32

Clonal hematopoiesis, with and without candidate driver mutations, is common in the elderly.
Florian Zink, Simon N Stacey, Gudmundur L Norddahl, Michael L Frigge, Olafur T Magnusson, Ingileif Jonsdottir, Thorgeir E Thorgeirsson, Asgeir Sigurdsson, Sigurjon A Gudjonsson, Julius Gudmundsson,[...]. Blood 2017
334
8

Clonal evolution in cancer.
Mel Greaves, Carlo C Maley. Nature 2012
8

A practical framework and online tool for mutational signature analyses show inter-tissue variation and driver dependencies.
Andrea Degasperi, Tauanne Dias Amarante, Jan Czarnecki, Scott Shooter, Xueqing Zou, Dominik Glodzik, Sandro Morganella, Arjun S Nanda, Cherif Badja, Gene Koh,[...]. Nat Cancer 2020
53
15


Somatic mutation in single human neurons tracks developmental and transcriptional history.
Michael A Lodato, Mollie B Woodworth, Semin Lee, Gilad D Evrony, Bhaven K Mehta, Amir Karger, Soohyun Lee, Thomas W Chittenden, Alissa M D'Gama, Xuyu Cai,[...]. Science 2015
303
8

Somatic inflammatory gene mutations in human ulcerative colitis epithelium.
Kosaku Nanki, Masayuki Fujii, Mariko Shimokawa, Mami Matano, Shingo Nishikori, Shoichi Date, Ai Takano, Kohta Toshimitsu, Yuki Ohta, Sirirat Takahashi,[...]. Nature 2020
78
10

Mutational signature in colorectal cancer caused by genotoxic pks+ E. coli.
Cayetano Pleguezuelos-Manzano, Jens Puschhof, Axel Rosendahl Huber, Arne van Hoeck, Henry M Wood, Jason Nomburg, Carino Gurjao, Freek Manders, Guillaume Dalmasso, Paul B Stege,[...]. Nature 2020
252
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.